RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.7
CPNE1-226ENST00000486021 TRIM26Q12899 539 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-226ENST00000486021 VPS72Q15906 364 aa10.64□□□□□ -0.71
CPNE1-226ENST00000486021 NLRP13Q86W25 1043 aa10.64□□□□□ -0.71
CPNE1-226ENST00000486021 ROCK2O75116 1388 aaKnown RBP10.64□□□□□ -0.71
CPNE1-226ENST00000486021 TONSLQ96HA7 1378 aa10.64□□□□□ -0.71
CPNE1-226ENST00000486021 A0A0G2JS52 829 aa10.63□□□□□ -0.71
CPNE1-226ENST00000486021 PLEKHG3A1L390 1219 aa10.63□□□□□ -0.71
CPNE1-226ENST00000486021 MYT1Q01538 1121 aa10.63□□□□□ -0.71
CPNE1-226ENST00000486021 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
CPNE1-226ENST00000486021 ZNF692Q9BU19 519 aaPredicted RBP10.63□□□□□ -0.71
CPNE1-226ENST00000486021 BRWD3Q6RI45 1802 aa10.63□□□□□ -0.71
CPNE1-226ENST00000486021 ABTB2Q8N961 1025 aa10.62□□□□□ -0.71
CPNE1-226ENST00000486021 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
CPNE1-226ENST00000486021 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-226ENST00000486021 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
CPNE1-226ENST00000486021 CRYBG1Q9Y4K1 1723 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 ACEP12821 1306 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 PRR36Q9H6K5 1346 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 PLEKHG5O94827 1062 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 NBPF8Q3BBV2 869 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 NRAPQ86VF7 1730 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
CPNE1-226ENST00000486021 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-226ENST00000486021 EVA1CP58658 441 aa10.6□□□□□ -0.71
CPNE1-226ENST00000486021 BTG4Q9NY30 223 aa10.6□□□□□ -0.71
CPNE1-226ENST00000486021 GLI3P10071 1580 aa10.6□□□□□ -0.71
CPNE1-226ENST00000486021 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
CPNE1-226ENST00000486021 AKAP12Q02952 1782 aa10.59□□□□□ -0.71
CPNE1-226ENST00000486021 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
CPNE1-226ENST00000486021 ONECUT3O60422 494 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-226ENST00000486021 KRT27Q7Z3Y8 459 aa10.58□□□□□ -0.72
CPNE1-226ENST00000486021 SEPT12Q8IYM1 358 aa10.58□□□□□ -0.72
CPNE1-226ENST00000486021 SIN3AQ96ST3 1273 aa10.58□□□□□ -0.72
CPNE1-226ENST00000486021 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
CPNE1-226ENST00000486021 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-226ENST00000486021 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
CPNE1-226ENST00000486021 CARD11Q9BXL7 1154 aa10.57□□□□□ -0.72
CPNE1-226ENST00000486021 SBNO2Q9Y2G9 1366 aa10.56□□□□□ -0.72
CPNE1-226ENST00000486021 BAG6P46379 1132 aa10.56□□□□□ -0.72
CPNE1-226ENST00000486021 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
CPNE1-226ENST00000486021 THRAP3Q9Y2W1 955 aaKnown RBP10.56□□□□□ -0.72
CPNE1-226ENST00000486021 TTC21AQ8NDW8 1320 aa10.56□□□□□ -0.72
CPNE1-226ENST00000486021 NLRP6P59044 892 aa10.55□□□□□ -0.72
CPNE1-226ENST00000486021 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
CPNE1-226ENST00000486021 CPDO75976 1380 aa10.54□□□□□ -0.72
CPNE1-226ENST00000486021 USP6P35125 1406 aa10.54□□□□□ -0.72
CPNE1-226ENST00000486021 ZC3H6P61129 1189 aaKnown RBP10.54□□□□□ -0.72
CPNE1-226ENST00000486021 HDGFL2Q7Z4V5 671 aaPredicted RBP10.54□□□□□ -0.72
CPNE1-226ENST00000486021 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
CPNE1-226ENST00000486021 SPATA31A5Q5VU36 1347 aa10.54□□□□□ -0.72
CPNE1-226ENST00000486021 SPATA31A7Q8IWB4 1347 aa10.54□□□□□ -0.72
CPNE1-226ENST00000486021 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 NRKQ7Z2Y5 1582 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 GCP02774 474 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 FAM98CQ17RN3 349 aaKnown RBP10.53□□□□□ -0.72
CPNE1-226ENST00000486021 STRN4Q9NRL3 753 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 TERF2IPQ9NYB0 399 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 MON2Q7Z3U7 1717 aa10.53□□□□□ -0.72
CPNE1-226ENST00000486021 CDCA8Q53HL2 280 aa10.52□□□□□ -0.73
CPNE1-226ENST00000486021 NUTM2GQ5VZR2 741 aa10.52□□□□□ -0.73
CPNE1-226ENST00000486021 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
CPNE1-226ENST00000486021 USP19O94966 1318 aa10.52□□□□□ -0.73
CPNE1-226ENST00000486021 CLSPNQ9HAW4 1339 aa10.52□□□□□ -0.73
CPNE1-226ENST00000486021 KTN1Q86UP2 1357 aaKnown RBP10.52□□□□□ -0.73
CPNE1-226ENST00000486021 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
CPNE1-226ENST00000486021 FAM196AQ6ZSG2 479 aa10.51□□□□□ -0.73
CPNE1-226ENST00000486021 CDCA7Q9BWT1 371 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-226ENST00000486021 SPATA31A1Q5TZJ5 1347 aa10.51□□□□□ -0.73
CPNE1-226ENST00000486021 THSD7AQ9UPZ6 1657 aa10.5□□□□□ -0.73
CPNE1-226ENST00000486021 CHRNA2Q15822 529 aa10.5□□□□□ -0.73
CPNE1-226ENST00000486021 TCP11L2Q8N4U5 519 aa10.5□□□□□ -0.73
CPNE1-226ENST00000486021 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
CPNE1-226ENST00000486021 PARP4Q9UKK3 1724 aaKnown RBP10.5□□□□□ -0.73
CPNE1-226ENST00000486021 SSH2Q76I76 1423 aa10.5□□□□□ -0.73
CPNE1-226ENST00000486021 SLIT3O75094 1523 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 ABCC6O95255 1503 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 PIK3C2AO00443 1686 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 TTC21BQ7Z4L5 1316 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 AATKQ6ZMQ8 1374 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 CRB1P82279 1406 aa10.49□□□□□ -0.73
CPNE1-226ENST00000486021 USP54Q70EL1 1684 aa10.48□□□□□ -0.73
CPNE1-226ENST00000486021 LTN1O94822 1766 aa10.48□□□□□ -0.73
CPNE1-226ENST00000486021 USP35Q9P2H5 1018 aa10.48□□□□□ -0.73
CPNE1-226ENST00000486021 WNK3Q9BYP7 1800 aa10.47□□□□□ -0.73
CPNE1-226ENST00000486021 CSB-PGBD3P0DP91 1061 aa10.47□□□□□ -0.73
CPNE1-226ENST00000486021 TMF1P82094 1093 aa10.47□□□□□ -0.73
CPNE1-226ENST00000486021 TOM1L2Q6ZVM7 507 aa10.47□□□□□ -0.73
CPNE1-226ENST00000486021 PARD3Q8TEW0 1356 aa10.47□□□□□ -0.73
CPNE1-226ENST00000486021 CPSF1Q10570 1443 aaKnown RBP10.47□□□□□ -0.73
CPNE1-226ENST00000486021 CAMTA1Q9Y6Y1 1673 aa10.47□□□□□ -0.73
CPNE1-226ENST00000486021 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms