RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 FAM83GA6ND36 823 aa25.41■■□□□ 1.66
ARPC1B-220ENST00000491294 CABP2Q9NPB3 220 aa25.4■■□□□ 1.66
ARPC1B-220ENST00000491294 ABCA3Q99758 1704 aa25.4■■□□□ 1.66
ARPC1B-220ENST00000491294 VPS72Q15906 364 aa25.38■■□□□ 1.65
ARPC1B-220ENST00000491294 TOPAZ1Q8N9V7 1692 aa25.38■■□□□ 1.65
ARPC1B-220ENST00000491294 RALGAPBQ86X10 1494 aa25.37■■□□□ 1.65
ARPC1B-220ENST00000491294 ATAD2Q6PL18 1390 aa25.36■■□□□ 1.65
ARPC1B-220ENST00000491294 QRICH2Q9H0J4 1663 aa25.36■■□□□ 1.65
ARPC1B-220ENST00000491294 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
ARPC1B-220ENST00000491294 PPIP5K1Q6PFW1 1433 aa25.35■■□□□ 1.65
ARPC1B-220ENST00000491294 EVC2Q86UK5 1308 aa25.35■■□□□ 1.65
ARPC1B-220ENST00000491294 NWD2Q9ULI1 1742 aa25.34■■□□□ 1.65
ARPC1B-220ENST00000491294 BTG4Q9NY30 223 aa25.33■■□□□ 1.65
ARPC1B-220ENST00000491294 PLCH1Q4KWH8 1693 aa25.32■■□□□ 1.64
ARPC1B-220ENST00000491294 GLI3P10071 1580 aa25.32■■□□□ 1.64
ARPC1B-220ENST00000491294 CCDC9Q9Y3X0 531 aaKnown RBP25.32■■□□□ 1.64
ARPC1B-220ENST00000491294 NUTM2GQ5VZR2 741 aa25.31■■□□□ 1.64
ARPC1B-220ENST00000491294 ABTB2Q8N961 1025 aa25.31■■□□□ 1.64
ARPC1B-220ENST00000491294 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
ARPC1B-220ENST00000491294 CABP1Q9NZU7 370 aa25.31■■□□□ 1.64
ARPC1B-220ENST00000491294 CARD11Q9BXL7 1154 aa25.29■■□□□ 1.64
ARPC1B-220ENST00000491294 BRD4O60885 1362 aaPredicted RBP25.29■■□□□ 1.64
ARPC1B-220ENST00000491294 CRYBG1Q9Y4K1 1723 aa25.29■■□□□ 1.64
ARPC1B-220ENST00000491294 COL14A1Q05707 1796 aaKnown RBP25.28■■□□□ 1.64
ARPC1B-220ENST00000491294 ONECUT3O60422 494 aaPredicted RBP25.28■■□□□ 1.64
ARPC1B-220ENST00000491294 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
ARPC1B-220ENST00000491294 KIAA0232Q92628 1395 aa25.26■■□□□ 1.63
ARPC1B-220ENST00000491294 NLRP13Q86W25 1043 aa25.25■■□□□ 1.63
ARPC1B-220ENST00000491294 ZC3H6P61129 1189 aaKnown RBP25.24■■□□□ 1.63
ARPC1B-220ENST00000491294 NRAPQ86VF7 1730 aa25.23■■□□□ 1.63
ARPC1B-220ENST00000491294 USP6P35125 1406 aa25.22■■□□□ 1.63
ARPC1B-220ENST00000491294 USP19O94966 1318 aa25.22■■□□□ 1.63
ARPC1B-220ENST00000491294 CHRNA2Q15822 529 aa25.22■■□□□ 1.63
ARPC1B-220ENST00000491294 CCDC125Q86Z20 511 aa25.22■■□□□ 1.63
ARPC1B-220ENST00000491294 SBNO2Q9Y2G9 1366 aa25.21■■□□□ 1.63
ARPC1B-220ENST00000491294 ZNF692Q9BU19 519 aaPredicted RBP25.21■■□□□ 1.63
ARPC1B-220ENST00000491294 PHRF1Q9P1Y6 1649 aaKnown RBP25.21■■□□□ 1.63
ARPC1B-220ENST00000491294 SPATA31A5Q5VU36 1347 aa25.2■■□□□ 1.62
ARPC1B-220ENST00000491294 SPATA31A7Q8IWB4 1347 aa25.2■■□□□ 1.62
ARPC1B-220ENST00000491294 FAM98CQ17RN3 349 aaKnown RBP25.19■■□□□ 1.62
ARPC1B-220ENST00000491294 GCP02774 474 aa25.18■■□□□ 1.62
ARPC1B-220ENST00000491294 CPDO75976 1380 aa25.18■■□□□ 1.62
ARPC1B-220ENST00000491294 A0A0G2JS52 829 aa25.17■■□□□ 1.62
ARPC1B-220ENST00000491294 NLRP6P59044 892 aa25.17■■□□□ 1.62
ARPC1B-220ENST00000491294 MYT1Q01538 1121 aa25.17■■□□□ 1.62
ARPC1B-220ENST00000491294 KRT27Q7Z3Y8 459 aa25.17■■□□□ 1.62
ARPC1B-220ENST00000491294 SSH2Q76I76 1423 aa25.17■■□□□ 1.62
ARPC1B-220ENST00000491294 BRWD3Q6RI45 1802 aa25.15■■□□□ 1.62
ARPC1B-220ENST00000491294 STRN4Q9NRL3 753 aa25.15■■□□□ 1.62
ARPC1B-220ENST00000491294 NRKQ7Z2Y5 1582 aa25.14■■□□□ 1.62
ARPC1B-220ENST00000491294 EVA1CP58658 441 aa25.14■■□□□ 1.62
ARPC1B-220ENST00000491294 TTC21BQ7Z4L5 1316 aa25.13■■□□□ 1.61
ARPC1B-220ENST00000491294 SPATA31A1Q5TZJ5 1347 aa25.12■■□□□ 1.61
ARPC1B-220ENST00000491294 CPSF1Q10570 1443 aaKnown RBP25.12■■□□□ 1.61
ARPC1B-220ENST00000491294 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
ARPC1B-220ENST00000491294 TTC21AQ8NDW8 1320 aa25.11■■□□□ 1.61
ARPC1B-220ENST00000491294 KTN1Q86UP2 1357 aaKnown RBP25.09■■□□□ 1.61
ARPC1B-220ENST00000491294 PUS7Q96PZ0 661 aaKnown RBP25.09■■□□□ 1.61
ARPC1B-220ENST00000491294 CAMTA1Q9Y6Y1 1673 aa25.09■■□□□ 1.61
ARPC1B-220ENST00000491294 EP400Q96L91 3159 aa25.08■■□□□ 1.61
ARPC1B-220ENST00000491294 SLIT3O75094 1523 aa25.07■■□□□ 1.6
ARPC1B-220ENST00000491294 SF3B2Q13435 895 aaKnown RBP25.07■■□□□ 1.6
ARPC1B-220ENST00000491294 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
ARPC1B-220ENST00000491294 AKAP12Q02952 1782 aa25.07■■□□□ 1.6
ARPC1B-220ENST00000491294 ST20-MTHFSA0A0A6YYL1 179 aa25.06■■□□□ 1.6
ARPC1B-220ENST00000491294 SLC24A1O60721 1099 aa25.06■■□□□ 1.6
ARPC1B-220ENST00000491294 LARP1Q6PKG0 1096 aaKnown RBP25.06■■□□□ 1.6
ARPC1B-220ENST00000491294 USP35Q9P2H5 1018 aa25.06■■□□□ 1.6
ARPC1B-220ENST00000491294 PIK3C2AO00443 1686 aa25.06■■□□□ 1.6
ARPC1B-220ENST00000491294 LMO7Q8WWI1 1683 aa25.05■■□□□ 1.6
ARPC1B-220ENST00000491294 ZBTB7CA1YPR0 619 aa25.05■■□□□ 1.6
ARPC1B-220ENST00000491294 BARGINQ6ZT62 677 aa25.05■■□□□ 1.6
ARPC1B-220ENST00000491294 TESK2Q96S53 571 aa25.05■■□□□ 1.6
ARPC1B-220ENST00000491294 KCNH5Q8NCM2 988 aa25.04■■□□□ 1.6
ARPC1B-220ENST00000491294 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
ARPC1B-220ENST00000491294 SLC12A5Q9H2X9 1139 aa25.04■■□□□ 1.6
ARPC1B-220ENST00000491294 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
ARPC1B-220ENST00000491294 AATKQ6ZMQ8 1374 aa25.04■■□□□ 1.6
ARPC1B-220ENST00000491294 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
ARPC1B-220ENST00000491294 TCP11L2Q8N4U5 519 aa25.03■■□□□ 1.6
ARPC1B-220ENST00000491294 TIMELESSQ9UNS1 1208 aa25.03■■□□□ 1.6
ARPC1B-220ENST00000491294 THSD7AQ9UPZ6 1657 aa25.03■■□□□ 1.6
ARPC1B-220ENST00000491294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.01■■□□□ 1.59
ARPC1B-220ENST00000491294 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
ARPC1B-220ENST00000491294 COL5A2P05997 1499 aaPredicted RBP25.01■■□□□ 1.59
ARPC1B-220ENST00000491294 CD163L1Q9NR16 1453 aa25.01■■□□□ 1.59
ARPC1B-220ENST00000491294 DEFB132Q7Z7B7 95 aa25■■□□□ 1.59
ARPC1B-220ENST00000491294 ARHGEF25Q86VW2 580 aa25■■□□□ 1.59
ARPC1B-220ENST00000491294 TERF2IPQ9NYB0 399 aa25■■□□□ 1.59
ARPC1B-220ENST00000491294 ZRANB1Q9UGI0 708 aa24.99■■□□□ 1.59
ARPC1B-220ENST00000491294 MON2Q7Z3U7 1717 aa24.98■■□□□ 1.59
ARPC1B-220ENST00000491294 FAM182BQ5T319 152 aa24.98■■□□□ 1.59
ARPC1B-220ENST00000491294 USP31Q70CQ4 1352 aa24.97■■□□□ 1.59
ARPC1B-220ENST00000491294 SOX12O15370 315 aa24.97■■□□□ 1.59
ARPC1B-220ENST00000491294 CRB1P82279 1406 aa24.96■■□□□ 1.59
ARPC1B-220ENST00000491294 PDE3BQ13370 1112 aa24.96■■□□□ 1.59
ARPC1B-220ENST00000491294 AXIN2Q9Y2T1 843 aa24.96■■□□□ 1.59
ARPC1B-220ENST00000491294 USP47Q96K76 1375 aa24.95■■□□□ 1.59
ARPC1B-220ENST00000491294 NINLQ9Y2I6 1382 aa24.95■■□□□ 1.59
ARPC1B-220ENST00000491294 BAG6P46379 1132 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms