RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 UPF1Q92900 1129 aaKnown RBP eCLIP10.18□□□□□ -0.78
PDLIM1-204ENST00000492511 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
PDLIM1-204ENST00000492511 BCL9LQ86UU0 1499 aa10.17□□□□□ -0.78
PDLIM1-204ENST00000492511 SSH2Q76I76 1423 aa10.16□□□□□ -0.78
PDLIM1-204ENST00000492511 ALS2Q96Q42 1657 aa10.16□□□□□ -0.78
PDLIM1-204ENST00000492511 FAM83GA6ND36 823 aa10.16□□□□□ -0.78
PDLIM1-204ENST00000492511 NUTM2GQ5VZR2 741 aa10.16□□□□□ -0.78
PDLIM1-204ENST00000492511 USP21Q9UK80 565 aa10.16□□□□□ -0.78
PDLIM1-204ENST00000492511 USP47Q96K76 1375 aa10.15□□□□□ -0.78
PDLIM1-204ENST00000492511 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
PDLIM1-204ENST00000492511 SLC12A5Q9H2X9 1139 aa10.15□□□□□ -0.78
PDLIM1-204ENST00000492511 ITSN1Q15811 1721 aa10.15□□□□□ -0.78
PDLIM1-204ENST00000492511 USP6P35125 1406 aa10.15□□□□□ -0.79
PDLIM1-204ENST00000492511 CPSF1Q10570 1443 aaKnown RBP10.15□□□□□ -0.79
PDLIM1-204ENST00000492511 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
PDLIM1-204ENST00000492511 SLIT2O94813 1529 aa10.14□□□□□ -0.79
PDLIM1-204ENST00000492511 ABTB2Q8N961 1025 aa10.14□□□□□ -0.79
PDLIM1-204ENST00000492511 ZNF692Q9BU19 519 aaPredicted RBP10.14□□□□□ -0.79
PDLIM1-204ENST00000492511 CD163L1Q9NR16 1453 aa10.14□□□□□ -0.79
PDLIM1-204ENST00000492511 TTC21BQ7Z4L5 1316 aa10.13□□□□□ -0.79
PDLIM1-204ENST00000492511 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
PDLIM1-204ENST00000492511 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
PDLIM1-204ENST00000492511 ATRNO75882 1429 aa10.13□□□□□ -0.79
PDLIM1-204ENST00000492511 BRD4O60885 1362 aaPredicted RBP10.13□□□□□ -0.79
PDLIM1-204ENST00000492511 USP19O94966 1318 aa10.12□□□□□ -0.79
PDLIM1-204ENST00000492511 RBM6P78332 1123 aaKnown RBP10.12□□□□□ -0.79
PDLIM1-204ENST00000492511 TRPC5Q9UL62 973 aaPredicted RBP10.12□□□□□ -0.79
PDLIM1-204ENST00000492511 ABCA3Q99758 1704 aa10.11□□□□□ -0.79
PDLIM1-204ENST00000492511 NLRP13Q86W25 1043 aa10.11□□□□□ -0.79
PDLIM1-204ENST00000492511 TMC1Q8TDI8 760 aa10.11□□□□□ -0.79
PDLIM1-204ENST00000492511 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 GCP02774 474 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 NLRP6P59044 892 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 ZC3H6P61129 1189 aaKnown RBP10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 TMF1P82094 1093 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 BTG4Q9NY30 223 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 ZRANB1Q9UGI0 708 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 KTN1Q86UP2 1357 aaKnown RBP10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 KIAA0232Q92628 1395 aa10.1□□□□□ -0.79
PDLIM1-204ENST00000492511 HSPA5P11021 654 aaKnown RBP10.09□□□□□ -0.79
PDLIM1-204ENST00000492511 CHRNA2Q15822 529 aa10.09□□□□□ -0.79
PDLIM1-204ENST00000492511 VPS72Q15906 364 aa10.09□□□□□ -0.79
PDLIM1-204ENST00000492511 MARF1Q9Y4F3 1742 aaKnown RBP10.09□□□□□ -0.79
PDLIM1-204ENST00000492511 A0A1W2PP64 1363 aa10.09□□□□□ -0.79
PDLIM1-204ENST00000492511 TTC21AQ8NDW8 1320 aa10.08□□□□□ -0.8
PDLIM1-204ENST00000492511 RGS12O14924 1447 aa10.08□□□□□ -0.8
PDLIM1-204ENST00000492511 NME9Q86XW9 330 aa10.08□□□□□ -0.8
PDLIM1-204ENST00000492511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.08□□□□□ -0.8
PDLIM1-204ENST00000492511 PRDM11Q9NQV5 511 aa10.08□□□□□ -0.8
PDLIM1-204ENST00000492511 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 CPDO75976 1380 aa10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 HDGFL2Q7Z4V5 671 aaPredicted RBP10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 TERF2IPQ9NYB0 399 aa10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 PHRF1Q9P1Y6 1649 aaKnown RBP10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 SLIT3O75094 1523 aa10.07□□□□□ -0.8
PDLIM1-204ENST00000492511 AKAP12Q02952 1782 aa10.06□□□□□ -0.8
PDLIM1-204ENST00000492511 NRKQ7Z2Y5 1582 aa10.06□□□□□ -0.8
PDLIM1-204ENST00000492511 USP31Q70CQ4 1352 aa10.06□□□□□ -0.8
PDLIM1-204ENST00000492511 NINLQ9Y2I6 1382 aa10.06□□□□□ -0.8
PDLIM1-204ENST00000492511 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
PDLIM1-204ENST00000492511 EDC4Q6P2E9 1401 aaKnown RBP10.06□□□□□ -0.8
PDLIM1-204ENST00000492511 GLI3P10071 1580 aa10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 C11orf95C9JLR9 678 aaPredicted RBP10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 ARHGEF25Q86VW2 580 aa10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 COL14A1Q05707 1796 aaKnown RBP10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 PLCH1Q4KWH8 1693 aa10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 SPATA31A5Q5VU36 1347 aa10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 SPATA31A7Q8IWB4 1347 aa10.05□□□□□ -0.8
PDLIM1-204ENST00000492511 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 ANKRD36BQ8N2N9 1353 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 CAMTA1Q9Y6Y1 1673 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 CDCA8Q53HL2 280 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 MON2Q7Z3U7 1717 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 NRAPQ86VF7 1730 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 EP400Q96L91 3159 aa10.04□□□□□ -0.8
PDLIM1-204ENST00000492511 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 SOX12O15370 315 aa10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 KCNH5Q8NCM2 988 aa10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 STRN4Q9NRL3 753 aa10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 SPATA31A1Q5TZJ5 1347 aa10.03□□□□□ -0.8
PDLIM1-204ENST00000492511 OVOS2A0A0J9YW53 1432 aa10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 OVOS2Q6IE36 1432 aa10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 ZBTB7CA1YPR0 619 aa10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 FYB1O15117 783 aa10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 LMO7Q8WWI1 1683 aa10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 NFAT5O94916 1531 aa10.02□□□□□ -0.81
PDLIM1-204ENST00000492511 FBLN1P23142 703 aa10.01□□□□□ -0.81
PDLIM1-204ENST00000492511 EVA1CP58658 441 aa10.01□□□□□ -0.81
PDLIM1-204ENST00000492511 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
PDLIM1-204ENST00000492511 COL5A2P05997 1499 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms