RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 CABP2Q9NPB3 220 aa29.15■■■□□ 2.26
PKD1-221ENST00000488185 CLSPNQ9HAW4 1339 aa29.15■■■□□ 2.26
PKD1-221ENST00000488185 PPIP5K1Q6PFW1 1433 aa29.14■■■□□ 2.26
PKD1-221ENST00000488185 HAP1P54257 671 aaPredicted RBP29.14■■■□□ 2.26
PKD1-221ENST00000488185 ABCA3Q99758 1704 aa29.14■■■□□ 2.25
PKD1-221ENST00000488185 CARD11Q9BXL7 1154 aa29.13■■■□□ 2.25
PKD1-221ENST00000488185 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.13■■■□□ 2.25
PKD1-221ENST00000488185 PCGF6Q9BYE7 350 aa29.12■■■□□ 2.25
PKD1-221ENST00000488185 RGS12O14924 1447 aa29.11■■■□□ 2.25
PKD1-221ENST00000488185 PAK3O75914 559 aaPredicted RBP29.11■■■□□ 2.25
PKD1-221ENST00000488185 GJD4Q96KN9 370 aaPredicted RBP29.1■■■□□ 2.25
PKD1-221ENST00000488185 TIMELESSQ9UNS1 1208 aa29.1■■■□□ 2.25
PKD1-221ENST00000488185 FAM83GA6ND36 823 aa29.09■■■□□ 2.25
PKD1-221ENST00000488185 CABP1Q9NZU7 370 aa29.08■■■□□ 2.25
PKD1-221ENST00000488185 CRYBG1Q9Y4K1 1723 aa29.07■■■□□ 2.24
PKD1-221ENST00000488185 NWD2Q9ULI1 1742 aa29.06■■■□□ 2.24
PKD1-221ENST00000488185 VPS72Q15906 364 aa29.05■■■□□ 2.24
PKD1-221ENST00000488185 ATAD2Q6PL18 1390 aa29.04■■■□□ 2.24
PKD1-221ENST00000488185 USP6P35125 1406 aa29.03■■■□□ 2.24
PKD1-221ENST00000488185 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
PKD1-221ENST00000488185 UPF1Q92900 1129 aaKnown RBP eCLIP29.02■■■□□ 2.24
PKD1-221ENST00000488185 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
PKD1-221ENST00000488185 ZNF692Q9BU19 519 aaPredicted RBP29.02■■■□□ 2.24
PKD1-221ENST00000488185 ABTB2Q8N961 1025 aa29.01■■■□□ 2.23
PKD1-221ENST00000488185 USP19O94966 1318 aa29■■■□□ 2.23
PKD1-221ENST00000488185 PLCH1Q4KWH8 1693 aa29■■■□□ 2.23
PKD1-221ENST00000488185 COL14A1Q05707 1796 aaKnown RBP28.99■■■□□ 2.23
PKD1-221ENST00000488185 ONECUT3O60422 494 aaPredicted RBP28.99■■■□□ 2.23
PKD1-221ENST00000488185 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
PKD1-221ENST00000488185 PLEKHG5O94827 1062 aa28.99■■■□□ 2.23
PKD1-221ENST00000488185 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
PKD1-221ENST00000488185 GLI3P10071 1580 aa28.97■■■□□ 2.23
PKD1-221ENST00000488185 CPSF1Q10570 1443 aaKnown RBP28.97■■■□□ 2.23
PKD1-221ENST00000488185 BTG4Q9NY30 223 aa28.96■■■□□ 2.23
PKD1-221ENST00000488185 CPDO75976 1380 aa28.96■■■□□ 2.23
PKD1-221ENST00000488185 PRDM11Q9NQV5 511 aa28.95■■■□□ 2.22
PKD1-221ENST00000488185 PHRF1Q9P1Y6 1649 aaKnown RBP28.94■■■□□ 2.22
PKD1-221ENST00000488185 KIAA0232Q92628 1395 aa28.94■■■□□ 2.22
PKD1-221ENST00000488185 TESK2Q96S53 571 aa28.94■■■□□ 2.22
PKD1-221ENST00000488185 NRAPQ86VF7 1730 aa28.92■■■□□ 2.22
PKD1-221ENST00000488185 NUTM2GQ5VZR2 741 aa28.92■■■□□ 2.22
PKD1-221ENST00000488185 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
PKD1-221ENST00000488185 GCP02774 474 aa28.9■■■□□ 2.22
PKD1-221ENST00000488185 TTC21AQ8NDW8 1320 aa28.9■■■□□ 2.22
PKD1-221ENST00000488185 NRKQ7Z2Y5 1582 aa28.89■■■□□ 2.22
PKD1-221ENST00000488185 TTC21BQ7Z4L5 1316 aa28.89■■■□□ 2.21
PKD1-221ENST00000488185 NLRP6P59044 892 aa28.87■■■□□ 2.21
PKD1-221ENST00000488185 ZC3H6P61129 1189 aaKnown RBP28.87■■■□□ 2.21
PKD1-221ENST00000488185 AKAP12Q02952 1782 aa28.86■■■□□ 2.21
PKD1-221ENST00000488185 SPATA31A5Q5VU36 1347 aa28.86■■■□□ 2.21
PKD1-221ENST00000488185 SPATA31A7Q8IWB4 1347 aa28.86■■■□□ 2.21
PKD1-221ENST00000488185 SLIT3O75094 1523 aa28.85■■■□□ 2.21
PKD1-221ENST00000488185 KTN1Q86UP2 1357 aaKnown RBP28.85■■■□□ 2.21
PKD1-221ENST00000488185 SEPT12Q8IYM1 358 aa28.84■■■□□ 2.21
PKD1-221ENST00000488185 CCDC9Q9Y3X0 531 aaKnown RBP28.84■■■□□ 2.21
PKD1-221ENST00000488185 CD163L1Q9NR16 1453 aa28.84■■■□□ 2.21
PKD1-221ENST00000488185 CHRNA2Q15822 529 aa28.83■■■□□ 2.21
PKD1-221ENST00000488185 EP400Q96L91 3159 aa28.83■■■□□ 2.21
PKD1-221ENST00000488185 NINLQ9Y2I6 1382 aa28.83■■■□□ 2.21
PKD1-221ENST00000488185 CCDC125Q86Z20 511 aa28.82■■■□□ 2.2
PKD1-221ENST00000488185 PIK3C2AO00443 1686 aa28.82■■■□□ 2.2
PKD1-221ENST00000488185 USP47Q96K76 1375 aa28.81■■■□□ 2.2
PKD1-221ENST00000488185 SLC12A5Q9H2X9 1139 aa28.8■■■□□ 2.2
PKD1-221ENST00000488185 LMO7Q8WWI1 1683 aa28.8■■■□□ 2.2
PKD1-221ENST00000488185 AATKQ6ZMQ8 1374 aa28.79■■■□□ 2.2
PKD1-221ENST00000488185 SPATA31A1Q5TZJ5 1347 aa28.79■■■□□ 2.2
PKD1-221ENST00000488185 TERF2IPQ9NYB0 399 aa28.79■■■□□ 2.2
PKD1-221ENST00000488185 MON2Q7Z3U7 1717 aa28.79■■■□□ 2.2
PKD1-221ENST00000488185 CAMTA1Q9Y6Y1 1673 aa28.79■■■□□ 2.2
PKD1-221ENST00000488185 USP31Q70CQ4 1352 aa28.78■■■□□ 2.2
PKD1-221ENST00000488185 KCNH5Q8NCM2 988 aa28.78■■■□□ 2.2
PKD1-221ENST00000488185 HDGFL2Q7Z4V5 671 aaPredicted RBP28.77■■■□□ 2.2
PKD1-221ENST00000488185 TMC1Q8TDI8 760 aa28.77■■■□□ 2.2
PKD1-221ENST00000488185 FAM98CQ17RN3 349 aaKnown RBP28.76■■■□□ 2.19
PKD1-221ENST00000488185 EDC4Q6P2E9 1401 aaKnown RBP28.75■■■□□ 2.19
PKD1-221ENST00000488185 TMF1P82094 1093 aa28.74■■■□□ 2.19
PKD1-221ENST00000488185 KRT27Q7Z3Y8 459 aa28.74■■■□□ 2.19
PKD1-221ENST00000488185 CCER1Q8TC90 406 aaPredicted RBP28.74■■■□□ 2.19
PKD1-221ENST00000488185 EVA1CP58658 441 aa28.73■■■□□ 2.19
PKD1-221ENST00000488185 ARHGEF25Q86VW2 580 aa28.73■■■□□ 2.19
PKD1-221ENST00000488185 A0A1W2PP64 1363 aa28.73■■■□□ 2.19
PKD1-221ENST00000488185 BARGINQ6ZT62 677 aa28.72■■■□□ 2.19
PKD1-221ENST00000488185 STRN4Q9NRL3 753 aa28.72■■■□□ 2.19
PKD1-221ENST00000488185 COL5A2P05997 1499 aaPredicted RBP28.71■■■□□ 2.19
PKD1-221ENST00000488185 BRWD3Q6RI45 1802 aa28.71■■■□□ 2.19
PKD1-221ENST00000488185 USP54Q70EL1 1684 aa28.7■■■□□ 2.19
PKD1-221ENST00000488185 THSD7AQ9UPZ6 1657 aa28.7■■■□□ 2.19
PKD1-221ENST00000488185 CDCA8Q53HL2 280 aa28.7■■■□□ 2.18
PKD1-221ENST00000488185 THRAP3Q9Y2W1 955 aaKnown RBP28.7■■■□□ 2.18
PKD1-221ENST00000488185 LARP1Q6PKG0 1096 aaKnown RBP28.68■■■□□ 2.18
PKD1-221ENST00000488185 NFAT5O94916 1531 aa28.68■■■□□ 2.18
PKD1-221ENST00000488185 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.67■■■□□ 2.18
PKD1-221ENST00000488185 COL18A1P39060 1754 aa28.67■■■□□ 2.18
PKD1-221ENST00000488185 BLMP54132 1417 aaPredicted RBP28.67■■■□□ 2.18
PKD1-221ENST00000488185 ABCC6O95255 1503 aa28.65■■■□□ 2.18
PKD1-221ENST00000488185 NME9Q86XW9 330 aa28.65■■■□□ 2.18
PKD1-221ENST00000488185 TCP11L2Q8N4U5 519 aa28.65■■■□□ 2.18
PKD1-221ENST00000488185 ANKRD36BQ8N2N9 1353 aa28.64■■■□□ 2.18
PKD1-221ENST00000488185 CRB1P82279 1406 aa28.64■■■□□ 2.18
PKD1-221ENST00000488185 AXIN2Q9Y2T1 843 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms