RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 PARD3Q8TEW0 1356 aa10.89□□□□□ -0.67
RBM28-206ENST00000487602 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
RBM28-206ENST00000487602 MST1RQ04912 1400 aa10.88□□□□□ -0.67
RBM28-206ENST00000487602 EDC4Q6P2E9 1401 aaKnown RBP10.88□□□□□ -0.67
RBM28-206ENST00000487602 NSD2O96028 1365 aa10.88□□□□□ -0.67
RBM28-206ENST00000487602 RGPD8O14715 1765 aaPredicted RBP10.88□□□□□ -0.67
RBM28-206ENST00000487602 TTC21BQ7Z4L5 1316 aa10.87□□□□□ -0.67
RBM28-206ENST00000487602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.87□□□□□ -0.67
RBM28-206ENST00000487602 MYBBP1AQ9BQG0 1328 aaKnown RBP10.86□□□□□ -0.67
RBM28-206ENST00000487602 USP6P35125 1406 aa10.86□□□□□ -0.67
RBM28-206ENST00000487602 MORC1Q86VD1 984 aa10.86□□□□□ -0.67
RBM28-206ENST00000487602 GGNBP2Q9H3C7 697 aa10.86□□□□□ -0.67
RBM28-206ENST00000487602 SLAIN2Q9P270 581 aa10.86□□□□□ -0.67
RBM28-206ENST00000487602 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
RBM28-206ENST00000487602 TTC21AQ8NDW8 1320 aa10.85□□□□□ -0.67
RBM28-206ENST00000487602 AKAP12Q02952 1782 aa10.85□□□□□ -0.67
RBM28-206ENST00000487602 SSH2Q76I76 1423 aa10.85□□□□□ -0.67
RBM28-206ENST00000487602 PSME1Q06323 249 aa10.85□□□□□ -0.67
RBM28-206ENST00000487602 NME9Q86XW9 330 aa10.85□□□□□ -0.67
RBM28-206ENST00000487602 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
RBM28-206ENST00000487602 FOXO3O43524 673 aa10.84□□□□□ -0.67
RBM28-206ENST00000487602 PPP2R1AP30153 589 aa10.84□□□□□ -0.67
RBM28-206ENST00000487602 NLRP13Q86W25 1043 aa10.84□□□□□ -0.67
RBM28-206ENST00000487602 NRKQ7Z2Y5 1582 aa10.84□□□□□ -0.67
RBM28-206ENST00000487602 CCDC184Q52MB2 194 aa10.83□□□□□ -0.68
RBM28-206ENST00000487602 BRINP3Q76B58 766 aa10.83□□□□□ -0.68
RBM28-206ENST00000487602 KRT28Q7Z3Y7 464 aa10.83□□□□□ -0.68
RBM28-206ENST00000487602 ZRANB1Q9UGI0 708 aa10.83□□□□□ -0.68
RBM28-206ENST00000487602 NHSL1Q5SYE7 1610 aa10.83□□□□□ -0.68
RBM28-206ENST00000487602 COG3Q96JB2 828 aa10.82□□□□□ -0.68
RBM28-206ENST00000487602 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
RBM28-206ENST00000487602 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
RBM28-206ENST00000487602 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
RBM28-206ENST00000487602 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
RBM28-206ENST00000487602 TNNT2P45379 298 aaPredicted RBP10.81□□□□□ -0.68
RBM28-206ENST00000487602 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
RBM28-206ENST00000487602 KIF20BQ96Q89 1820 aa10.8□□□□□ -0.68
RBM28-206ENST00000487602 XPCQ01831 940 aaPredicted RBP10.8□□□□□ -0.68
RBM28-206ENST00000487602 ABTB2Q8N961 1025 aa10.8□□□□□ -0.68
RBM28-206ENST00000487602 NLRP6P59044 892 aa10.79□□□□□ -0.68
RBM28-206ENST00000487602 DDX17Q92841 729 aaKnown RBP10.79□□□□□ -0.68
RBM28-206ENST00000487602 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
RBM28-206ENST00000487602 OVOS2A0A0J9YW53 1432 aa10.78□□□□□ -0.68
RBM28-206ENST00000487602 OVOS2Q6IE36 1432 aa10.78□□□□□ -0.68
RBM28-206ENST00000487602 TOM1O60784 492 aa10.78□□□□□ -0.68
RBM28-206ENST00000487602 MTHFSP49914 203 aa10.78□□□□□ -0.68
RBM28-206ENST00000487602 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
RBM28-206ENST00000487602 ANKRD26Q9UPS8 1709 aa10.78□□□□□ -0.68
RBM28-206ENST00000487602 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.68
RBM28-206ENST00000487602 AHDC1Q5TGY3 1603 aaPredicted RBP10.77□□□□□ -0.68
RBM28-206ENST00000487602 FBLN1P23142 703 aa10.77□□□□□ -0.69
RBM28-206ENST00000487602 NUTM2GQ5VZR2 741 aa10.77□□□□□ -0.69
RBM28-206ENST00000487602 CERKQ8TCT0 537 aa10.77□□□□□ -0.69
RBM28-206ENST00000487602 PNISRQ8TF01 805 aaKnown RBP10.77□□□□□ -0.69
RBM28-206ENST00000487602 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
RBM28-206ENST00000487602 USP54Q70EL1 1684 aa10.76□□□□□ -0.69
RBM28-206ENST00000487602 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
RBM28-206ENST00000487602 PXDNQ92626 1479 aa10.75□□□□□ -0.69
RBM28-206ENST00000487602 LMOD2Q6P5Q4 547 aa10.75□□□□□ -0.69
RBM28-206ENST00000487602 FAM9BQ8IZU0 186 aa10.75□□□□□ -0.69
RBM28-206ENST00000487602 CFAP53Q96M91 514 aa10.75□□□□□ -0.69
RBM28-206ENST00000487602 SPATA31A3Q5VYP0 1347 aa10.75□□□□□ -0.69
RBM28-206ENST00000487602 PIK3C2AO00443 1686 aa10.74□□□□□ -0.69
RBM28-206ENST00000487602 ALS2Q96Q42 1657 aa10.74□□□□□ -0.69
RBM28-206ENST00000487602 UBAP1LF5GYI3 381 aa10.74□□□□□ -0.69
RBM28-206ENST00000487602 RRS1Q15050 365 aaKnown RBP10.74□□□□□ -0.69
RBM28-206ENST00000487602 EMILIN1Q9Y6C2 1016 aa10.74□□□□□ -0.69
RBM28-206ENST00000487602 PHLPP1O60346 1717 aa10.74□□□□□ -0.69
RBM28-206ENST00000487602 ABCA3Q99758 1704 aa10.73□□□□□ -0.69
RBM28-206ENST00000487602 KCNH5Q8NCM2 988 aa10.73□□□□□ -0.69
RBM28-206ENST00000487602 USP19O94966 1318 aa10.73□□□□□ -0.69
RBM28-206ENST00000487602 INSRP06213 1382 aa10.73□□□□□ -0.69
RBM28-206ENST00000487602 PNPLA6Q8IY17 1366 aa10.73□□□□□ -0.69
RBM28-206ENST00000487602 TNS3Q68CZ2 1445 aa10.73□□□□□ -0.69
RBM28-206ENST00000487602 COL16A1Q07092 1604 aaPredicted RBP10.73□□□□□ -0.69
RBM28-206ENST00000487602 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
RBM28-206ENST00000487602 PPM1GO15355 546 aaPredicted RBP10.72□□□□□ -0.69
RBM28-206ENST00000487602 SOX12O15370 315 aa10.72□□□□□ -0.69
RBM28-206ENST00000487602 GCP02774 474 aa10.72□□□□□ -0.69
RBM28-206ENST00000487602 ARHGEF10O15013 1369 aa10.72□□□□□ -0.69
RBM28-206ENST00000487602 SMG6Q86US8 1419 aaKnown RBP10.72□□□□□ -0.69
RBM28-206ENST00000487602 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
RBM28-206ENST00000487602 PIP4K2BP78356 416 aa10.71□□□□□ -0.69
RBM28-206ENST00000487602 WDR43Q15061 677 aaKnown RBP eCLIP10.71□□□□□ -0.69
RBM28-206ENST00000487602 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.69
RBM28-206ENST00000487602 MAP3K19Q56UN5 1328 aa10.71□□□□□ -0.69
RBM28-206ENST00000487602 LRRC59Q96AG4 307 aaKnown RBP10.71□□□□□ -0.69
RBM28-206ENST00000487602 PHRF1Q9P1Y6 1649 aaKnown RBP10.71□□□□□ -0.69
RBM28-206ENST00000487602 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
RBM28-206ENST00000487602 ADAMTS8Q9UP79 889 aa10.7□□□□□ -0.7
RBM28-206ENST00000487602 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
RBM28-206ENST00000487602 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
RBM28-206ENST00000487602 SHPRHQ149N8 1683 aa10.69□□□□□ -0.7
RBM28-206ENST00000487602 COL22A1Q8NFW1 1626 aaPredicted RBP10.69□□□□□ -0.7
RBM28-206ENST00000487602 SLIT3O75094 1523 aa10.69□□□□□ -0.7
RBM28-206ENST00000487602 AMPHP49418 695 aa10.69□□□□□ -0.7
RBM28-206ENST00000487602 ARHGEF25Q86VW2 580 aa10.69□□□□□ -0.7
RBM28-206ENST00000487602 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
RBM28-206ENST00000487602 COL3A1P02461 1466 aaPredicted RBP10.68□□□□□ -0.7
RBM28-206ENST00000487602 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms