RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 CFAP74Q9C0B2 1584 aa7.96□□□□□ -1.13
CCDC6-202ENST00000491922 NUCB2P80303 420 aa7.96□□□□□ -1.14
CCDC6-202ENST00000491922 MAPK8IP2Q13387 824 aaPredicted RBP7.96□□□□□ -1.14
CCDC6-202ENST00000491922 CAVIN1Q6NZI2 390 aaKnown RBP7.96□□□□□ -1.14
CCDC6-202ENST00000491922 FTSJ3Q8IY81 847 aaKnown RBP7.96□□□□□ -1.14
CCDC6-202ENST00000491922 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
CCDC6-202ENST00000491922 FBXO41Q8TF61 875 aa7.96□□□□□ -1.14
CCDC6-202ENST00000491922 SHPRHQ149N8 1683 aa7.96□□□□□ -1.14
CCDC6-202ENST00000491922 KIAA2012Q0VF49 1180 aa7.96□□□□□ -1.14
CCDC6-202ENST00000491922 KIF2CQ99661 725 aa7.96□□□□□ -1.14
CCDC6-202ENST00000491922 CEP152O94986 1710 aa7.96□□□□□ -1.14
CCDC6-202ENST00000491922 MADDQ8WXG6 1647 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 ATP10AO60312 1499 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
CCDC6-202ENST00000491922 GTF2F1P35269 517 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC6-202ENST00000491922 DDX19BQ9UMR2 479 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 IQGAP3Q86VI3 1631 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 CT47B1P0C2W7 299 aaPredicted RBP7.95□□□□□ -1.14
CCDC6-202ENST00000491922 MCTP1Q6DN14 999 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 GAS2L2Q8NHY3 880 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 RUNDC1Q96C34 613 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 FOXD4L1Q9NU39 408 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 LMBRD1Q9NUN5 540 aa7.95□□□□□ -1.14
CCDC6-202ENST00000491922 SCAF11Q99590 1463 aaKnown RBP7.94□□□□□ -1.14
CCDC6-202ENST00000491922 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 PRIM1P49642 420 aaKnown RBP7.94□□□□□ -1.14
CCDC6-202ENST00000491922 CCDC27Q2M243 656 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 BMP2KLQ5H9B9 411 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 LRSAM1Q6UWE0 723 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 STAC3Q96MF2 364 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 PAXIP1Q6ZW49 1069 aaPredicted RBP7.94□□□□□ -1.14
CCDC6-202ENST00000491922 BCL2L13Q9BXK5 485 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 AK9Q5TCS8 1911 aa7.94□□□□□ -1.14
CCDC6-202ENST00000491922 CD2BP2O95400 341 aaKnown RBP7.93□□□□□ -1.14
CCDC6-202ENST00000491922 NUCB1Q02818 461 aa7.93□□□□□ -1.14
CCDC6-202ENST00000491922 TTC37Q6PGP7 1564 aa7.93□□□□□ -1.14
CCDC6-202ENST00000491922 CYP2E1P05181 493 aaPredicted RBP7.93□□□□□ -1.14
CCDC6-202ENST00000491922 CBX1P83916 185 aa7.93□□□□□ -1.14
CCDC6-202ENST00000491922 DNTTIP2Q5QJE6 756 aaKnown RBP7.93□□□□□ -1.14
CCDC6-202ENST00000491922 NAP1L2Q9ULW6 460 aaPredicted RBP7.93□□□□□ -1.14
CCDC6-202ENST00000491922 DUOX2Q9NRD8 1548 aa7.92□□□□□ -1.14
CCDC6-202ENST00000491922 PTMAP06454 111 aaKnown RBP7.92□□□□□ -1.14
CCDC6-202ENST00000491922 ZNF710Q8N1W2 664 aa7.92□□□□□ -1.14
CCDC6-202ENST00000491922 SPHKAPQ2M3C7 1700 aa7.92□□□□□ -1.14
CCDC6-202ENST00000491922 BRD2P25440 801 aaKnown RBP7.92□□□□□ -1.14
CCDC6-202ENST00000491922 FBLN2P98095 1184 aa7.92□□□□□ -1.14
CCDC6-202ENST00000491922 CWC22Q9HCG8 908 aaKnown RBP7.92□□□□□ -1.14
CCDC6-202ENST00000491922 KIF13AQ9H1H9 1805 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 RABEP1Q15276 862 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 CHD1LQ86WJ1 897 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 TCP11L2Q8N4U5 519 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 NEUROD2Q15784 382 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 PIBF1Q8WXW3 757 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 CFAP44Q96MT7 982 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 KIF3AQ9Y496 699 aa7.91□□□□□ -1.14
CCDC6-202ENST00000491922 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.91□□□□□ -1.148e-9■■■■■ 29.2
CCDC6-202ENST00000491922 MAST1Q9Y2H9 1570 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 MBD3O95983 291 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 ATP2B3Q16720 1220 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 ITPRIPQ8IWB1 547 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 GPT2Q8TD30 523 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 KIAA1210Q9ULL0 1709 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 CLTCL1P53675 1640 aa7.9□□□□□ -1.14
CCDC6-202ENST00000491922 IPO4Q8TEX9 1081 aaKnown RBP7.9□□□□□ -1.15
CCDC6-202ENST00000491922 TMEM51Q9NW97 253 aa7.9□□□□□ -1.15
CCDC6-202ENST00000491922 RRP7AQ9Y3A4 280 aaKnown RBP7.9□□□□□ -1.15
CCDC6-202ENST00000491922 ADGRL1O94910 1474 aa7.9□□□□□ -1.15
CCDC6-202ENST00000491922 YEATS2Q9ULM3 1422 aa7.9□□□□□ -1.15
CCDC6-202ENST00000491922 SYCE3A1L190 88 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
CCDC6-202ENST00000491922 TRIM27P14373 513 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 ATF7IPQ6VMQ6 1270 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 TBC1D9Q6ZT07 1266 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 RBM42Q9BTD8 480 aaKnown RBP7.89□□□□□ -1.15
CCDC6-202ENST00000491922 LNPKQ9C0E8 428 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 SMC4Q9NTJ3 1288 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 ZBTB40Q9NUA8 1239 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 RBM27Q9P2N5 1060 aaKnown RBP7.89□□□□□ -1.15
CCDC6-202ENST00000491922 LMTK3Q96Q04 1460 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 MAGI1Q96QZ7 1491 aaPredicted RBP7.89□□□□□ -1.15
CCDC6-202ENST00000491922 NOLC1Q14978 699 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC6-202ENST00000491922 PDCL2Q8N4E4 241 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 ADGRB2O60241 1585 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 HECW2Q9P2P5 1572 aa7.89□□□□□ -1.15
CCDC6-202ENST00000491922 PLB1Q6P1J6 1458 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 TSPY26PQ9H489 355 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 TMEM63CQ9P1W3 806 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 CDC45O75419 566 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 FKBP5Q13451 457 aaPredicted RBP7.88□□□□□ -1.15
CCDC6-202ENST00000491922 GCC1Q96CN9 775 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 FEZ1Q99689 392 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 BCL2L12Q9HB09 334 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 SPTLC3Q9NUV7 552 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 SAMD9LQ8IVG5 1584 aa7.88□□□□□ -1.15
CCDC6-202ENST00000491922 SOCS7O14512 581 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 HNRNPMP52272 730 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCDC6-202ENST00000491922 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 CNKSR2Q8WXI2 1034 aa7.87□□□□□ -1.15
CCDC6-202ENST00000491922 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
CCDC6-202ENST00000491922 ERVK-7P63135 1459 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms