RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 FBXO31Q5XUX0 539 aaPredicted RBP8.85□□□□□ -0.99
ATP13A3-209ENST00000492983 RFC5P40937 340 aa8.84□□□□□ -0.99
ATP13A3-209ENST00000492983 PCDHB15Q9Y5E8 787 aa8.84□□□□□ -0.99
ATP13A3-209ENST00000492983 FAM181BA6NEQ2 426 aa8.83□□□□□ -1
ATP13A3-209ENST00000492983 NPAS3Q8IXF0 933 aa8.83□□□□□ -1
ATP13A3-209ENST00000492983 ZSCAN1Q8NBB4 408 aa8.83□□□□□ -1
ATP13A3-209ENST00000492983 NXF1Q9UBU9 619 aaKnown RBP8.83□□□□□ -1
ATP13A3-209ENST00000492983 NUTM2BA6NNL0 878 aaPredicted RBP8.82□□□□□ -1
ATP13A3-209ENST00000492983 NUTM2EB1AL46 878 aaPredicted RBP8.82□□□□□ -1
ATP13A3-209ENST00000492983 GUCA2AQ02747 115 aa8.82□□□□□ -1
ATP13A3-209ENST00000492983 QPCTQ16769 361 aa8.82□□□□□ -1
ATP13A3-209ENST00000492983 NUTM2DQ5VT03 806 aaPredicted RBP8.82□□□□□ -1
ATP13A3-209ENST00000492983 NUTM2AQ8IVF1 878 aaPredicted RBP8.82□□□□□ -1
ATP13A3-209ENST00000492983 HLA-CQ95604 372 aa8.82□□□□□ -1
ATP13A3-209ENST00000492983 HOXA2O43364 376 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 FDX1P10109 184 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 UBTFP17480 764 aaKnown RBP8.81□□□□□ -1
ATP13A3-209ENST00000492983 USP46P62068 366 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 SKOR1P84550 965 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 MCM6Q14566 821 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 CABLES1Q8TDN4 633 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 CLUAP1Q96AJ1 413 aa8.81□□□□□ -1
ATP13A3-209ENST00000492983 H3BM21 787 aa8.8□□□□□ -1
ATP13A3-209ENST00000492983 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
ATP13A3-209ENST00000492983 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
ATP13A3-209ENST00000492983 RTL5Q5HYW3 569 aaPredicted RBP8.79□□□□□ -1
ATP13A3-209ENST00000492983 LILRB3O75022 631 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 AP1G2O75843 785 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 PPP2R2DQ66LE6 453 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 SNRKQ9NRH2 765 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 ERBB4Q15303 1308 aa8.78□□□□□ -1
ATP13A3-209ENST00000492983 GJA5P36382 358 aa8.77□□□□□ -1.01
ATP13A3-209ENST00000492983 WNT7BP56706 349 aa8.77□□□□□ -1.01
ATP13A3-209ENST00000492983 TMEM259Q4ZIN3 620 aa8.77□□□□□ -1.01
ATP13A3-209ENST00000492983 RC3H1Q5TC82 1133 aaKnown RBP8.77□□□□□ -1.01
ATP13A3-209ENST00000492983 IRF7Q92985 503 aa8.77□□□□□ -1.01
ATP13A3-209ENST00000492983 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
ATP13A3-209ENST00000492983 HRCP23327 699 aa8.76□□□□□ -1.01
ATP13A3-209ENST00000492983 GRIPAP1Q4V328 841 aa8.76□□□□□ -1.01
ATP13A3-209ENST00000492983 ZBTB3Q9H5J0 574 aa8.76□□□□□ -1.01
ATP13A3-209ENST00000492983 SUZ12Q15022 739 aaKnown RBP8.75□□□□□ -1.01
ATP13A3-209ENST00000492983 BANK1Q8NDB2 785 aa8.75□□□□□ -1.01
ATP13A3-209ENST00000492983 TSC1Q92574 1164 aa8.75□□□□□ -1.01
ATP13A3-209ENST00000492983 POM121Q96HA1 1249 aa8.75□□□□□ -1.01
ATP13A3-209ENST00000492983 SPDYE5A6NIY4 337 aa8.74□□□□□ -1.01
ATP13A3-209ENST00000492983 ARID3CA6NKF2 412 aa8.74□□□□□ -1.01
ATP13A3-209ENST00000492983 C6orf229H3BNL8 230 aa8.74□□□□□ -1.01
ATP13A3-209ENST00000492983 SIAH2O43255 324 aa8.74□□□□□ -1.01
ATP13A3-209ENST00000492983 RAD21O60216 631 aa8.74□□□□□ -1.01
ATP13A3-209ENST00000492983 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
ATP13A3-209ENST00000492983 BMP1P13497 986 aa8.73□□□□□ -1.01
ATP13A3-209ENST00000492983 Q3C1V9 767 aa8.73□□□□□ -1.01
ATP13A3-209ENST00000492983 SYMPKQ92797 1274 aaKnown RBP8.73□□□□□ -1.01
ATP13A3-209ENST00000492983 GSK3AP49840 483 aa8.72□□□□□ -1.01
ATP13A3-209ENST00000492983 MTMR2Q13614 643 aa8.72□□□□□ -1.01
ATP13A3-209ENST00000492983 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
ATP13A3-209ENST00000492983 A6NJR5 290 aa8.71□□□□□ -1.02
ATP13A3-209ENST00000492983 VEGFBP49765 207 aa8.71□□□□□ -1.02
ATP13A3-209ENST00000492983 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
ATP13A3-209ENST00000492983 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
ATP13A3-209ENST00000492983 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
ATP13A3-209ENST00000492983 ARID3AQ99856 593 aa8.7□□□□□ -1.02
ATP13A3-209ENST00000492983 COG6Q9Y2V7 657 aa8.7□□□□□ -1.02
ATP13A3-209ENST00000492983 APBB1O00213 710 aa8.69□□□□□ -1.02
ATP13A3-209ENST00000492983 TRAK2O60296 914 aa8.69□□□□□ -1.02
ATP13A3-209ENST00000492983 ALDH1A1P00352 501 aa8.69□□□□□ -1.02
ATP13A3-209ENST00000492983 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
ATP13A3-209ENST00000492983 CFAP99D6REC4 459 aa8.68□□□□□ -1.02
ATP13A3-209ENST00000492983 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
ATP13A3-209ENST00000492983 GDPD2Q9HCC8 539 aa8.68□□□□□ -1.02
ATP13A3-209ENST00000492983 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
ATP13A3-209ENST00000492983 HELBQ8NG08 1087 aaPredicted RBP8.67□□□□□ -1.02
ATP13A3-209ENST00000492983 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
ATP13A3-209ENST00000492983 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
ATP13A3-209ENST00000492983 ABL2P42684 1182 aa8.66□□□□□ -1.02
ATP13A3-209ENST00000492983 ZNF777Q9ULD5 760 aaPredicted RBP8.66□□□□□ -1.02
ATP13A3-209ENST00000492983 LRRN4Q8WUT4 740 aa8.65□□□□□ -1.02
ATP13A3-209ENST00000492983 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
ATP13A3-209ENST00000492983 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
ATP13A3-209ENST00000492983 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
ATP13A3-209ENST00000492983 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
ATP13A3-209ENST00000492983 CCDC24Q8N4L8 307 aa8.63□□□□□ -1.03
ATP13A3-209ENST00000492983 ZFP42Q96MM3 310 aa8.63□□□□□ -1.03
ATP13A3-209ENST00000492983 HMX1Q9NP08 348 aaPredicted RBP8.63□□□□□ -1.03
ATP13A3-209ENST00000492983 JUNDP17535 347 aa8.62□□□□□ -1.03
ATP13A3-209ENST00000492983 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-209ENST00000492983 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-209ENST00000492983 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
ATP13A3-209ENST00000492983 ARXQ96QS3 562 aa8.61□□□□□ -1.03
ATP13A3-209ENST00000492983 PER1O15534 1290 aaPredicted RBP8.6□□□□□ -1.03
ATP13A3-209ENST00000492983 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
ATP13A3-209ENST00000492983 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
ATP13A3-209ENST00000492983 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
ATP13A3-209ENST00000492983 EPS8L1Q8TE68 723 aa8.59□□□□□ -1.03
ATP13A3-209ENST00000492983 NDUFB9Q9Y6M9 179 aa8.59□□□□□ -1.03
ATP13A3-209ENST00000492983 SH3BP2P78314 561 aa8.58□□□□□ -1.04
ATP13A3-209ENST00000492983 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
ATP13A3-209ENST00000492983 CCDC82Q8N4S0 544 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms