RNA–Protein interactions for RNA: ENST00000493016.1

TSC22D1-208, Transcript of TSC22 domain family member 1, humanhuman

TSL 4

Gene TSC22D1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-208ENST00000493016 L3MBTL2Q969R5 705 aa23.56■■□□□ 1.36
TSC22D1-208ENST00000493016 EP400Q96L91 3159 aa23.54■■□□□ 1.36
TSC22D1-208ENST00000493016 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
TSC22D1-208ENST00000493016 CCDC61Q9Y6R9 512 aa23.54■■□□□ 1.36
TSC22D1-208ENST00000493016 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
TSC22D1-208ENST00000493016 POLR3AO14802 1390 aaPredicted RBP23.53■■□□□ 1.36
TSC22D1-208ENST00000493016 CENPJQ9HC77 1338 aaPredicted RBP23.53■■□□□ 1.36
TSC22D1-208ENST00000493016 TRPM1Q7Z4N2 1603 aa23.52■■□□□ 1.36
TSC22D1-208ENST00000493016 CCDC9Q9Y3X0 531 aaKnown RBP23.52■■□□□ 1.36
TSC22D1-208ENST00000493016 PLEKHG3A1L390 1219 aa23.51■■□□□ 1.35
TSC22D1-208ENST00000493016 ACEP12821 1306 aa23.51■■□□□ 1.35
TSC22D1-208ENST00000493016 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
TSC22D1-208ENST00000493016 BTG4Q9NY30 223 aa23.5■■□□□ 1.35
TSC22D1-208ENST00000493016 PHRF1Q9P1Y6 1649 aaKnown RBP23.5■■□□□ 1.35
TSC22D1-208ENST00000493016 ONECUT3O60422 494 aaPredicted RBP23.49■■□□□ 1.35
TSC22D1-208ENST00000493016 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
TSC22D1-208ENST00000493016 SEPT12Q8IYM1 358 aa23.49■■□□□ 1.35
TSC22D1-208ENST00000493016 SRPK2P78362 688 aaKnown RBP23.48■■□□□ 1.35
TSC22D1-208ENST00000493016 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
TSC22D1-208ENST00000493016 PPIP5K1Q6PFW1 1433 aa23.45■■□□□ 1.34
TSC22D1-208ENST00000493016 PRDM11Q9NQV5 511 aa23.45■■□□□ 1.34
TSC22D1-208ENST00000493016 NUTM2GQ5VZR2 741 aa23.44■■□□□ 1.34
TSC22D1-208ENST00000493016 CABP2Q9NPB3 220 aa23.44■■□□□ 1.34
TSC22D1-208ENST00000493016 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
TSC22D1-208ENST00000493016 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
TSC22D1-208ENST00000493016 ROCK2O75116 1388 aaKnown RBP23.41■■□□□ 1.34
TSC22D1-208ENST00000493016 KRT27Q7Z3Y8 459 aa23.41■■□□□ 1.34
TSC22D1-208ENST00000493016 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
TSC22D1-208ENST00000493016 SPATA31A5Q5VU36 1347 aa23.4■■□□□ 1.34
TSC22D1-208ENST00000493016 SPATA31A7Q8IWB4 1347 aa23.4■■□□□ 1.34
TSC22D1-208ENST00000493016 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
TSC22D1-208ENST00000493016 A0A0G2JS52 829 aa23.39■■□□□ 1.33
TSC22D1-208ENST00000493016 ZC3H6P61129 1189 aaKnown RBP23.39■■□□□ 1.33
TSC22D1-208ENST00000493016 MYT1Q01538 1121 aa23.39■■□□□ 1.33
TSC22D1-208ENST00000493016 NRKQ7Z2Y5 1582 aa23.39■■□□□ 1.33
TSC22D1-208ENST00000493016 CHRNA2Q15822 529 aa23.38■■□□□ 1.33
TSC22D1-208ENST00000493016 BRD4O60885 1362 aaPredicted RBP23.38■■□□□ 1.33
TSC22D1-208ENST00000493016 EVC2Q86UK5 1308 aa23.37■■□□□ 1.33
TSC22D1-208ENST00000493016 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
TSC22D1-208ENST00000493016 USP19O94966 1318 aa23.36■■□□□ 1.33
TSC22D1-208ENST00000493016 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
TSC22D1-208ENST00000493016 NLRP13Q86W25 1043 aa23.35■■□□□ 1.33
TSC22D1-208ENST00000493016 USP6P35125 1406 aa23.34■■□□□ 1.33
TSC22D1-208ENST00000493016 SF3B2Q13435 895 aaKnown RBP23.34■■□□□ 1.33
TSC22D1-208ENST00000493016 ZRANB1Q9UGI0 708 aa23.34■■□□□ 1.33
TSC22D1-208ENST00000493016 CPDO75976 1380 aa23.33■■□□□ 1.33
TSC22D1-208ENST00000493016 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.32
TSC22D1-208ENST00000493016 LMO7Q8WWI1 1683 aa23.32■■□□□ 1.32
TSC22D1-208ENST00000493016 STRN4Q9NRL3 753 aa23.32■■□□□ 1.32
TSC22D1-208ENST00000493016 AKAP12Q02952 1782 aa23.32■■□□□ 1.32
TSC22D1-208ENST00000493016 GCP02774 474 aa23.31■■□□□ 1.32
TSC22D1-208ENST00000493016 CAMTA1Q9Y6Y1 1673 aa23.31■■□□□ 1.32
TSC22D1-208ENST00000493016 DEFB132Q7Z7B7 95 aa23.3■■□□□ 1.32
TSC22D1-208ENST00000493016 EVA1CP58658 441 aa23.29■■□□□ 1.32
TSC22D1-208ENST00000493016 SSH2Q76I76 1423 aa23.29■■□□□ 1.32
TSC22D1-208ENST00000493016 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
TSC22D1-208ENST00000493016 RGPD1P0DJD0 1748 aa23.28■■□□□ 1.32
TSC22D1-208ENST00000493016 NLRP6P59044 892 aa23.27■■□□□ 1.32
TSC22D1-208ENST00000493016 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
TSC22D1-208ENST00000493016 SLIT3O75094 1523 aa23.27■■□□□ 1.32
TSC22D1-208ENST00000493016 TONSLQ96HA7 1378 aa23.27■■□□□ 1.31
TSC22D1-208ENST00000493016 ZNF692Q9BU19 519 aaPredicted RBP23.26■■□□□ 1.31
TSC22D1-208ENST00000493016 FAM182BQ5T319 152 aa23.25■■□□□ 1.31
TSC22D1-208ENST00000493016 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
TSC22D1-208ENST00000493016 USP35Q9P2H5 1018 aa23.25■■□□□ 1.31
TSC22D1-208ENST00000493016 SBNO2Q9Y2G9 1366 aa23.25■■□□□ 1.31
TSC22D1-208ENST00000493016 LARP1Q6PKG0 1096 aaKnown RBP23.24■■□□□ 1.31
TSC22D1-208ENST00000493016 BARGINQ6ZT62 677 aa23.23■■□□□ 1.31
TSC22D1-208ENST00000493016 BAG6P46379 1132 aa23.22■■□□□ 1.31
TSC22D1-208ENST00000493016 COL5A2P05997 1499 aaPredicted RBP23.22■■□□□ 1.31
TSC22D1-208ENST00000493016 TTC21BQ7Z4L5 1316 aa23.21■■□□□ 1.31
TSC22D1-208ENST00000493016 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
TSC22D1-208ENST00000493016 MON2Q7Z3U7 1717 aa23.21■■□□□ 1.31
TSC22D1-208ENST00000493016 TNS1Q9HBL0 1735 aaKnown RBP23.21■■□□□ 1.31
TSC22D1-208ENST00000493016 COL18A1P39060 1754 aa23.2■■□□□ 1.3
TSC22D1-208ENST00000493016 TCP11L2Q8N4U5 519 aa23.2■■□□□ 1.3
TSC22D1-208ENST00000493016 AATKQ6ZMQ8 1374 aa23.19■■□□□ 1.3
TSC22D1-208ENST00000493016 TTC21AQ8NDW8 1320 aa23.19■■□□□ 1.3
TSC22D1-208ENST00000493016 ZBTB7CA1YPR0 619 aa23.19■■□□□ 1.3
TSC22D1-208ENST00000493016 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
TSC22D1-208ENST00000493016 THRAP3Q9Y2W1 955 aaKnown RBP23.18■■□□□ 1.3
TSC22D1-208ENST00000493016 SRCAPQ6ZRS2 3230 aa23.18■■□□□ 1.3
TSC22D1-208ENST00000493016 RGPD5Q99666 1765 aa23.17■■□□□ 1.3
TSC22D1-208ENST00000493016 PARP4Q9UKK3 1724 aaKnown RBP23.17■■□□□ 1.3
TSC22D1-208ENST00000493016 FAM196AQ6ZSG2 479 aa23.17■■□□□ 1.3
TSC22D1-208ENST00000493016 CRB1P82279 1406 aa23.16■■□□□ 1.3
TSC22D1-208ENST00000493016 PDE3BQ13370 1112 aa23.15■■□□□ 1.3
TSC22D1-208ENST00000493016 KCNH5Q8NCM2 988 aa23.15■■□□□ 1.3
TSC22D1-208ENST00000493016 DISP2A7MBM2 1401 aa23.15■■□□□ 1.3
TSC22D1-208ENST00000493016 EN1Q05925 392 aaPredicted RBP23.14■■□□□ 1.29
TSC22D1-208ENST00000493016 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
TSC22D1-208ENST00000493016 ARHGEF25Q86VW2 580 aa23.12■■□□□ 1.29
TSC22D1-208ENST00000493016 USP54Q70EL1 1684 aa23.12■■□□□ 1.29
TSC22D1-208ENST00000493016 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
TSC22D1-208ENST00000493016 TRIM37O94972 964 aa23.11■■□□□ 1.29
TSC22D1-208ENST00000493016 AXIN2Q9Y2T1 843 aa23.11■■□□□ 1.29
TSC22D1-208ENST00000493016 NFAT5O94916 1531 aa23.11■■□□□ 1.29
TSC22D1-208ENST00000493016 SOX12O15370 315 aa23.1■■□□□ 1.29
TSC22D1-208ENST00000493016 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
TSC22D1-208ENST00000493016 TMC1Q8TDI8 760 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms