RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 PSDA5PKW4 1024 aaPredicted RBP28.69■■■□□ 2.18
CHRD-216ENST00000486066 POGKQ9P215 609 aa28.66■■■□□ 2.18
CHRD-216ENST00000486066 EIF3AQ14152 1382 aaKnown RBP28.65■■■□□ 2.18
CHRD-216ENST00000486066 GPRASP1Q5JY77 1395 aa28.65■■■□□ 2.18
CHRD-216ENST00000486066 EN1Q05925 392 aaPredicted RBP28.64■■■□□ 2.18
CHRD-216ENST00000486066 PHRF1Q9P1Y6 1649 aaKnown RBP28.64■■■□□ 2.18
CHRD-216ENST00000486066 HIRIP3Q9BW71 556 aaPredicted RBP28.62■■■□□ 2.17
CHRD-216ENST00000486066 ATP7BP35670 1465 aa28.61■■■□□ 2.17
CHRD-216ENST00000486066 ITSN1Q15811 1721 aa28.61■■■□□ 2.17
CHRD-216ENST00000486066 ARHGEF28Q8N1W1 1705 aaKnown RBP28.61■■■□□ 2.17
CHRD-216ENST00000486066 WASLO00401 505 aaPredicted RBP28.61■■■□□ 2.17
CHRD-216ENST00000486066 FAM182BQ5T319 152 aa28.61■■■□□ 2.17
CHRD-216ENST00000486066 A0A0G2JS52 829 aa28.6■■■□□ 2.17
CHRD-216ENST00000486066 MYT1Q01538 1121 aa28.6■■■□□ 2.17
CHRD-216ENST00000486066 TRAK1Q9UPV9 953 aa28.6■■■□□ 2.17
CHRD-216ENST00000486066 MINK1Q8N4C8 1332 aaPredicted RBP28.59■■■□□ 2.17
CHRD-216ENST00000486066 SPATA31A1Q5TZJ5 1347 aa28.58■■■□□ 2.17
CHRD-216ENST00000486066 RREB1Q92766 1687 aa28.57■■■□□ 2.16
CHRD-216ENST00000486066 TOPAZ1Q8N9V7 1692 aa28.55■■■□□ 2.16
CHRD-216ENST00000486066 CAMKK2Q96RR4 588 aa28.55■■■□□ 2.16
CHRD-216ENST00000486066 KIAA0232Q92628 1395 aa28.54■■■□□ 2.16
CHRD-216ENST00000486066 R3HDM1Q15032 1099 aaKnown RBP28.54■■■□□ 2.16
CHRD-216ENST00000486066 PRDM11Q9NQV5 511 aa28.53■■■□□ 2.16
CHRD-216ENST00000486066 EZH2Q15910 746 aaKnown RBP28.52■■■□□ 2.16
CHRD-216ENST00000486066 LMO7Q8WWI1 1683 aa28.51■■■□□ 2.15
CHRD-216ENST00000486066 NUP188Q5SRE5 1749 aa28.5■■■□□ 2.15
CHRD-216ENST00000486066 NGDNQ8NEJ9 315 aaKnown RBP28.5■■■□□ 2.15
CHRD-216ENST00000486066 NRKQ7Z2Y5 1582 aa28.5■■■□□ 2.15
CHRD-216ENST00000486066 PARD3Q8TEW0 1356 aa28.5■■■□□ 2.15
CHRD-216ENST00000486066 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
CHRD-216ENST00000486066 POLR3AO14802 1390 aaPredicted RBP28.49■■■□□ 2.15
CHRD-216ENST00000486066 FAM196AQ6ZSG2 479 aa28.47■■■□□ 2.15
CHRD-216ENST00000486066 PAK3O75914 559 aaPredicted RBP28.46■■■□□ 2.15
CHRD-216ENST00000486066 NUDT16Q96DE0 195 aaKnown RBP28.46■■■□□ 2.15
CHRD-216ENST00000486066 STAC3Q96MF2 364 aa28.46■■■□□ 2.15
CHRD-216ENST00000486066 CAMTA1Q9Y6Y1 1673 aa28.45■■■□□ 2.15
CHRD-216ENST00000486066 SSH2Q76I76 1423 aa28.45■■■□□ 2.15
CHRD-216ENST00000486066 CHRNA2Q15822 529 aa28.45■■■□□ 2.14
CHRD-216ENST00000486066 TRIM37O94972 964 aa28.44■■■□□ 2.14
CHRD-216ENST00000486066 BARGINQ6ZT62 677 aa28.44■■■□□ 2.14
CHRD-216ENST00000486066 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
CHRD-216ENST00000486066 CPDO75976 1380 aa28.41■■■□□ 2.14
CHRD-216ENST00000486066 PARP4Q9UKK3 1724 aaKnown RBP28.4■■■□□ 2.14
CHRD-216ENST00000486066 KDM2AQ9Y2K7 1162 aa28.4■■■□□ 2.14
CHRD-216ENST00000486066 STRN4Q9NRL3 753 aa28.39■■■□□ 2.14
CHRD-216ENST00000486066 USP19O94966 1318 aa28.39■■■□□ 2.13
CHRD-216ENST00000486066 KIAA1210Q9ULL0 1709 aa28.38■■■□□ 2.13
CHRD-216ENST00000486066 ZC3H6P61129 1189 aaKnown RBP28.38■■■□□ 2.13
CHRD-216ENST00000486066 PLEKHG3A1L390 1219 aa28.37■■■□□ 2.13
CHRD-216ENST00000486066 APBA3O96018 575 aa28.37■■■□□ 2.13
CHRD-216ENST00000486066 PEAK1Q9H792 1746 aa28.37■■■□□ 2.13
CHRD-216ENST00000486066 ACEP12821 1306 aa28.37■■■□□ 2.13
CHRD-216ENST00000486066 NBPF8Q3BBV2 869 aa28.36■■■□□ 2.13
CHRD-216ENST00000486066 CDK19Q9BWU1 502 aa28.35■■■□□ 2.13
CHRD-216ENST00000486066 RGPD3A6NKT7 1758 aaPredicted RBP28.34■■■□□ 2.13
CHRD-216ENST00000486066 RGPD4Q7Z3J3 1758 aa28.34■■■□□ 2.13
CHRD-216ENST00000486066 NUTM2GQ5VZR2 741 aa28.33■■■□□ 2.13
CHRD-216ENST00000486066 LARP1Q6PKG0 1096 aaKnown RBP28.33■■■□□ 2.13
CHRD-216ENST00000486066 CCDC61Q9Y6R9 512 aa28.33■■■□□ 2.13
CHRD-216ENST00000486066 COL5A2P05997 1499 aaPredicted RBP28.32■■■□□ 2.12
CHRD-216ENST00000486066 TCP11L2Q8N4U5 519 aa28.31■■■□□ 2.12
CHRD-216ENST00000486066 USP35Q9P2H5 1018 aa28.31■■■□□ 2.12
CHRD-216ENST00000486066 SBF2Q86WG5 1849 aa28.31■■■□□ 2.12
CHRD-216ENST00000486066 THRAP3Q9Y2W1 955 aaKnown RBP28.29■■■□□ 2.12
CHRD-216ENST00000486066 PDE3BQ13370 1112 aa28.28■■■□□ 2.12
CHRD-216ENST00000486066 LRRC37A3O60309 1634 aa28.26■■■□□ 2.11
CHRD-216ENST00000486066 EVA1CP58658 441 aa28.26■■■□□ 2.11
CHRD-216ENST00000486066 UTRNP46939 3433 aa28.25■■■□□ 2.11
CHRD-216ENST00000486066 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
CHRD-216ENST00000486066 COL18A1P39060 1754 aa28.24■■■□□ 2.11
CHRD-216ENST00000486066 SLIT3O75094 1523 aa28.24■■■□□ 2.11
CHRD-216ENST00000486066 CASZ1Q86V15 1759 aa28.24■■■□□ 2.11
CHRD-216ENST00000486066 WNK3Q9BYP7 1800 aa28.23■■■□□ 2.11
CHRD-216ENST00000486066 GCP02774 474 aa28.23■■■□□ 2.11
CHRD-216ENST00000486066 BRD4O60885 1362 aaPredicted RBP28.23■■■□□ 2.11
CHRD-216ENST00000486066 CRB1P82279 1406 aa28.22■■■□□ 2.11
CHRD-216ENST00000486066 NBPF14Q5TI25 921 aa28.21■■■□□ 2.11
CHRD-216ENST00000486066 OVOS2A0A0G2JMS6 1433 aa28.2■■■□□ 2.11
CHRD-216ENST00000486066 OVOS2A0A0J9YW53 1432 aa28.2■■■□□ 2.11
CHRD-216ENST00000486066 OVOS2Q6IE36 1432 aa28.2■■■□□ 2.11
CHRD-216ENST00000486066 PPIP5K1Q6PFW1 1433 aa28.2■■■□□ 2.11
CHRD-216ENST00000486066 NLRP13Q86W25 1043 aa28.19■■■□□ 2.1
CHRD-216ENST00000486066 C11orf95C9JLR9 678 aaPredicted RBP28.18■■■□□ 2.1
CHRD-216ENST00000486066 AATKQ6ZMQ8 1374 aa28.18■■■□□ 2.1
CHRD-216ENST00000486066 NINLQ9Y2I6 1382 aa28.18■■■□□ 2.1
CHRD-216ENST00000486066 NBPF1Q3BBV0 1214 aa28.17■■■□□ 2.1
CHRD-216ENST00000486066 PIK3C2AO00443 1686 aa28.16■■■□□ 2.1
CHRD-216ENST00000486066 PLSCR1O15162 318 aa28.16■■■□□ 2.1
CHRD-216ENST00000486066 KCNQ2O43526 872 aa28.16■■■□□ 2.1
CHRD-216ENST00000486066 SPON1Q9HCB6 807 aa28.16■■■□□ 2.1
CHRD-216ENST00000486066 BCL9O00512 1426 aa28.16■■■□□ 2.1
CHRD-216ENST00000486066 USP6P35125 1406 aa28.16■■■□□ 2.1
CHRD-216ENST00000486066 YY1P25490 414 aa28.15■■■□□ 2.1
CHRD-216ENST00000486066 QRICH2Q9H0J4 1663 aa28.14■■■□□ 2.1
CHRD-216ENST00000486066 ANO8Q9HCE9 1232 aaPredicted RBP28.12■■■□□ 2.09
CHRD-216ENST00000486066 PTF1AQ7RTS3 328 aa28.1■■■□□ 2.09
CHRD-216ENST00000486066 AKAP12Q02952 1782 aa28.09■■■□□ 2.09
CHRD-216ENST00000486066 CABP2Q9NPB3 220 aa28.09■■■□□ 2.09
CHRD-216ENST00000486066 CENPJQ9HC77 1338 aaPredicted RBP28.09■■■□□ 2.09
CHRD-216ENST00000486066 PROM2Q8N271 834 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms