RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 KCNC4Q03721 635 aa7.58□□□□□ -1.2
CLK1-213ENST00000492793 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
CLK1-213ENST00000492793 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
CLK1-213ENST00000492793 IRF5Q13568 498 aa7.57□□□□□ -1.2
CLK1-213ENST00000492793 EVA1BQ9NVM1 165 aa7.57□□□□□ -1.2
CLK1-213ENST00000492793 FKBPLQ9UIM3 349 aa7.57□□□□□ -1.2
CLK1-213ENST00000492793 F12P00748 615 aaPredicted RBP7.56□□□□□ -1.2
CLK1-213ENST00000492793 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
CLK1-213ENST00000492793 GLMNQ92990 594 aa7.55□□□□□ -1.2
CLK1-213ENST00000492793 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
CLK1-213ENST00000492793 PPEF1O14829 653 aaPredicted RBP7.54□□□□□ -1.2
CLK1-213ENST00000492793 HDGFL1Q5TGJ6 251 aa7.54□□□□□ -1.2
CLK1-213ENST00000492793 UNC93B1Q9H1C4 597 aa7.54□□□□□ -1.2
CLK1-213ENST00000492793 SERPINA10Q9UK55 444 aa7.54□□□□□ -1.2
CLK1-213ENST00000492793 GGCXP38435 758 aa7.53□□□□□ -1.2
CLK1-213ENST00000492793 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
CLK1-213ENST00000492793 AGERQ15109 404 aa7.53□□□□□ -1.2
CLK1-213ENST00000492793 NBPF14Q5TI25 921 aa7.53□□□□□ -1.2
CLK1-213ENST00000492793 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
CLK1-213ENST00000492793 ZBTB24O43167 697 aaPredicted RBP7.52□□□□□ -1.21
CLK1-213ENST00000492793 GPR37L1O60883 481 aa7.52□□□□□ -1.21
CLK1-213ENST00000492793 EIF4G2P78344 907 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLK1-213ENST00000492793 PTCRAQ6ISU1 281 aaPredicted RBP7.52□□□□□ -1.21
CLK1-213ENST00000492793 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
CLK1-213ENST00000492793 ARXQ96QS3 562 aa7.52□□□□□ -1.21
CLK1-213ENST00000492793 ZC3H4Q9UPT8 1303 aaKnown RBP7.52□□□□□ -1.21
CLK1-213ENST00000492793 FBXO45P0C2W1 286 aa7.51□□□□□ -1.21
CLK1-213ENST00000492793 PTK2Q05397 1052 aa7.51□□□□□ -1.21
CLK1-213ENST00000492793 NR1H3Q13133 447 aa7.51□□□□□ -1.21
CLK1-213ENST00000492793 LINC01559Q495D7 138 aa7.51□□□□□ -1.21
CLK1-213ENST00000492793 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
CLK1-213ENST00000492793 ZBTB33Q86T24 672 aa7.5□□□□□ -1.21
CLK1-213ENST00000492793 ARHGAP9Q9BRR9 750 aa7.5□□□□□ -1.21
CLK1-213ENST00000492793 CARD14Q9BXL6 1004 aa7.5□□□□□ -1.21
CLK1-213ENST00000492793 ITGBL1O95965 494 aaPredicted RBP7.49□□□□□ -1.21
CLK1-213ENST00000492793 SOX11P35716 441 aa7.49□□□□□ -1.21
CLK1-213ENST00000492793 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
CLK1-213ENST00000492793 BAP1Q92560 729 aa7.49□□□□□ -1.21
CLK1-213ENST00000492793 GPKOWQ92917 476 aaPredicted RBP eCLIP7.49□□□□□ -1.21
CLK1-213ENST00000492793 PCDHB9Q9Y5E1 797 aa7.49□□□□□ -1.21
CLK1-213ENST00000492793 RNF223E7ERA6 249 aa7.47□□□□□ -1.21
CLK1-213ENST00000492793 RFX1P22670 979 aa7.47□□□□□ -1.21
CLK1-213ENST00000492793 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
CLK1-213ENST00000492793 ADAMTS19Q8TE59 1207 aa7.47□□□□□ -1.21
CLK1-213ENST00000492793 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
CLK1-213ENST00000492793 ALG2Q9H553 416 aa7.46□□□□□ -1.22
CLK1-213ENST00000492793 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
CLK1-213ENST00000492793 DZIP3Q86Y13 1208 aaKnown RBP7.45□□□□□ -1.22
CLK1-213ENST00000492793 ANKLE1Q8NAG6 615 aa7.45□□□□□ -1.22
CLK1-213ENST00000492793 ZNF511Q8NB15 262 aa7.45□□□□□ -1.22
CLK1-213ENST00000492793 ADAM32Q8TC27 787 aa7.45□□□□□ -1.22
CLK1-213ENST00000492793 GPSM3Q9Y4H4 160 aa7.45□□□□□ -1.22
CLK1-213ENST00000492793 ZNF592Q92610 1267 aa7.44□□□□□ -1.22
CLK1-213ENST00000492793 FOXJ1Q92949 421 aa7.44□□□□□ -1.22
CLK1-213ENST00000492793 LMOD1P29536 600 aaPredicted RBP7.42□□□□□ -1.22
CLK1-213ENST00000492793 SH3BP2P78314 561 aa7.42□□□□□ -1.22
CLK1-213ENST00000492793 TRIM32Q13049 653 aa7.42□□□□□ -1.22
CLK1-213ENST00000492793 SLFNL1Q499Z3 407 aa7.42□□□□□ -1.22
CLK1-213ENST00000492793 PLA2G2CQ5R387 149 aa7.42□□□□□ -1.22
CLK1-213ENST00000492793 SH3BP5LQ7L8J4 393 aa7.42□□□□□ -1.22
CLK1-213ENST00000492793 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
CLK1-213ENST00000492793 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
CLK1-213ENST00000492793 PALM3A6NDB9 673 aaPredicted RBP7.41□□□□□ -1.22
CLK1-213ENST00000492793 SKIP12755 728 aa7.41□□□□□ -1.22
CLK1-213ENST00000492793 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
CLK1-213ENST00000492793 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
CLK1-213ENST00000492793 CD2BP2O95400 341 aaKnown RBP7.4□□□□□ -1.22
CLK1-213ENST00000492793 MCCD1P59942 119 aaPredicted RBP7.4□□□□□ -1.22
CLK1-213ENST00000492793 RNF135Q8IUD6 432 aa7.4□□□□□ -1.22
CLK1-213ENST00000492793 UCN2Q96RP3 112 aa7.4□□□□□ -1.22
CLK1-213ENST00000492793 ACIN1Q9UKV3 1341 aaKnown RBP7.4□□□□□ -1.22
CLK1-213ENST00000492793 PIK3CDO00329 1044 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 RAB15P59190 212 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 ERFEQ4G0M1 354 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 CDCA8Q53HL2 280 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 TBC1D9Q6ZT07 1266 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 SH3RF1Q7Z6J0 888 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 EHBP1Q8NDI1 1231 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 PLA2G2EQ9NZK7 142 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 CEP126Q9P2H0 1117 aa7.39□□□□□ -1.23
CLK1-213ENST00000492793 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.38□□□□□ -1.23
CLK1-213ENST00000492793 ATP9BO43861 1147 aa7.38□□□□□ -1.23
CLK1-213ENST00000492793 RPIAP49247 311 aa7.38□□□□□ -1.23
CLK1-213ENST00000492793 C4orf48Q5BLP8 95 aa7.38□□□□□ -1.23
CLK1-213ENST00000492793 WNT7BP56706 349 aa7.37□□□□□ -1.23
CLK1-213ENST00000492793 CFAP70Q5T0N1 1121 aa7.37□□□□□ -1.23
CLK1-213ENST00000492793 DEPDC4Q8N2C3 294 aa7.37□□□□□ -1.23
CLK1-213ENST00000492793 FAM174AQ8TBP5 190 aa7.37□□□□□ -1.23
CLK1-213ENST00000492793 VARSP26640 1264 aaKnown RBP7.36□□□□□ -1.23
CLK1-213ENST00000492793 SLC19A1P41440 591 aa7.36□□□□□ -1.23
CLK1-213ENST00000492793 SKOR1P84550 965 aa7.36□□□□□ -1.23
CLK1-213ENST00000492793 NBPF20Q3BBV1 942 aa7.36□□□□□ -1.23
CLK1-213ENST00000492793 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
CLK1-213ENST00000492793 MAFBQ9Y5Q3 323 aaPredicted RBP7.36□□□□□ -1.23
CLK1-213ENST00000492793 USP17L5A8MUK1 530 aa7.35□□□□□ -1.23
CLK1-213ENST00000492793 GIGYF1O75420 1035 aaPredicted RBP7.35□□□□□ -1.23
CLK1-213ENST00000492793 PPP1R15AO75807 674 aaPredicted RBP7.35□□□□□ -1.23
CLK1-213ENST00000492793 RC3H1Q5TC82 1133 aaKnown RBP7.35□□□□□ -1.23
CLK1-213ENST00000492793 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms