RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 FAM98CQ17RN3 349 aaKnown RBP27.96■■■□□ 2.07
GGPS1-206ENST00000488594 NGDNQ8NEJ9 315 aaKnown RBP27.96■■■□□ 2.07
GGPS1-206ENST00000488594 NRAPQ86VF7 1730 aa27.95■■■□□ 2.06
GGPS1-206ENST00000488594 COL14A1Q05707 1796 aaKnown RBP27.95■■■□□ 2.06
GGPS1-206ENST00000488594 BAG6P46379 1132 aa27.94■■■□□ 2.06
GGPS1-206ENST00000488594 PAK3O75914 559 aaPredicted RBP27.9■■■□□ 2.06
GGPS1-206ENST00000488594 SPATA31A5Q5VU36 1347 aa27.9■■■□□ 2.06
GGPS1-206ENST00000488594 SPATA31A7Q8IWB4 1347 aa27.9■■■□□ 2.06
GGPS1-206ENST00000488594 PRDM11Q9NQV5 511 aa27.88■■■□□ 2.05
GGPS1-206ENST00000488594 HRCP23327 699 aa27.87■■■□□ 2.05
GGPS1-206ENST00000488594 NUDT16Q96DE0 195 aaKnown RBP27.86■■■□□ 2.05
GGPS1-206ENST00000488594 ATP7BP35670 1465 aa27.85■■■□□ 2.05
GGPS1-206ENST00000488594 CRYBG1Q9Y4K1 1723 aa27.83■■■□□ 2.05
GGPS1-206ENST00000488594 LRP5O75197 1615 aa27.83■■■□□ 2.05
GGPS1-206ENST00000488594 ITSN1Q15811 1721 aa27.83■■■□□ 2.05
GGPS1-206ENST00000488594 ARHGEF28Q8N1W1 1705 aaKnown RBP27.81■■■□□ 2.04
GGPS1-206ENST00000488594 KIAA0232Q92628 1395 aa27.81■■■□□ 2.04
GGPS1-206ENST00000488594 THSD7AQ9UPZ6 1657 aa27.8■■■□□ 2.04
GGPS1-206ENST00000488594 SPATA31A1Q5TZJ5 1347 aa27.79■■■□□ 2.04
GGPS1-206ENST00000488594 DISP2A7MBM2 1401 aa27.79■■■□□ 2.04
GGPS1-206ENST00000488594 RGPD1P0DJD0 1748 aa27.79■■■□□ 2.04
GGPS1-206ENST00000488594 EN1Q05925 392 aaPredicted RBP27.78■■■□□ 2.04
GGPS1-206ENST00000488594 CDK19Q9BWU1 502 aa27.78■■■□□ 2.04
GGPS1-206ENST00000488594 POLR3AO14802 1390 aaPredicted RBP27.77■■■□□ 2.04
GGPS1-206ENST00000488594 PSDA5PKW4 1024 aaPredicted RBP27.77■■■□□ 2.04
GGPS1-206ENST00000488594 FAM182BQ5T319 152 aa27.77■■■□□ 2.04
GGPS1-206ENST00000488594 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
GGPS1-206ENST00000488594 CHRNA2Q15822 529 aa27.74■■■□□ 2.03
GGPS1-206ENST00000488594 ZC3H6P61129 1189 aaKnown RBP27.73■■■□□ 2.03
GGPS1-206ENST00000488594 NBPF8Q3BBV2 869 aa27.73■■■□□ 2.03
GGPS1-206ENST00000488594 FAM196AQ6ZSG2 479 aa27.73■■■□□ 2.03
GGPS1-206ENST00000488594 STRN4Q9NRL3 753 aa27.73■■■□□ 2.03
GGPS1-206ENST00000488594 ACEP12821 1306 aa27.73■■■□□ 2.03
GGPS1-206ENST00000488594 PHRF1Q9P1Y6 1649 aaKnown RBP27.73■■■□□ 2.03
GGPS1-206ENST00000488594 PLEKHG3A1L390 1219 aa27.73■■■□□ 2.03
GGPS1-206ENST00000488594 NUTM2GQ5VZR2 741 aa27.71■■■□□ 2.03
GGPS1-206ENST00000488594 EVA1CP58658 441 aa27.7■■■□□ 2.02
GGPS1-206ENST00000488594 BARGINQ6ZT62 677 aa27.7■■■□□ 2.02
GGPS1-206ENST00000488594 TOPAZ1Q8N9V7 1692 aa27.69■■■□□ 2.02
GGPS1-206ENST00000488594 KIAA1210Q9ULL0 1709 aa27.68■■■□□ 2.02
GGPS1-206ENST00000488594 ABTB2Q8N961 1025 aa27.68■■■□□ 2.02
GGPS1-206ENST00000488594 SSH2Q76I76 1423 aa27.68■■■□□ 2.02
GGPS1-206ENST00000488594 R3HDM1Q15032 1099 aaKnown RBP27.67■■■□□ 2.02
GGPS1-206ENST00000488594 CPDO75976 1380 aa27.67■■■□□ 2.02
GGPS1-206ENST00000488594 PARD3Q8TEW0 1356 aa27.67■■■□□ 2.02
GGPS1-206ENST00000488594 TNS1Q9HBL0 1735 aaKnown RBP27.67■■■□□ 2.02
GGPS1-206ENST00000488594 TRIM37O94972 964 aa27.66■■■□□ 2.02
GGPS1-206ENST00000488594 EZH2Q15910 746 aaKnown RBP27.66■■■□□ 2.02
GGPS1-206ENST00000488594 USP35Q9P2H5 1018 aa27.66■■■□□ 2.02
GGPS1-206ENST00000488594 USP19O94966 1318 aa27.65■■■□□ 2.02
GGPS1-206ENST00000488594 CAMKK2Q96RR4 588 aa27.65■■■□□ 2.02
GGPS1-206ENST00000488594 PDE3BQ13370 1112 aa27.64■■■□□ 2.02
GGPS1-206ENST00000488594 NRKQ7Z2Y5 1582 aa27.64■■■□□ 2.02
GGPS1-206ENST00000488594 NLRP13Q86W25 1043 aa27.63■■■□□ 2.01
GGPS1-206ENST00000488594 TCP11L2Q8N4U5 519 aa27.62■■■□□ 2.01
GGPS1-206ENST00000488594 BRD4O60885 1362 aaPredicted RBP27.62■■■□□ 2.01
GGPS1-206ENST00000488594 APBA3O96018 575 aa27.61■■■□□ 2.01
GGPS1-206ENST00000488594 SRPK2P78362 688 aaKnown RBP27.61■■■□□ 2.01
GGPS1-206ENST00000488594 NBPF1Q3BBV0 1214 aa27.61■■■□□ 2.01
GGPS1-206ENST00000488594 CAMTA1Q9Y6Y1 1673 aa27.61■■■□□ 2.01
GGPS1-206ENST00000488594 LARP1Q6PKG0 1096 aaKnown RBP27.6■■■□□ 2.01
GGPS1-206ENST00000488594 THRAP3Q9Y2W1 955 aaKnown RBP27.6■■■□□ 2.01
GGPS1-206ENST00000488594 PPIP5K1Q6PFW1 1433 aa27.6■■■□□ 2.01
GGPS1-206ENST00000488594 CENPJQ9HC77 1338 aaPredicted RBP27.59■■■□□ 2.01
GGPS1-206ENST00000488594 GCP02774 474 aa27.59■■■□□ 2.01
GGPS1-206ENST00000488594 LMO7Q8WWI1 1683 aa27.58■■■□□ 2.01
GGPS1-206ENST00000488594 C11orf95C9JLR9 678 aaPredicted RBP27.56■■■□□ 2
GGPS1-206ENST00000488594 CABP2Q9NPB3 220 aa27.54■■■□□ 2
GGPS1-206ENST00000488594 COL5A2P05997 1499 aaPredicted RBP27.53■■■□□ 2
GGPS1-206ENST00000488594 NBPF14Q5TI25 921 aa27.51■■□□□ 1.99
GGPS1-206ENST00000488594 USP6P35125 1406 aa27.5■■□□□ 1.99
GGPS1-206ENST00000488594 CRB1P82279 1406 aa27.5■■□□□ 1.99
GGPS1-206ENST00000488594 NLRP6P59044 892 aa27.48■■□□□ 1.99
GGPS1-206ENST00000488594 CABP1Q9NZU7 370 aa27.48■■□□□ 1.99
GGPS1-206ENST00000488594 AATKQ6ZMQ8 1374 aa27.48■■□□□ 1.99
GGPS1-206ENST00000488594 RREB1Q92766 1687 aa27.46■■□□□ 1.99
GGPS1-206ENST00000488594 PARP4Q9UKK3 1724 aaKnown RBP27.46■■□□□ 1.99
GGPS1-206ENST00000488594 QRICH2Q9H0J4 1663 aa27.45■■□□□ 1.98
GGPS1-206ENST00000488594 SLIT3O75094 1523 aa27.44■■□□□ 1.98
GGPS1-206ENST00000488594 OVOS2A0A0G2JMS6 1433 aa27.44■■□□□ 1.98
GGPS1-206ENST00000488594 OVOS2A0A0J9YW53 1432 aa27.44■■□□□ 1.98
GGPS1-206ENST00000488594 OVOS2Q6IE36 1432 aa27.44■■□□□ 1.98
GGPS1-206ENST00000488594 ZBTB7CA1YPR0 619 aa27.43■■□□□ 1.98
GGPS1-206ENST00000488594 EVC2Q86UK5 1308 aa27.43■■□□□ 1.98
GGPS1-206ENST00000488594 NUP188Q5SRE5 1749 aa27.42■■□□□ 1.98
GGPS1-206ENST00000488594 DDB1Q16531 1140 aa27.4■■□□□ 1.98
GGPS1-206ENST00000488594 TOM1L2Q6ZVM7 507 aa27.4■■□□□ 1.98
GGPS1-206ENST00000488594 L3MBTL2Q969R5 705 aa27.39■■□□□ 1.98
GGPS1-206ENST00000488594 ZNF692Q9BU19 519 aaPredicted RBP27.38■■□□□ 1.97
GGPS1-206ENST00000488594 CDCA7Q9BWT1 371 aaPredicted RBP27.38■■□□□ 1.97
GGPS1-206ENST00000488594 PLSCR1O15162 318 aa27.37■■□□□ 1.97
GGPS1-206ENST00000488594 KCNH5Q8NCM2 988 aa27.37■■□□□ 1.97
GGPS1-206ENST00000488594 WDR17Q8IZU2 1322 aa27.37■■□□□ 1.97
GGPS1-206ENST00000488594 SPON1Q9HCB6 807 aa27.36■■□□□ 1.97
GGPS1-206ENST00000488594 PEAK1Q9H792 1746 aa27.36■■□□□ 1.97
GGPS1-206ENST00000488594 LRRC37A3O60309 1634 aa27.35■■□□□ 1.97
GGPS1-206ENST00000488594 CPSF1Q10570 1443 aaKnown RBP27.35■■□□□ 1.97
GGPS1-206ENST00000488594 PIK3C2AO00443 1686 aa27.34■■□□□ 1.97
GGPS1-206ENST00000488594 BCL11BQ9C0K0 894 aaPredicted RBP27.34■■□□□ 1.97
GGPS1-206ENST00000488594 AXIN2Q9Y2T1 843 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms