RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SBNO1A3KN83 1393 aa22.24■■□□□ 1.15
CLIC4-203ENST00000489758 AKAP12Q02952 1782 aa22.23■■□□□ 1.15
CLIC4-203ENST00000489758 COL16A1Q07092 1604 aaPredicted RBP22.23■■□□□ 1.15
CLIC4-203ENST00000489758 BRD4O60885 1362 aaPredicted RBP22.23■■□□□ 1.15
CLIC4-203ENST00000489758 EDC4Q6P2E9 1401 aaKnown RBP22.23■■□□□ 1.15
CLIC4-203ENST00000489758 NRKQ7Z2Y5 1582 aa22.22■■□□□ 1.15
CLIC4-203ENST00000489758 TRPM3Q9HCF6 1732 aaPredicted RBP22.22■■□□□ 1.15
CLIC4-203ENST00000489758 MON2Q7Z3U7 1717 aa22.21■■□□□ 1.15
CLIC4-203ENST00000489758 SPATA31A3Q5VYP0 1347 aa22.2■■□□□ 1.14
CLIC4-203ENST00000489758 TTC21BQ7Z4L5 1316 aa22.2■■□□□ 1.14
CLIC4-203ENST00000489758 NSD3Q9BZ95 1437 aa22.2■■□□□ 1.14
CLIC4-203ENST00000489758 TNS3Q68CZ2 1445 aa22.19■■□□□ 1.14
CLIC4-203ENST00000489758 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
CLIC4-203ENST00000489758 TTC21AQ8NDW8 1320 aa22.17■■□□□ 1.14
CLIC4-203ENST00000489758 PER1O15534 1290 aaPredicted RBP22.17■■□□□ 1.14
CLIC4-203ENST00000489758 LRRC59Q96AG4 307 aaKnown RBP22.17■■□□□ 1.14
CLIC4-203ENST00000489758 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
CLIC4-203ENST00000489758 DDX10Q13206 875 aaKnown RBP22.16■■□□□ 1.14
CLIC4-203ENST00000489758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.16■■□□□ 1.14
CLIC4-203ENST00000489758 ALS2Q96Q42 1657 aa22.14■■□□□ 1.14
CLIC4-203ENST00000489758 NME9Q86XW9 330 aa22.14■■□□□ 1.13
CLIC4-203ENST00000489758 ARHGEF10O15013 1369 aa22.13■■□□□ 1.13
CLIC4-203ENST00000489758 PNPLA6Q8IY17 1366 aa22.13■■□□□ 1.13
CLIC4-203ENST00000489758 PIK3C2AO00443 1686 aa22.12■■□□□ 1.13
CLIC4-203ENST00000489758 FYB1O15117 783 aa22.12■■□□□ 1.13
CLIC4-203ENST00000489758 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
CLIC4-203ENST00000489758 USP31Q70CQ4 1352 aa22.11■■□□□ 1.13
CLIC4-203ENST00000489758 CGNL1Q0VF96 1302 aa22.1■■□□□ 1.13
CLIC4-203ENST00000489758 AMER1Q5JTC6 1135 aaPredicted RBP22.1■■□□□ 1.13
CLIC4-203ENST00000489758 ZRANB1Q9UGI0 708 aa22.1■■□□□ 1.13
CLIC4-203ENST00000489758 KNSTRNQ9Y448 316 aa22.1■■□□□ 1.13
CLIC4-203ENST00000489758 JCADQ9P266 1359 aa22.1■■□□□ 1.13
CLIC4-203ENST00000489758 NUTM2GQ5VZR2 741 aa22.09■■□□□ 1.13
CLIC4-203ENST00000489758 LMOD2Q6P5Q4 547 aa22.09■■□□□ 1.13
CLIC4-203ENST00000489758 OVOS2A0A0J9YW53 1432 aa22.08■■□□□ 1.13
CLIC4-203ENST00000489758 OVOS2Q6IE36 1432 aa22.08■■□□□ 1.13
CLIC4-203ENST00000489758 USP19O94966 1318 aa22.07■■□□□ 1.12
CLIC4-203ENST00000489758 COL22A1Q8NFW1 1626 aaPredicted RBP22.07■■□□□ 1.12
CLIC4-203ENST00000489758 NLRP6P59044 892 aa22.07■■□□□ 1.12
CLIC4-203ENST00000489758 GGNBP2Q9H3C7 697 aa22.07■■□□□ 1.12
CLIC4-203ENST00000489758 NPC1L1Q9UHC9 1359 aa22.06■■□□□ 1.12
CLIC4-203ENST00000489758 NSD2O96028 1365 aa22.05■■□□□ 1.12
CLIC4-203ENST00000489758 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
CLIC4-203ENST00000489758 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
CLIC4-203ENST00000489758 USP54Q70EL1 1684 aa22.04■■□□□ 1.12
CLIC4-203ENST00000489758 CABLES1Q8TDN4 633 aa22.04■■□□□ 1.12
CLIC4-203ENST00000489758 SLIT3O75094 1523 aa22.03■■□□□ 1.12
CLIC4-203ENST00000489758 MARF1Q9Y4F3 1742 aaKnown RBP22.03■■□□□ 1.12
CLIC4-203ENST00000489758 COG3Q96JB2 828 aa22.02■■□□□ 1.12
CLIC4-203ENST00000489758 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
CLIC4-203ENST00000489758 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
CLIC4-203ENST00000489758 KIF20BQ96Q89 1820 aa22■■□□□ 1.11
CLIC4-203ENST00000489758 SPATA31A6Q5VVP1 1343 aa22■■□□□ 1.11
CLIC4-203ENST00000489758 PLEKHG5O94827 1062 aa21.99■■□□□ 1.11
CLIC4-203ENST00000489758 GCP02774 474 aa21.98■■□□□ 1.11
CLIC4-203ENST00000489758 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
CLIC4-203ENST00000489758 NFAT5O94916 1531 aa21.97■■□□□ 1.11
CLIC4-203ENST00000489758 RGS17Q9UGC6 210 aaPredicted RBP21.97■■□□□ 1.11
CLIC4-203ENST00000489758 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
CLIC4-203ENST00000489758 LRP6O75581 1613 aa21.96■■□□□ 1.11
CLIC4-203ENST00000489758 MORC1Q86VD1 984 aa21.95■■□□□ 1.1
CLIC4-203ENST00000489758 KCNH5Q8NCM2 988 aa21.95■■□□□ 1.1
CLIC4-203ENST00000489758 NUTM2BA6NNL0 878 aaPredicted RBP21.94■■□□□ 1.1
CLIC4-203ENST00000489758 NUTM2EB1AL46 878 aaPredicted RBP21.94■■□□□ 1.1
CLIC4-203ENST00000489758 FBLN1P23142 703 aa21.94■■□□□ 1.1
CLIC4-203ENST00000489758 CNGB1Q14028 1251 aaPredicted RBP21.94■■□□□ 1.1
CLIC4-203ENST00000489758 NUTM2AQ8IVF1 878 aaPredicted RBP21.94■■□□□ 1.1
CLIC4-203ENST00000489758 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
CLIC4-203ENST00000489758 SOX12O15370 315 aa21.93■■□□□ 1.1
CLIC4-203ENST00000489758 CPDO75976 1380 aa21.93■■□□□ 1.1
CLIC4-203ENST00000489758 AATKQ6ZMQ8 1374 aa21.92■■□□□ 1.1
CLIC4-203ENST00000489758 PARD3Q8TEW0 1356 aa21.92■■□□□ 1.1
CLIC4-203ENST00000489758 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
CLIC4-203ENST00000489758 KIAA0232Q92628 1395 aa21.91■■□□□ 1.1
CLIC4-203ENST00000489758 ARHGEF25Q86VW2 580 aa21.91■■□□□ 1.1
CLIC4-203ENST00000489758 TNNT2P45379 298 aaPredicted RBP21.9■■□□□ 1.1
CLIC4-203ENST00000489758 ZC3H6P61129 1189 aaKnown RBP21.9■■□□□ 1.1
CLIC4-203ENST00000489758 ADAMTS2O95450 1211 aa21.89■■□□□ 1.09
CLIC4-203ENST00000489758 MAP3K19Q56UN5 1328 aa21.88■■□□□ 1.09
CLIC4-203ENST00000489758 FAM83GA6ND36 823 aa21.87■■□□□ 1.09
CLIC4-203ENST00000489758 RRS1Q15050 365 aaKnown RBP21.87■■□□□ 1.09
CLIC4-203ENST00000489758 POLKQ9UBT6 870 aa21.87■■□□□ 1.09
CLIC4-203ENST00000489758 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
CLIC4-203ENST00000489758 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
CLIC4-203ENST00000489758 SMG6Q86US8 1419 aaKnown RBP21.86■■□□□ 1.09
CLIC4-203ENST00000489758 RALBP1Q15311 655 aa21.85■■□□□ 1.09
CLIC4-203ENST00000489758 CHRNA2Q15822 529 aa21.85■■□□□ 1.09
CLIC4-203ENST00000489758 PRDM11Q9NQV5 511 aa21.85■■□□□ 1.09
CLIC4-203ENST00000489758 EMILIN1Q9Y6C2 1016 aa21.85■■□□□ 1.09
CLIC4-203ENST00000489758 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
CLIC4-203ENST00000489758 ABCC6O95255 1503 aa21.82■■□□□ 1.08
CLIC4-203ENST00000489758 RTL1A6NKG5 1358 aa21.82■■□□□ 1.08
CLIC4-203ENST00000489758 KIF24Q5T7B8 1368 aa21.82■■□□□ 1.08
CLIC4-203ENST00000489758 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
CLIC4-203ENST00000489758 PEAK1Q9H792 1746 aa21.81■■□□□ 1.08
CLIC4-203ENST00000489758 ZBTB7CA1YPR0 619 aa21.81■■□□□ 1.08
CLIC4-203ENST00000489758 MEX3CQ5U5Q3 659 aaKnown RBP21.81■■□□□ 1.08
CLIC4-203ENST00000489758 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
CLIC4-203ENST00000489758 IP6K1Q92551 441 aa21.81■■□□□ 1.08
CLIC4-203ENST00000489758 C8orf37Q96NL8 207 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms