RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 NRAPQ86VF7 1730 aa24.9■■□□□ 1.58
SGMS1-204ENST00000492601 FAM83GA6ND36 823 aa24.9■■□□□ 1.58
SGMS1-204ENST00000492601 NEUROD1Q13562 356 aa24.89■■□□□ 1.58
SGMS1-204ENST00000492601 CCDC9Q9Y3X0 531 aaKnown RBP24.89■■□□□ 1.58
SGMS1-204ENST00000492601 COL14A1Q05707 1796 aaKnown RBP24.89■■□□□ 1.57
SGMS1-204ENST00000492601 TRPM1Q7Z4N2 1603 aa24.88■■□□□ 1.57
SGMS1-204ENST00000492601 VPS72Q15906 364 aa24.88■■□□□ 1.57
SGMS1-204ENST00000492601 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
SGMS1-204ENST00000492601 CCDC61Q9Y6R9 512 aa24.86■■□□□ 1.57
SGMS1-204ENST00000492601 PHRF1Q9P1Y6 1649 aaKnown RBP24.85■■□□□ 1.57
SGMS1-204ENST00000492601 ACEP12821 1306 aa24.85■■□□□ 1.57
SGMS1-204ENST00000492601 BTG4Q9NY30 223 aa24.84■■□□□ 1.57
SGMS1-204ENST00000492601 SRPK2P78362 688 aaKnown RBP24.83■■□□□ 1.57
SGMS1-204ENST00000492601 POLR3AO14802 1390 aaPredicted RBP24.82■■□□□ 1.56
SGMS1-204ENST00000492601 NBPF8Q3BBV2 869 aa24.82■■□□□ 1.56
SGMS1-204ENST00000492601 NUTM2GQ5VZR2 741 aa24.82■■□□□ 1.56
SGMS1-204ENST00000492601 SEPT12Q8IYM1 358 aa24.82■■□□□ 1.56
SGMS1-204ENST00000492601 PLEKHG3A1L390 1219 aa24.81■■□□□ 1.56
SGMS1-204ENST00000492601 CABP2Q9NPB3 220 aa24.81■■□□□ 1.56
SGMS1-204ENST00000492601 PPIP5K1Q6PFW1 1433 aa24.79■■□□□ 1.56
SGMS1-204ENST00000492601 PRDM11Q9NQV5 511 aa24.79■■□□□ 1.56
SGMS1-204ENST00000492601 A0A0G2JS52 829 aa24.76■■□□□ 1.55
SGMS1-204ENST00000492601 MYT1Q01538 1121 aa24.76■■□□□ 1.55
SGMS1-204ENST00000492601 ROCK2O75116 1388 aaKnown RBP24.76■■□□□ 1.55
SGMS1-204ENST00000492601 KIAA0232Q92628 1395 aa24.76■■□□□ 1.55
SGMS1-204ENST00000492601 ONECUT3O60422 494 aaPredicted RBP24.75■■□□□ 1.55
SGMS1-204ENST00000492601 FAM98CQ17RN3 349 aaKnown RBP24.75■■□□□ 1.55
SGMS1-204ENST00000492601 ZC3H6P61129 1189 aaKnown RBP24.74■■□□□ 1.55
SGMS1-204ENST00000492601 CHRNA2Q15822 529 aa24.74■■□□□ 1.55
SGMS1-204ENST00000492601 CCDC125Q86Z20 511 aa24.74■■□□□ 1.55
SGMS1-204ENST00000492601 ABTB2Q8N961 1025 aa24.74■■□□□ 1.55
SGMS1-204ENST00000492601 NRKQ7Z2Y5 1582 aa24.72■■□□□ 1.55
SGMS1-204ENST00000492601 KRT27Q7Z3Y8 459 aa24.72■■□□□ 1.55
SGMS1-204ENST00000492601 BLMP54132 1417 aaPredicted RBP24.7■■□□□ 1.55
SGMS1-204ENST00000492601 SPATA31A5Q5VU36 1347 aa24.7■■□□□ 1.54
SGMS1-204ENST00000492601 SPATA31A7Q8IWB4 1347 aa24.7■■□□□ 1.54
SGMS1-204ENST00000492601 CABP1Q9NZU7 370 aa24.7■■□□□ 1.54
SGMS1-204ENST00000492601 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
SGMS1-204ENST00000492601 STRN4Q9NRL3 753 aa24.68■■□□□ 1.54
SGMS1-204ENST00000492601 THSD7AQ9UPZ6 1657 aa24.66■■□□□ 1.54
SGMS1-204ENST00000492601 AKAP12Q02952 1782 aa24.66■■□□□ 1.54
SGMS1-204ENST00000492601 USP19O94966 1318 aa24.65■■□□□ 1.54
SGMS1-204ENST00000492601 USP6P35125 1406 aa24.65■■□□□ 1.54
SGMS1-204ENST00000492601 NLRP13Q86W25 1043 aa24.65■■□□□ 1.54
SGMS1-204ENST00000492601 SF3B2Q13435 895 aaKnown RBP24.64■■□□□ 1.54
SGMS1-204ENST00000492601 DEFB132Q7Z7B7 95 aa24.64■■□□□ 1.54
SGMS1-204ENST00000492601 LMO7Q8WWI1 1683 aa24.64■■□□□ 1.53
SGMS1-204ENST00000492601 PIK3C2AO00443 1686 aa24.63■■□□□ 1.53
SGMS1-204ENST00000492601 ZRANB1Q9UGI0 708 aa24.63■■□□□ 1.53
SGMS1-204ENST00000492601 CAMTA1Q9Y6Y1 1673 aa24.62■■□□□ 1.53
SGMS1-204ENST00000492601 SPATA31A1Q5TZJ5 1347 aa24.62■■□□□ 1.53
SGMS1-204ENST00000492601 BRD4O60885 1362 aaPredicted RBP24.62■■□□□ 1.53
SGMS1-204ENST00000492601 TONSLQ96HA7 1378 aa24.62■■□□□ 1.53
SGMS1-204ENST00000492601 SRCAPQ6ZRS2 3230 aa24.62■■□□□ 1.53
SGMS1-204ENST00000492601 GCP02774 474 aa24.61■■□□□ 1.53
SGMS1-204ENST00000492601 EVA1CP58658 441 aa24.61■■□□□ 1.53
SGMS1-204ENST00000492601 FAM182BQ5T319 152 aa24.61■■□□□ 1.53
SGMS1-204ENST00000492601 USP35Q9P2H5 1018 aa24.61■■□□□ 1.53
SGMS1-204ENST00000492601 CPDO75976 1380 aa24.6■■□□□ 1.53
SGMS1-204ENST00000492601 NLRP6P59044 892 aa24.6■■□□□ 1.53
SGMS1-204ENST00000492601 SSH2Q76I76 1423 aa24.6■■□□□ 1.53
SGMS1-204ENST00000492601 RGPD1P0DJD0 1748 aa24.59■■□□□ 1.53
SGMS1-204ENST00000492601 ZBTB7CA1YPR0 619 aa24.59■■□□□ 1.53
SGMS1-204ENST00000492601 CARD11Q9BXL7 1154 aa24.59■■□□□ 1.53
SGMS1-204ENST00000492601 TRIM26Q12899 539 aaPredicted RBP24.58■■□□□ 1.53
SGMS1-204ENST00000492601 SLIT3O75094 1523 aa24.56■■□□□ 1.52
SGMS1-204ENST00000492601 LARP1Q6PKG0 1096 aaKnown RBP24.56■■□□□ 1.52
SGMS1-204ENST00000492601 RGPD5Q99666 1765 aa24.55■■□□□ 1.52
SGMS1-204ENST00000492601 MON2Q7Z3U7 1717 aa24.55■■□□□ 1.52
SGMS1-204ENST00000492601 TNS1Q9HBL0 1735 aaKnown RBP24.53■■□□□ 1.52
SGMS1-204ENST00000492601 ZNF692Q9BU19 519 aaPredicted RBP24.53■■□□□ 1.52
SGMS1-204ENST00000492601 TTC21BQ7Z4L5 1316 aa24.53■■□□□ 1.52
SGMS1-204ENST00000492601 COL5A2P05997 1499 aaPredicted RBP24.52■■□□□ 1.52
SGMS1-204ENST00000492601 COL18A1P39060 1754 aa24.52■■□□□ 1.52
SGMS1-204ENST00000492601 SBNO2Q9Y2G9 1366 aa24.52■■□□□ 1.52
SGMS1-204ENST00000492601 BAG6P46379 1132 aa24.51■■□□□ 1.51
SGMS1-204ENST00000492601 BARGINQ6ZT62 677 aa24.5■■□□□ 1.51
SGMS1-204ENST00000492601 TCP11L2Q8N4U5 519 aa24.5■■□□□ 1.51
SGMS1-204ENST00000492601 KTN1Q86UP2 1357 aaKnown RBP24.5■■□□□ 1.51
SGMS1-204ENST00000492601 CPSF1Q10570 1443 aaKnown RBP24.5■■□□□ 1.51
SGMS1-204ENST00000492601 SOX12O15370 315 aa24.48■■□□□ 1.51
SGMS1-204ENST00000492601 PARP4Q9UKK3 1724 aaKnown RBP24.47■■□□□ 1.51
SGMS1-204ENST00000492601 AATKQ6ZMQ8 1374 aa24.47■■□□□ 1.51
SGMS1-204ENST00000492601 TTC21AQ8NDW8 1320 aa24.47■■□□□ 1.51
SGMS1-204ENST00000492601 EN1Q05925 392 aaPredicted RBP24.46■■□□□ 1.51
SGMS1-204ENST00000492601 PDE3BQ13370 1112 aa24.46■■□□□ 1.51
SGMS1-204ENST00000492601 CRB1P82279 1406 aa24.45■■□□□ 1.51
SGMS1-204ENST00000492601 FAM196AQ6ZSG2 479 aa24.45■■□□□ 1.5
SGMS1-204ENST00000492601 TMC1Q8TDI8 760 aa24.45■■□□□ 1.5
SGMS1-204ENST00000492601 WNK3Q9BYP7 1800 aa24.45■■□□□ 1.5
SGMS1-204ENST00000492601 TRIM37O94972 964 aa24.44■■□□□ 1.5
SGMS1-204ENST00000492601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.44■■□□□ 1.5
SGMS1-204ENST00000492601 THRAP3Q9Y2W1 955 aaKnown RBP24.44■■□□□ 1.5
SGMS1-204ENST00000492601 AXIN2Q9Y2T1 843 aa24.43■■□□□ 1.5
SGMS1-204ENST00000492601 CD163L1Q9NR16 1453 aa24.43■■□□□ 1.5
SGMS1-204ENST00000492601 NFAT5O94916 1531 aa24.42■■□□□ 1.5
SGMS1-204ENST00000492601 KCNH5Q8NCM2 988 aa24.42■■□□□ 1.5
SGMS1-204ENST00000492601 LTN1O94822 1766 aa24.42■■□□□ 1.5
SGMS1-204ENST00000492601 TOM1L2Q6ZVM7 507 aa24.41■■□□□ 1.5
SGMS1-204ENST00000492601 ARHGEF25Q86VW2 580 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms