RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 NUTM2GQ5VZR2 741 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-223ENST00000485796 TERF2IPQ9NYB0 399 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
HDAC7-223ENST00000485796 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
HDAC7-223ENST00000485796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.56■□□□□ 0.4
HDAC7-223ENST00000485796 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
HDAC7-223ENST00000485796 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
HDAC7-223ENST00000485796 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
HDAC7-223ENST00000485796 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
HDAC7-223ENST00000485796 NME9Q86XW9 330 aa17.54■□□□□ 0.4
HDAC7-223ENST00000485796 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
HDAC7-223ENST00000485796 PNPLA6Q8IY17 1366 aa17.53■□□□□ 0.4
HDAC7-223ENST00000485796 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
HDAC7-223ENST00000485796 CABLES1Q8TDN4 633 aa17.52■□□□□ 0.4
HDAC7-223ENST00000485796 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.4
HDAC7-223ENST00000485796 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.39
HDAC7-223ENST00000485796 ABTB2Q8N961 1025 aa17.51■□□□□ 0.39
HDAC7-223ENST00000485796 NRKQ7Z2Y5 1582 aa17.5■□□□□ 0.39
HDAC7-223ENST00000485796 EDC4Q6P2E9 1401 aaKnown RBP17.5■□□□□ 0.39
HDAC7-223ENST00000485796 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-223ENST00000485796 JCADQ9P266 1359 aa17.5■□□□□ 0.39
HDAC7-223ENST00000485796 ALS2Q96Q42 1657 aa17.49■□□□□ 0.39
HDAC7-223ENST00000485796 FYB1O15117 783 aa17.49■□□□□ 0.39
HDAC7-223ENST00000485796 NLRP6P59044 892 aa17.48■□□□□ 0.39
HDAC7-223ENST00000485796 TTC21AQ8NDW8 1320 aa17.47■□□□□ 0.39
HDAC7-223ENST00000485796 NUTM2BA6NNL0 878 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-223ENST00000485796 NUTM2EB1AL46 878 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-223ENST00000485796 NUTM2AQ8IVF1 878 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-223ENST00000485796 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
HDAC7-223ENST00000485796 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
HDAC7-223ENST00000485796 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
HDAC7-223ENST00000485796 ARHGEF10O15013 1369 aa17.46■□□□□ 0.39
HDAC7-223ENST00000485796 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-223ENST00000485796 FBLN1P23142 703 aa17.45■□□□□ 0.38
HDAC7-223ENST00000485796 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-223ENST00000485796 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-223ENST00000485796 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
HDAC7-223ENST00000485796 USP19O94966 1318 aa17.44■□□□□ 0.38
HDAC7-223ENST00000485796 SOX12O15370 315 aa17.43■□□□□ 0.38
HDAC7-223ENST00000485796 KNSTRNQ9Y448 316 aa17.43■□□□□ 0.38
HDAC7-223ENST00000485796 LRP6O75581 1613 aa17.43■□□□□ 0.38
HDAC7-223ENST00000485796 SHPRHQ149N8 1683 aa17.42■□□□□ 0.38
HDAC7-223ENST00000485796 MARF1Q9Y4F3 1742 aaKnown RBP17.42■□□□□ 0.38
HDAC7-223ENST00000485796 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
HDAC7-223ENST00000485796 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
HDAC7-223ENST00000485796 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
HDAC7-223ENST00000485796 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
HDAC7-223ENST00000485796 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
HDAC7-223ENST00000485796 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
HDAC7-223ENST00000485796 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
HDAC7-223ENST00000485796 GCP02774 474 aa17.4■□□□□ 0.38
HDAC7-223ENST00000485796 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
HDAC7-223ENST00000485796 COG3Q96JB2 828 aa17.39■□□□□ 0.37
HDAC7-223ENST00000485796 SPATA31A6Q5VVP1 1343 aa17.39■□□□□ 0.37
HDAC7-223ENST00000485796 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
HDAC7-223ENST00000485796 SLIT3O75094 1523 aa17.37■□□□□ 0.37
HDAC7-223ENST00000485796 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-223ENST00000485796 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
HDAC7-223ENST00000485796 ABCA3Q99758 1704 aa17.37■□□□□ 0.37
HDAC7-223ENST00000485796 KIF20BQ96Q89 1820 aa17.36■□□□□ 0.37
HDAC7-223ENST00000485796 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
HDAC7-223ENST00000485796 FAM83GA6ND36 823 aa17.36■□□□□ 0.37
HDAC7-223ENST00000485796 CHRNA2Q15822 529 aa17.36■□□□□ 0.37
HDAC7-223ENST00000485796 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
HDAC7-223ENST00000485796 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
HDAC7-223ENST00000485796 NFAT5O94916 1531 aa17.35■□□□□ 0.37
HDAC7-223ENST00000485796 RRS1Q15050 365 aaKnown RBP17.34■□□□□ 0.37
HDAC7-223ENST00000485796 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
HDAC7-223ENST00000485796 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
HDAC7-223ENST00000485796 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.36
HDAC7-223ENST00000485796 C8orf37Q96NL8 207 aa17.33■□□□□ 0.36
HDAC7-223ENST00000485796 NSD2O96028 1365 aa17.32■□□□□ 0.36
HDAC7-223ENST00000485796 NPC1L1Q9UHC9 1359 aa17.32■□□□□ 0.36
HDAC7-223ENST00000485796 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
HDAC7-223ENST00000485796 MEX3CQ5U5Q3 659 aaKnown RBP17.31■□□□□ 0.36
HDAC7-223ENST00000485796 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
HDAC7-223ENST00000485796 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
HDAC7-223ENST00000485796 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
HDAC7-223ENST00000485796 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
HDAC7-223ENST00000485796 CPDO75976 1380 aa17.29■□□□□ 0.36
HDAC7-223ENST00000485796 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
HDAC7-223ENST00000485796 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
HDAC7-223ENST00000485796 ANKRD26Q9UPS8 1709 aa17.27■□□□□ 0.36
HDAC7-223ENST00000485796 BTG4Q9NY30 223 aa17.27■□□□□ 0.36
HDAC7-223ENST00000485796 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.36
HDAC7-223ENST00000485796 AFF2P51816 1311 aa17.26■□□□□ 0.35
HDAC7-223ENST00000485796 FNBP4Q8N3X1 1017 aaPredicted RBP17.26■□□□□ 0.35
HDAC7-223ENST00000485796 AATKQ6ZMQ8 1374 aa17.26■□□□□ 0.35
HDAC7-223ENST00000485796 COL18A1P39060 1754 aa17.25■□□□□ 0.35
HDAC7-223ENST00000485796 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
HDAC7-223ENST00000485796 CAMTA1Q9Y6Y1 1673 aa17.25■□□□□ 0.35
HDAC7-223ENST00000485796 SLIT2O94813 1529 aa17.25■□□□□ 0.35
HDAC7-223ENST00000485796 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
HDAC7-223ENST00000485796 BCL9LQ86UU0 1499 aa17.24■□□□□ 0.35
HDAC7-223ENST00000485796 PEAK1Q9H792 1746 aa17.24■□□□□ 0.35
HDAC7-223ENST00000485796 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
HDAC7-223ENST00000485796 HOXC9P31274 260 aa17.24■□□□□ 0.35
HDAC7-223ENST00000485796 AMPHP49418 695 aa17.24■□□□□ 0.35
HDAC7-223ENST00000485796 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms