RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 LMOD2Q6P5Q4 547 aa32.26■■■□□ 2.75
SRM-205ENST00000487300 GJD4Q96KN9 370 aaPredicted RBP32.26■■■□□ 2.75
SRM-205ENST00000487300 CCDC61Q9Y6R9 512 aa32.26■■■□□ 2.75
SRM-205ENST00000487300 PLEKHG3A1L390 1219 aa32.24■■■□□ 2.75
SRM-205ENST00000487300 NEUROD1Q13562 356 aa32.24■■■□□ 2.75
SRM-205ENST00000487300 HAP1P54257 671 aaPredicted RBP32.23■■■□□ 2.75
SRM-205ENST00000487300 ACEP12821 1306 aa32.21■■■□□ 2.75
SRM-205ENST00000487300 ROCK2O75116 1388 aaKnown RBP32.2■■■□□ 2.75
SRM-205ENST00000487300 ATAD2Q6PL18 1390 aa32.2■■■□□ 2.75
SRM-205ENST00000487300 NRKQ7Z2Y5 1582 aa32.2■■■□□ 2.75
SRM-205ENST00000487300 PPIP5K1Q6PFW1 1433 aa32.2■■■□□ 2.75
SRM-205ENST00000487300 FAM83GA6ND36 823 aa32.18■■■□□ 2.74
SRM-205ENST00000487300 TRIM26Q12899 539 aaPredicted RBP32.18■■■□□ 2.74
SRM-205ENST00000487300 AKAP12Q02952 1782 aa32.17■■■□□ 2.74
SRM-205ENST00000487300 VPS72Q15906 364 aa32.17■■■□□ 2.74
SRM-205ENST00000487300 NBPF8Q3BBV2 869 aa32.16■■■□□ 2.74
SRM-205ENST00000487300 PLEKHG5O94827 1062 aa32.15■■■□□ 2.74
SRM-205ENST00000487300 PAK3O75914 559 aaPredicted RBP32.14■■■□□ 2.74
SRM-205ENST00000487300 SRPK2P78362 688 aaKnown RBP32.13■■■□□ 2.73
SRM-205ENST00000487300 BRD4O60885 1362 aaPredicted RBP32.12■■■□□ 2.73
SRM-205ENST00000487300 CABP2Q9NPB3 220 aa32.12■■■□□ 2.73
SRM-205ENST00000487300 SBNO2Q9Y2G9 1366 aa32.11■■■□□ 2.73
SRM-205ENST00000487300 LMO7Q8WWI1 1683 aa32.11■■■□□ 2.73
SRM-205ENST00000487300 PIK3C2AO00443 1686 aa32.09■■■□□ 2.73
SRM-205ENST00000487300 USP6P35125 1406 aa32.09■■■□□ 2.73
SRM-205ENST00000487300 ONECUT3O60422 494 aaPredicted RBP32.08■■■□□ 2.73
SRM-205ENST00000487300 THSD7AQ9UPZ6 1657 aa32.08■■■□□ 2.73
SRM-205ENST00000487300 USP19O94966 1318 aa32.07■■■□□ 2.72
SRM-205ENST00000487300 EVC2Q86UK5 1308 aa32.07■■■□□ 2.72
SRM-205ENST00000487300 SSH2Q76I76 1423 aa32.07■■■□□ 2.72
SRM-205ENST00000487300 TONSLQ96HA7 1378 aa32.07■■■□□ 2.72
SRM-205ENST00000487300 BTG4Q9NY30 223 aa32.06■■■□□ 2.72
SRM-205ENST00000487300 MON2Q7Z3U7 1717 aa32.06■■■□□ 2.72
SRM-205ENST00000487300 KIAA0232Q92628 1395 aa32.06■■■□□ 2.72
SRM-205ENST00000487300 SLIT3O75094 1523 aa32.03■■■□□ 2.72
SRM-205ENST00000487300 PRDM11Q9NQV5 511 aa32.01■■■□□ 2.71
SRM-205ENST00000487300 CPDO75976 1380 aa32.01■■■□□ 2.71
SRM-205ENST00000487300 CABP1Q9NZU7 370 aa32■■■□□ 2.71
SRM-205ENST00000487300 SEPT12Q8IYM1 358 aa31.99■■■□□ 2.71
SRM-205ENST00000487300 NUTM2GQ5VZR2 741 aa31.98■■■□□ 2.71
SRM-205ENST00000487300 ABTB2Q8N961 1025 aa31.98■■■□□ 2.71
SRM-205ENST00000487300 USP54Q70EL1 1684 aa31.97■■■□□ 2.71
SRM-205ENST00000487300 CAMTA1Q9Y6Y1 1673 aa31.97■■■□□ 2.71
SRM-205ENST00000487300 SPATA31A5Q5VU36 1347 aa31.97■■■□□ 2.71
SRM-205ENST00000487300 SPATA31A7Q8IWB4 1347 aa31.97■■■□□ 2.71
SRM-205ENST00000487300 CPSF1Q10570 1443 aaKnown RBP31.96■■■□□ 2.71
SRM-205ENST00000487300 CCDC9Q9Y3X0 531 aaKnown RBP31.96■■■□□ 2.71
SRM-205ENST00000487300 CCDC125Q86Z20 511 aa31.94■■■□□ 2.7
SRM-205ENST00000487300 CARD11Q9BXL7 1154 aa31.94■■■□□ 2.7
SRM-205ENST00000487300 COL18A1P39060 1754 aa31.94■■■□□ 2.7
SRM-205ENST00000487300 BLMP54132 1417 aaPredicted RBP31.92■■■□□ 2.7
SRM-205ENST00000487300 NLRP13Q86W25 1043 aa31.92■■■□□ 2.7
SRM-205ENST00000487300 ZC3H6P61129 1189 aaKnown RBP31.91■■■□□ 2.7
SRM-205ENST00000487300 CHRNA2Q15822 529 aa31.91■■■□□ 2.7
SRM-205ENST00000487300 FAM98CQ17RN3 349 aaKnown RBP31.89■■■□□ 2.7
SRM-205ENST00000487300 CD163L1Q9NR16 1453 aa31.89■■■□□ 2.7
SRM-205ENST00000487300 GCP02774 474 aa31.88■■■□□ 2.69
SRM-205ENST00000487300 SPATA31A1Q5TZJ5 1347 aa31.88■■■□□ 2.69
SRM-205ENST00000487300 RGPD1P0DJD0 1748 aa31.87■■■□□ 2.69
SRM-205ENST00000487300 KRT27Q7Z3Y8 459 aa31.87■■■□□ 2.69
SRM-205ENST00000487300 COL5A2P05997 1499 aaPredicted RBP31.86■■■□□ 2.69
SRM-205ENST00000487300 ZNF692Q9BU19 519 aaPredicted RBP31.86■■■□□ 2.69
SRM-205ENST00000487300 WNK3Q9BYP7 1800 aa31.85■■■□□ 2.69
SRM-205ENST00000487300 TNS1Q9HBL0 1735 aaKnown RBP31.85■■■□□ 2.69
SRM-205ENST00000487300 RGPD5Q99666 1765 aa31.84■■■□□ 2.69
SRM-205ENST00000487300 PARP4Q9UKK3 1724 aaKnown RBP31.83■■■□□ 2.69
SRM-205ENST00000487300 TTC21BQ7Z4L5 1316 aa31.83■■■□□ 2.69
SRM-205ENST00000487300 NFAT5O94916 1531 aa31.83■■■□□ 2.69
SRM-205ENST00000487300 TTC21AQ8NDW8 1320 aa31.82■■■□□ 2.68
SRM-205ENST00000487300 NLRP6P59044 892 aa31.81■■■□□ 2.68
SRM-205ENST00000487300 AATKQ6ZMQ8 1374 aa31.8■■■□□ 2.68
SRM-205ENST00000487300 KTN1Q86UP2 1357 aaKnown RBP31.8■■■□□ 2.68
SRM-205ENST00000487300 STRN4Q9NRL3 753 aa31.79■■■□□ 2.68
SRM-205ENST00000487300 ABCC6O95255 1503 aa31.79■■■□□ 2.68
SRM-205ENST00000487300 PUS7Q96PZ0 661 aaKnown RBP31.77■■■□□ 2.68
SRM-205ENST00000487300 TESK2Q96S53 571 aa31.77■■■□□ 2.68
SRM-205ENST00000487300 SRCAPQ6ZRS2 3230 aa31.76■■■□□ 2.68
SRM-205ENST00000487300 A0A0G2JS52 829 aa31.76■■■□□ 2.67
SRM-205ENST00000487300 MYT1Q01538 1121 aa31.76■■■□□ 2.67
SRM-205ENST00000487300 BARGINQ6ZT62 677 aa31.75■■■□□ 2.67
SRM-205ENST00000487300 LTN1O94822 1766 aa31.75■■■□□ 2.67
SRM-205ENST00000487300 LARP1Q6PKG0 1096 aaKnown RBP31.74■■■□□ 2.67
SRM-205ENST00000487300 USP31Q70CQ4 1352 aa31.73■■■□□ 2.67
SRM-205ENST00000487300 CRB1P82279 1406 aa31.73■■■□□ 2.67
SRM-205ENST00000487300 LRRC37A3O60309 1634 aa31.71■■■□□ 2.67
SRM-205ENST00000487300 EDC4Q6P2E9 1401 aaKnown RBP31.71■■■□□ 2.67
SRM-205ENST00000487300 CLSPNQ9HAW4 1339 aa31.71■■■□□ 2.67
SRM-205ENST00000487300 EVA1CP58658 441 aa31.7■■■□□ 2.67
SRM-205ENST00000487300 ST20-MTHFSA0A0A6YYL1 179 aa31.69■■■□□ 2.66
SRM-205ENST00000487300 A0A1W2PP64 1363 aa31.68■■■□□ 2.66
SRM-205ENST00000487300 NINLQ9Y2I6 1382 aa31.68■■■□□ 2.66
SRM-205ENST00000487300 DISP2A7MBM2 1401 aa31.68■■■□□ 2.66
SRM-205ENST00000487300 ARHGEF25Q86VW2 580 aa31.68■■■□□ 2.66
SRM-205ENST00000487300 KCNH5Q8NCM2 988 aa31.68■■■□□ 2.66
SRM-205ENST00000487300 THRAP3Q9Y2W1 955 aaKnown RBP31.68■■■□□ 2.66
SRM-205ENST00000487300 PEAK1Q9H792 1746 aa31.68■■■□□ 2.66
SRM-205ENST00000487300 DEFB132Q7Z7B7 95 aa31.67■■■□□ 2.66
SRM-205ENST00000487300 TCP11L2Q8N4U5 519 aa31.67■■■□□ 2.66
SRM-205ENST00000487300 SLC12A5Q9H2X9 1139 aa31.66■■■□□ 2.66
SRM-205ENST00000487300 USP35Q9P2H5 1018 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms