RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 LTBP4Q8N2S1 1624 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 RBM33Q96EV2 1170 aaKnown RBP17.34■□□□□ 0.37
TOP3A-206ENST00000489131 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 AATKQ6ZMQ8 1374 aa17.33■□□□□ 0.36
TOP3A-206ENST00000489131 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
TOP3A-206ENST00000489131 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
TOP3A-206ENST00000489131 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
TOP3A-206ENST00000489131 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
TOP3A-206ENST00000489131 ATF3P18847 181 aa17.31■□□□□ 0.36
TOP3A-206ENST00000489131 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
TOP3A-206ENST00000489131 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
TOP3A-206ENST00000489131 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
TOP3A-206ENST00000489131 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
TOP3A-206ENST00000489131 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
TOP3A-206ENST00000489131 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
TOP3A-206ENST00000489131 NME9Q86XW9 330 aa17.28■□□□□ 0.36
TOP3A-206ENST00000489131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
TOP3A-206ENST00000489131 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
TOP3A-206ENST00000489131 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
TOP3A-206ENST00000489131 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-206ENST00000489131 ESCO1Q5FWF5 840 aa17.27■□□□□ 0.36
TOP3A-206ENST00000489131 COG3Q96JB2 828 aa17.26■□□□□ 0.35
TOP3A-206ENST00000489131 BLMP54132 1417 aaPredicted RBP17.25■□□□□ 0.35
TOP3A-206ENST00000489131 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
TOP3A-206ENST00000489131 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
TOP3A-206ENST00000489131 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
TOP3A-206ENST00000489131 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
TOP3A-206ENST00000489131 MTHFSP49914 203 aa17.23■□□□□ 0.35
TOP3A-206ENST00000489131 SBNO1A3KN83 1393 aa17.22■□□□□ 0.35
TOP3A-206ENST00000489131 PXDNQ92626 1479 aa17.22■□□□□ 0.35
TOP3A-206ENST00000489131 MAP2P11137 1827 aaKnown RBP17.21■□□□□ 0.35
TOP3A-206ENST00000489131 KIF24Q5T7B8 1368 aa17.21■□□□□ 0.35
TOP3A-206ENST00000489131 FAM9BQ8IZU0 186 aa17.21■□□□□ 0.35
TOP3A-206ENST00000489131 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
TOP3A-206ENST00000489131 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
TOP3A-206ENST00000489131 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
TOP3A-206ENST00000489131 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
TOP3A-206ENST00000489131 SLIT3O75094 1523 aa17.2■□□□□ 0.34
TOP3A-206ENST00000489131 NPHP3Q7Z494 1330 aa17.2■□□□□ 0.34
TOP3A-206ENST00000489131 NHSL1Q5SYE7 1610 aa17.19■□□□□ 0.34
TOP3A-206ENST00000489131 PSME1Q06323 249 aa17.19■□□□□ 0.34
TOP3A-206ENST00000489131 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
TOP3A-206ENST00000489131 SLAIN2Q9P270 581 aa17.19■□□□□ 0.34
TOP3A-206ENST00000489131 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
TOP3A-206ENST00000489131 NFAT5O94916 1531 aa17.18■□□□□ 0.34
TOP3A-206ENST00000489131 FOXO3O43524 673 aa17.18■□□□□ 0.34
TOP3A-206ENST00000489131 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
TOP3A-206ENST00000489131 BRINP3Q76B58 766 aa17.18■□□□□ 0.34
TOP3A-206ENST00000489131 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
TOP3A-206ENST00000489131 USP19O94966 1318 aa17.17■□□□□ 0.34
TOP3A-206ENST00000489131 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
TOP3A-206ENST00000489131 KRT28Q7Z3Y7 464 aa17.16■□□□□ 0.34
TOP3A-206ENST00000489131 ZBED9Q6R2W3 1325 aa17.16■□□□□ 0.34
TOP3A-206ENST00000489131 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
TOP3A-206ENST00000489131 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
TOP3A-206ENST00000489131 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
TOP3A-206ENST00000489131 ADAMTS8Q9UP79 889 aa17.15■□□□□ 0.34
TOP3A-206ENST00000489131 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
TOP3A-206ENST00000489131 TNS3Q68CZ2 1445 aa17.14■□□□□ 0.33
TOP3A-206ENST00000489131 CRYBG1Q9Y4K1 1723 aa17.14■□□□□ 0.33
TOP3A-206ENST00000489131 NLRP6P59044 892 aa17.14■□□□□ 0.33
TOP3A-206ENST00000489131 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
TOP3A-206ENST00000489131 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.33
TOP3A-206ENST00000489131 AHDC1Q5TGY3 1603 aaPredicted RBP17.13■□□□□ 0.33
TOP3A-206ENST00000489131 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
TOP3A-206ENST00000489131 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
TOP3A-206ENST00000489131 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
TOP3A-206ENST00000489131 FLT4P35916 1363 aa17.12■□□□□ 0.33
TOP3A-206ENST00000489131 RGPD1P0DJD0 1748 aa17.11■□□□□ 0.33
TOP3A-206ENST00000489131 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
TOP3A-206ENST00000489131 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
TOP3A-206ENST00000489131 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
TOP3A-206ENST00000489131 ABCC6O95255 1503 aa17.11■□□□□ 0.33
TOP3A-206ENST00000489131 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
TOP3A-206ENST00000489131 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
TOP3A-206ENST00000489131 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
TOP3A-206ENST00000489131 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
TOP3A-206ENST00000489131 LTN1O94822 1766 aa17.1■□□□□ 0.33
TOP3A-206ENST00000489131 IL13P35225 146 aa17.09■□□□□ 0.33
TOP3A-206ENST00000489131 ROBO1Q9Y6N7 1651 aa17.09■□□□□ 0.33
TOP3A-206ENST00000489131 FBLN1P23142 703 aa17.08■□□□□ 0.32
TOP3A-206ENST00000489131 RRS1Q15050 365 aaKnown RBP17.08■□□□□ 0.32
TOP3A-206ENST00000489131 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
TOP3A-206ENST00000489131 FCHSD2O94868 740 aa17.04■□□□□ 0.32
TOP3A-206ENST00000489131 GCP02774 474 aa17.04■□□□□ 0.32
TOP3A-206ENST00000489131 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
TOP3A-206ENST00000489131 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
TOP3A-206ENST00000489131 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
TOP3A-206ENST00000489131 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
TOP3A-206ENST00000489131 HOXC9P31274 260 aa17.03■□□□□ 0.32
TOP3A-206ENST00000489131 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
TOP3A-206ENST00000489131 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
TOP3A-206ENST00000489131 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
TOP3A-206ENST00000489131 COL22A1Q8NFW1 1626 aaPredicted RBP17.03■□□□□ 0.32
TOP3A-206ENST00000489131 CPDO75976 1380 aa17.02■□□□□ 0.32
TOP3A-206ENST00000489131 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms