RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 MAGI1Q96QZ7 1491 aaPredicted RBP11.38□□□□□ -0.59
TPR-208ENST00000492973 PRDM9Q9NQV7 894 aa11.37□□□□□ -0.59
TPR-208ENST00000492973 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
TPR-208ENST00000492973 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.36□□□□□ -0.59
TPR-208ENST00000492973 MMP16P51512 607 aa11.35□□□□□ -0.59
TPR-208ENST00000492973 FBXO31Q5XUX0 539 aaPredicted RBP11.35□□□□□ -0.59
TPR-208ENST00000492973 PCMTD1Q96MG8 357 aaPredicted RBP11.35□□□□□ -0.59
TPR-208ENST00000492973 FHAD1B1AJZ9 1412 aa11.35□□□□□ -0.59
TPR-208ENST00000492973 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
TPR-208ENST00000492973 RNF223E7ERA6 249 aa11.34□□□□□ -0.59
TPR-208ENST00000492973 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
TPR-208ENST00000492973 GGCXP38435 758 aa11.34□□□□□ -0.59
TPR-208ENST00000492973 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
TPR-208ENST00000492973 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
TPR-208ENST00000492973 CFAP99D6REC4 459 aa11.33□□□□□ -0.6
TPR-208ENST00000492973 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
TPR-208ENST00000492973 PPP2R2DQ66LE6 453 aa11.33□□□□□ -0.6
TPR-208ENST00000492973 PBRM1Q86U86 1689 aa11.33□□□□□ -0.6
TPR-208ENST00000492973 ADAMTS12P58397 1594 aa11.32□□□□□ -0.6
TPR-208ENST00000492973 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
TPR-208ENST00000492973 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
TPR-208ENST00000492973 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
TPR-208ENST00000492973 JUNDP17535 347 aa11.31□□□□□ -0.6
TPR-208ENST00000492973 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
TPR-208ENST00000492973 DESI1Q6ICB0 168 aa11.31□□□□□ -0.6
TPR-208ENST00000492973 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
TPR-208ENST00000492973 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
TPR-208ENST00000492973 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
TPR-208ENST00000492973 FAM9AQ8IZU1 332 aaPredicted RBP11.29□□□□□ -0.6
TPR-208ENST00000492973 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
TPR-208ENST00000492973 EEA1Q15075 1411 aa11.28□□□□□ -0.6
TPR-208ENST00000492973 TMEM132AQ24JP5 1023 aa11.28□□□□□ -0.6
TPR-208ENST00000492973 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
TPR-208ENST00000492973 FCF1Q9Y324 198 aaKnown RBP11.27□□□□□ -0.61
TPR-208ENST00000492973 PRXQ9BXM0 1461 aa11.26□□□□□ -0.61
TPR-208ENST00000492973 NUP160Q12769 1436 aa11.26□□□□□ -0.61
TPR-208ENST00000492973 RFC5P40937 340 aa11.25□□□□□ -0.61
TPR-208ENST00000492973 PTPRNQ16849 979 aa11.25□□□□□ -0.61
TPR-208ENST00000492973 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
TPR-208ENST00000492973 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
TPR-208ENST00000492973 CHD1O14646 1710 aa11.24□□□□□ -0.61
TPR-208ENST00000492973 EMID1Q96A84 441 aaPredicted RBP11.24□□□□□ -0.61
TPR-208ENST00000492973 RAPGEF2Q9Y4G8 1499 aa11.24□□□□□ -0.61
TPR-208ENST00000492973 CUL7Q14999 1698 aa11.24□□□□□ -0.61
TPR-208ENST00000492973 RGS20O76081 388 aa11.23□□□□□ -0.61
TPR-208ENST00000492973 HELBQ8NG08 1087 aaPredicted RBP11.23□□□□□ -0.61
TPR-208ENST00000492973 PER1O15534 1290 aaPredicted RBP11.22□□□□□ -0.61
TPR-208ENST00000492973 NUDT12Q9BQG2 462 aa11.22□□□□□ -0.61
TPR-208ENST00000492973 CEP170Q5SW79 1584 aa11.21□□□□□ -0.61
TPR-208ENST00000492973 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
TPR-208ENST00000492973 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.61
TPR-208ENST00000492973 TSC1Q92574 1164 aa11.21□□□□□ -0.61
TPR-208ENST00000492973 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
TPR-208ENST00000492973 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
TPR-208ENST00000492973 AP1G2O75843 785 aa11.18□□□□□ -0.62
TPR-208ENST00000492973 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
TPR-208ENST00000492973 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
TPR-208ENST00000492973 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
TPR-208ENST00000492973 CCDC24Q8N4L8 307 aa11.17□□□□□ -0.62
TPR-208ENST00000492973 PRKD2Q9BZL6 878 aa11.17□□□□□ -0.62
TPR-208ENST00000492973 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
TPR-208ENST00000492973 KIAA0586Q9BVV6 1533 aa11.17□□□□□ -0.62
TPR-208ENST00000492973 SLC19A1P41440 591 aa11.16□□□□□ -0.62
TPR-208ENST00000492973 PTCRAQ6ISU1 281 aaPredicted RBP11.16□□□□□ -0.62
TPR-208ENST00000492973 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
TPR-208ENST00000492973 RPIAP49247 311 aa11.15□□□□□ -0.62
TPR-208ENST00000492973 KCNH2Q12809 1159 aa11.15□□□□□ -0.62
TPR-208ENST00000492973 LRRN4Q8WUT4 740 aa11.14□□□□□ -0.63
TPR-208ENST00000492973 MAP10Q9P2G4 905 aa11.14□□□□□ -0.63
TPR-208ENST00000492973 BANK1Q8NDB2 785 aa11.13□□□□□ -0.63
TPR-208ENST00000492973 KIF21BO75037 1637 aa11.13□□□□□ -0.63
TPR-208ENST00000492973 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
TPR-208ENST00000492973 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
TPR-208ENST00000492973 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
TPR-208ENST00000492973 TRIM32Q13049 653 aa11.11□□□□□ -0.63
TPR-208ENST00000492973 UNC93B1Q9H1C4 597 aa11.11□□□□□ -0.63
TPR-208ENST00000492973 GOLGA3Q08378 1498 aa11.11□□□□□ -0.63
TPR-208ENST00000492973 PRG4Q92954 1404 aaPredicted RBP11.1□□□□□ -0.63
TPR-208ENST00000492973 CTHP32929 405 aa11.1□□□□□ -0.63
TPR-208ENST00000492973 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
TPR-208ENST00000492973 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
TPR-208ENST00000492973 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
TPR-208ENST00000492973 IQGAP2Q13576 1575 aa11.08□□□□□ -0.64
TPR-208ENST00000492973 SOCS7O14512 581 aa11.08□□□□□ -0.64
TPR-208ENST00000492973 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
TPR-208ENST00000492973 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
TPR-208ENST00000492973 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
TPR-208ENST00000492973 RIMBP3CA6NJZ7 1639 aa11.07□□□□□ -0.64
TPR-208ENST00000492973 RIMBP3BA6NNM3 1639 aa11.07□□□□□ -0.64
TPR-208ENST00000492973 RIMBP3Q9UFD9 1639 aa11.07□□□□□ -0.64
TPR-208ENST00000492973 ARAP1Q96P48 1450 aa11.06□□□□□ -0.64
TPR-208ENST00000492973 UGGT2Q9NYU1 1516 aa11.06□□□□□ -0.64
TPR-208ENST00000492973 NR6A1Q15406 480 aa11.06□□□□□ -0.64
TPR-208ENST00000492973 MTMR14Q8NCE2 650 aa11.06□□□□□ -0.64
TPR-208ENST00000492973 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
TPR-208ENST00000492973 SNRKQ9NRH2 765 aa11.06□□□□□ -0.64
TPR-208ENST00000492973 DISP1Q96F81 1524 aa11.05□□□□□ -0.64
TPR-208ENST00000492973 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
TPR-208ENST00000492973 ZNF697Q5TEC3 545 aa11.05□□□□□ -0.64
TPR-208ENST00000492973 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms