RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
PKD1-220ENST00000487932 STK3Q13188 491 aa18.34■□□□□ 0.53
PKD1-220ENST00000487932 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
PKD1-220ENST00000487932 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
PKD1-220ENST00000487932 FILIP1LQ4L180 1135 aa18.33■□□□□ 0.53
PKD1-220ENST00000487932 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.52
PKD1-220ENST00000487932 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.52
PKD1-220ENST00000487932 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.52
PKD1-220ENST00000487932 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
PKD1-220ENST00000487932 ENOX2Q16206 610 aaKnown RBP18.32■□□□□ 0.52
PKD1-220ENST00000487932 SMARCE1Q969G3 411 aa18.32■□□□□ 0.52
PKD1-220ENST00000487932 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
PKD1-220ENST00000487932 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
PKD1-220ENST00000487932 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
PKD1-220ENST00000487932 SSBP05455 408 aaKnown RBP eCLIP18.32■□□□□ 0.52
PKD1-220ENST00000487932 ZRSR2Q15696 482 aaKnown RBP18.32■□□□□ 0.52
PKD1-220ENST00000487932 MYL6BP14649 208 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 CABP4P57796 275 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 CLASRPQ8N2M8 674 aaKnown RBP18.31■□□□□ 0.52
PKD1-220ENST00000487932 GPRASP1Q5JY77 1395 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
PKD1-220ENST00000487932 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
PKD1-220ENST00000487932 NUCB2P80303 420 aa18.3■□□□□ 0.52
PKD1-220ENST00000487932 AXDND1Q5T1B0 1012 aaPredicted RBP18.3■□□□□ 0.52
PKD1-220ENST00000487932 DEF6Q9H4E7 631 aa18.3■□□□□ 0.52
PKD1-220ENST00000487932 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
PKD1-220ENST00000487932 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
PKD1-220ENST00000487932 ZNF76P36508 570 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 TSPYL1Q9H0U9 437 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 C22orf23Q9BZE7 217 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 CCDC69A6NI79 296 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 KINO60870 393 aaKnown RBP18.29■□□□□ 0.52
PKD1-220ENST00000487932 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
PKD1-220ENST00000487932 SSR1P43307 286 aaKnown RBP18.28■□□□□ 0.52
PKD1-220ENST00000487932 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
PKD1-220ENST00000487932 USP47Q96K76 1375 aa18.28■□□□□ 0.52
PKD1-220ENST00000487932 USP5P45974 858 aa18.28■□□□□ 0.52
PKD1-220ENST00000487932 STK38Q15208 465 aa18.28■□□□□ 0.52
PKD1-220ENST00000487932 TAX1BP1Q86VP1 789 aa18.27■□□□□ 0.52
PKD1-220ENST00000487932 WDR70Q9NW82 654 aa18.27■□□□□ 0.52
PKD1-220ENST00000487932 TATP17735 454 aaPredicted RBP18.27■□□□□ 0.52
PKD1-220ENST00000487932 CDC45O75419 566 aa18.27■□□□□ 0.52
PKD1-220ENST00000487932 MPHOSPH8Q99549 860 aa18.27■□□□□ 0.51
PKD1-220ENST00000487932 CENPHQ9H3R5 247 aa18.27■□□□□ 0.51
PKD1-220ENST00000487932 ERLIN2O94905 339 aa18.26■□□□□ 0.51
PKD1-220ENST00000487932 ERCC4Q92889 916 aaPredicted RBP18.26■□□□□ 0.51
PKD1-220ENST00000487932 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■■■□ 24.5
PKD1-220ENST00000487932 SPC24Q8NBT2 197 aa18.26■□□□□ 0.51
PKD1-220ENST00000487932 SCLT1Q96NL6 688 aa18.26■□□□□ 0.51
PKD1-220ENST00000487932 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
PKD1-220ENST00000487932 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
PKD1-220ENST00000487932 ZNHIT6Q9NWK9 470 aaKnown RBP18.25■□□□□ 0.51
PKD1-220ENST00000487932 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
PKD1-220ENST00000487932 SERPINC1P01008 464 aa18.25■□□□□ 0.51
PKD1-220ENST00000487932 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
PKD1-220ENST00000487932 CCDC181Q5TID7 509 aa18.24■□□□□ 0.51
PKD1-220ENST00000487932 BAZ1AQ9NRL2 1556 aaPredicted RBP18.24■□□□□ 0.51
PKD1-220ENST00000487932 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
PKD1-220ENST00000487932 FAM177A1Q8N128 213 aaPredicted RBP18.23■□□□□ 0.51
PKD1-220ENST00000487932 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.23■□□□□ 0.51
PKD1-220ENST00000487932 TMEM87AQ8NBN3 555 aa18.23■□□□□ 0.51
PKD1-220ENST00000487932 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
PKD1-220ENST00000487932 FIBPO43427 364 aa18.23■□□□□ 0.51
PKD1-220ENST00000487932 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
PKD1-220ENST00000487932 PTPRGP23470 1445 aa18.22■□□□□ 0.51
PKD1-220ENST00000487932 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
PKD1-220ENST00000487932 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
PKD1-220ENST00000487932 TXNDC2Q86VQ3 553 aa18.22■□□□□ 0.51
PKD1-220ENST00000487932 ERC1Q8IUD2 1116 aa18.22■□□□□ 0.51
PKD1-220ENST00000487932 FAM43AQ8N2R8 423 aa18.22■□□□□ 0.51
PKD1-220ENST00000487932 NEK4P51957 841 aa18.21■□□□□ 0.51
PKD1-220ENST00000487932 CAVIN1Q6NZI2 390 aaKnown RBP18.21■□□□□ 0.51
PKD1-220ENST00000487932 WDR78Q5VTH9 848 aa18.21■□□□□ 0.51
PKD1-220ENST00000487932 RAI14Q9P0K7 980 aa18.21■□□□□ 0.51
PKD1-220ENST00000487932 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
PKD1-220ENST00000487932 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
PKD1-220ENST00000487932 FAM193AP78312 1265 aa18.21■□□□□ 0.51
PKD1-220ENST00000487932 TRIM22Q8IYM9 498 aa18.2■□□□□ 0.5
PKD1-220ENST00000487932 GOLGA6L10A6NI86 522 aa18.2■□□□□ 0.5
PKD1-220ENST00000487932 STIM1Q13586 685 aa18.2■□□□□ 0.5
PKD1-220ENST00000487932 GAS2L2Q8NHY3 880 aa18.2■□□□□ 0.5
PKD1-220ENST00000487932 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
PKD1-220ENST00000487932 CCDC57Q2TAC2 916 aa18.2■□□□□ 0.5
PKD1-220ENST00000487932 XPCQ01831 940 aaPredicted RBP18.19■□□□□ 0.5
PKD1-220ENST00000487932 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
PKD1-220ENST00000487932 PPFIBP1Q86W92 1011 aa18.19■□□□□ 0.5
PKD1-220ENST00000487932 TDO2P48775 406 aa18.19■□□□□ 0.5
PKD1-220ENST00000487932 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
PKD1-220ENST00000487932 PRPF40AO75400 957 aaKnown RBP18.19■□□□□ 0.5
PKD1-220ENST00000487932 GNAI3P08754 354 aa18.19■□□□□ 0.5
PKD1-220ENST00000487932 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
PKD1-220ENST00000487932 DESP17661 470 aa18.18■□□□□ 0.5
PKD1-220ENST00000487932 MPNDQ8N594 471 aa18.18■□□□□ 0.5
PKD1-220ENST00000487932 HIP1O00291 1037 aa18.17■□□□□ 0.5
PKD1-220ENST00000487932 ME1P48163 572 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms