RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 PLEKHG3A1L390 1219 aa20.32■□□□□ 0.84
ATG3-206ENST00000492886 VPS72Q15906 364 aa20.32■□□□□ 0.84
ATG3-206ENST00000492886 LMOD2Q6P5Q4 547 aa20.32■□□□□ 0.84
ATG3-206ENST00000492886 EP400Q96L91 3159 aa20.32■□□□□ 0.84
ATG3-206ENST00000492886 CENPJQ9HC77 1338 aaPredicted RBP20.31■□□□□ 0.84
ATG3-206ENST00000492886 FAM83GA6ND36 823 aa20.31■□□□□ 0.84
ATG3-206ENST00000492886 CCDC61Q9Y6R9 512 aa20.31■□□□□ 0.84
ATG3-206ENST00000492886 HAP1P54257 671 aaPredicted RBP20.3■□□□□ 0.84
ATG3-206ENST00000492886 ACEP12821 1306 aa20.29■□□□□ 0.84
ATG3-206ENST00000492886 ONECUT3O60422 494 aaPredicted RBP20.29■□□□□ 0.84
ATG3-206ENST00000492886 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
ATG3-206ENST00000492886 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.84
ATG3-206ENST00000492886 PPIP5K1Q6PFW1 1433 aa20.26■□□□□ 0.83
ATG3-206ENST00000492886 AKAP12Q02952 1782 aa20.26■□□□□ 0.83
ATG3-206ENST00000492886 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
ATG3-206ENST00000492886 LMO7Q8WWI1 1683 aa20.24■□□□□ 0.83
ATG3-206ENST00000492886 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
ATG3-206ENST00000492886 PLEKHG5O94827 1062 aa20.24■□□□□ 0.83
ATG3-206ENST00000492886 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
ATG3-206ENST00000492886 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
ATG3-206ENST00000492886 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
ATG3-206ENST00000492886 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
ATG3-206ENST00000492886 BTG4Q9NY30 223 aa20.22■□□□□ 0.83
ATG3-206ENST00000492886 USP19O94966 1318 aa20.22■□□□□ 0.83
ATG3-206ENST00000492886 SSH2Q76I76 1423 aa20.21■□□□□ 0.83
ATG3-206ENST00000492886 SEPT12Q8IYM1 358 aa20.21■□□□□ 0.83
ATG3-206ENST00000492886 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
ATG3-206ENST00000492886 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
ATG3-206ENST00000492886 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
ATG3-206ENST00000492886 CCDC125Q86Z20 511 aa20.2■□□□□ 0.82
ATG3-206ENST00000492886 USP6P35125 1406 aa20.19■□□□□ 0.82
ATG3-206ENST00000492886 SPATA31A5Q5VU36 1347 aa20.18■□□□□ 0.82
ATG3-206ENST00000492886 SPATA31A7Q8IWB4 1347 aa20.18■□□□□ 0.82
ATG3-206ENST00000492886 CPDO75976 1380 aa20.18■□□□□ 0.82
ATG3-206ENST00000492886 SBNO2Q9Y2G9 1366 aa20.18■□□□□ 0.82
ATG3-206ENST00000492886 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
ATG3-206ENST00000492886 SLIT3O75094 1523 aa20.17■□□□□ 0.82
ATG3-206ENST00000492886 PRDM11Q9NQV5 511 aa20.17■□□□□ 0.82
ATG3-206ENST00000492886 CAMTA1Q9Y6Y1 1673 aa20.16■□□□□ 0.82
ATG3-206ENST00000492886 MON2Q7Z3U7 1717 aa20.16■□□□□ 0.82
ATG3-206ENST00000492886 EVC2Q86UK5 1308 aa20.16■□□□□ 0.82
ATG3-206ENST00000492886 NUTM2GQ5VZR2 741 aa20.15■□□□□ 0.82
ATG3-206ENST00000492886 CABP1Q9NZU7 370 aa20.15■□□□□ 0.82
ATG3-206ENST00000492886 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
ATG3-206ENST00000492886 COL18A1P39060 1754 aa20.15■□□□□ 0.82
ATG3-206ENST00000492886 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
ATG3-206ENST00000492886 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
ATG3-206ENST00000492886 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
ATG3-206ENST00000492886 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
ATG3-206ENST00000492886 CPSF1Q10570 1443 aaKnown RBP20.12■□□□□ 0.81
ATG3-206ENST00000492886 SPATA31A1Q5TZJ5 1347 aa20.12■□□□□ 0.81
ATG3-206ENST00000492886 ZC3H6P61129 1189 aaKnown RBP20.12■□□□□ 0.81
ATG3-206ENST00000492886 TRIM26Q12899 539 aaPredicted RBP20.12■□□□□ 0.81
ATG3-206ENST00000492886 FAM98CQ17RN3 349 aaKnown RBP20.12■□□□□ 0.81
ATG3-206ENST00000492886 KRT27Q7Z3Y8 459 aa20.12■□□□□ 0.81
ATG3-206ENST00000492886 TNS1Q9HBL0 1735 aaKnown RBP20.11■□□□□ 0.81
ATG3-206ENST00000492886 NLRP13Q86W25 1043 aa20.11■□□□□ 0.81
ATG3-206ENST00000492886 GCP02774 474 aa20.1■□□□□ 0.81
ATG3-206ENST00000492886 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
ATG3-206ENST00000492886 PARP4Q9UKK3 1724 aaKnown RBP20.08■□□□□ 0.81
ATG3-206ENST00000492886 COL5A2P05997 1499 aaPredicted RBP20.08■□□□□ 0.81
ATG3-206ENST00000492886 WNK3Q9BYP7 1800 aa20.07■□□□□ 0.8
ATG3-206ENST00000492886 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
ATG3-206ENST00000492886 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
ATG3-206ENST00000492886 RGPD5Q99666 1765 aa20.07■□□□□ 0.8
ATG3-206ENST00000492886 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
ATG3-206ENST00000492886 TTC21BQ7Z4L5 1316 aa20.04■□□□□ 0.8
ATG3-206ENST00000492886 NFAT5O94916 1531 aa20.04■□□□□ 0.8
ATG3-206ENST00000492886 BARGINQ6ZT62 677 aa20.04■□□□□ 0.8
ATG3-206ENST00000492886 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
ATG3-206ENST00000492886 TTC21AQ8NDW8 1320 aa20.03■□□□□ 0.8
ATG3-206ENST00000492886 NLRP6P59044 892 aa20.03■□□□□ 0.8
ATG3-206ENST00000492886 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
ATG3-206ENST00000492886 DISP2A7MBM2 1401 aa20.02■□□□□ 0.8
ATG3-206ENST00000492886 LARP1Q6PKG0 1096 aaKnown RBP20.02■□□□□ 0.8
ATG3-206ENST00000492886 DEFB132Q7Z7B7 95 aa20.02■□□□□ 0.8
ATG3-206ENST00000492886 ABCC6O95255 1503 aa20.02■□□□□ 0.79
ATG3-206ENST00000492886 A0A0G2JS52 829 aa20.01■□□□□ 0.79
ATG3-206ENST00000492886 MYT1Q01538 1121 aa20.01■□□□□ 0.79
ATG3-206ENST00000492886 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
ATG3-206ENST00000492886 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
ATG3-206ENST00000492886 ZRANB1Q9UGI0 708 aa20■□□□□ 0.79
ATG3-206ENST00000492886 CRB1P82279 1406 aa20■□□□□ 0.79
ATG3-206ENST00000492886 PEAK1Q9H792 1746 aa19.99■□□□□ 0.79
ATG3-206ENST00000492886 LRRC37A3O60309 1634 aa19.99■□□□□ 0.79
ATG3-206ENST00000492886 USP31Q70CQ4 1352 aa19.99■□□□□ 0.79
ATG3-206ENST00000492886 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
ATG3-206ENST00000492886 LTN1O94822 1766 aa19.98■□□□□ 0.79
ATG3-206ENST00000492886 EVA1CP58658 441 aa19.98■□□□□ 0.79
ATG3-206ENST00000492886 SF3B2Q13435 895 aaKnown RBP19.98■□□□□ 0.79
ATG3-206ENST00000492886 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
ATG3-206ENST00000492886 TCP11L2Q8N4U5 519 aa19.98■□□□□ 0.79
ATG3-206ENST00000492886 TESK2Q96S53 571 aa19.98■□□□□ 0.79
ATG3-206ENST00000492886 SBF2Q86WG5 1849 aa19.97■□□□□ 0.79
ATG3-206ENST00000492886 ARHGEF25Q86VW2 580 aa19.97■□□□□ 0.79
ATG3-206ENST00000492886 RREB1Q92766 1687 aa19.96■□□□□ 0.79
ATG3-206ENST00000492886 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
ATG3-206ENST00000492886 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
ATG3-206ENST00000492886 AXIN2Q9Y2T1 843 aa19.95■□□□□ 0.78
ATG3-206ENST00000492886 EDC4Q6P2E9 1401 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms