RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
KPNA1-208ENST00000485027 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
KPNA1-208ENST00000485027 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 FAM43BQ6ZT52 329 aaPredicted RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 ZSWIM4Q9H7M6 989 aa8.19□□□□□ -1.1
KPNA1-208ENST00000485027 DMGDHQ9UI17 866 aaKnown RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 NOVA2Q9UNW9 492 aaKnown RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 FOXD4Q12950 439 aaPredicted RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 HSP90AB2PQ58FF8 381 aa8.19□□□□□ -1.1
KPNA1-208ENST00000485027 METTL16Q86W50 562 aaKnown RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 NT5DC4Q86YG4 428 aa8.19□□□□□ -1.1
KPNA1-208ENST00000485027 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
KPNA1-208ENST00000485027 ATP2B1P20020 1258 aa8.18□□□□□ -1.1
KPNA1-208ENST00000485027 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
KPNA1-208ENST00000485027 L3MBTL3Q96JM7 780 aaPredicted RBP8.18□□□□□ -1.1
KPNA1-208ENST00000485027 CDHR5Q9HBB8 845 aa8.18□□□□□ -1.1
KPNA1-208ENST00000485027 PNMA2Q9UL42 364 aa8.18□□□□□ -1.1
KPNA1-208ENST00000485027 IBSPP21815 317 aaPredicted RBP8.17□□□□□ -1.1
KPNA1-208ENST00000485027 APLP1P51693 650 aa8.17□□□□□ -1.1
KPNA1-208ENST00000485027 PLEKHG6Q3KR16 790 aa8.17□□□□□ -1.1
KPNA1-208ENST00000485027 IFNL1Q8IU54 200 aa8.17□□□□□ -1.1
KPNA1-208ENST00000485027 RPUSD2Q8IZ73 545 aaKnown RBP8.17□□□□□ -1.1
KPNA1-208ENST00000485027 NPDC1Q9NQX5 325 aaPredicted RBP8.17□□□□□ -1.1
KPNA1-208ENST00000485027 G3BP2Q9UN86 482 aaKnown RBP8.17□□□□□ -1.1
KPNA1-208ENST00000485027 LONRF3Q496Y0 759 aa8.17□□□□□ -1.1
KPNA1-208ENST00000485027 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
KPNA1-208ENST00000485027 COL4A3BPQ9Y5P4 624 aa8.17□□□□□ -1.1
KPNA1-208ENST00000485027 CCDC146Q8IYE0 955 aa8.16□□□□□ -1.1
KPNA1-208ENST00000485027 IRF2BPLQ9H1B7 796 aa8.16□□□□□ -1.1
KPNA1-208ENST00000485027 RPS6KL1Q9Y6S9 549 aa8.16□□□□□ -1.1
KPNA1-208ENST00000485027 ATP9BO43861 1147 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 EIF3JO75822 258 aaKnown RBP8.15□□□□□ -1.1
KPNA1-208ENST00000485027 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 BMS1Q14692 1282 aaKnown RBP8.15□□□□□ -1.1
KPNA1-208ENST00000485027 ZFYVE27Q5T4F4 411 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 STAG1Q8WVM7 1258 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 SPIRE2Q8WWL2 714 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 CAPN10Q9HC96 672 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
KPNA1-208ENST00000485027 SH3BP5O60239 455 aa8.15□□□□□ -1.11
KPNA1-208ENST00000485027 PRR29P0C7W0 189 aa8.15□□□□□ -1.11
KPNA1-208ENST00000485027 TNNI2P48788 182 aa8.15□□□□□ -1.11
KPNA1-208ENST00000485027 ZNF746Q6NUN9 644 aaPredicted RBP8.15□□□□□ -1.11
KPNA1-208ENST00000485027 MRPL42Q9Y6G3 142 aaKnown RBP8.15□□□□□ -1.11
KPNA1-208ENST00000485027 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
KPNA1-208ENST00000485027 PPP1R3GB7ZBB8 358 aa8.14□□□□□ -1.11
KPNA1-208ENST00000485027 METTL3Q86U44 580 aaKnown RBP8.14□□□□□ -1.11
KPNA1-208ENST00000485027 MAF1Q9H063 256 aa8.14□□□□□ -1.11
KPNA1-208ENST00000485027 PCDH12Q9NPG4 1184 aa8.14□□□□□ -1.11
KPNA1-208ENST00000485027 LILRB3O75022 631 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 PTGER2P43116 358 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 MAP3K9P80192 1104 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 BRINP2Q9C0B6 783 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 SPTLC1O15269 473 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 DSG3P32926 999 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
KPNA1-208ENST00000485027 TSHZ1Q6ZSZ6 1077 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 SLC43A3Q8NBI5 491 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 ACBD3Q9H3P7 528 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 PCDHB15Q9Y5E8 787 aa8.13□□□□□ -1.11
KPNA1-208ENST00000485027 MAPK1P28482 360 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 DNAJA1P31689 397 aaKnown RBP8.12□□□□□ -1.11
KPNA1-208ENST00000485027 TBX4P57082 545 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 DIXDC1Q155Q3 683 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 TUSC1Q2TAM9 212 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 ASB16Q96NS5 453 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 IFT57Q9NWB7 429 aa8.12□□□□□ -1.11
KPNA1-208ENST00000485027 TARBP1Q13395 1621 aaKnown RBP8.11□□□□□ -1.11
KPNA1-208ENST00000485027 RHBDL3P58872 404 aa8.11□□□□□ -1.11
KPNA1-208ENST00000485027 GRIPAP1Q4V328 841 aa8.11□□□□□ -1.11
KPNA1-208ENST00000485027 CLEC4GQ6UXB4 293 aa8.11□□□□□ -1.11
KPNA1-208ENST00000485027 ANO2Q9NQ90 1003 aa8.11□□□□□ -1.11
KPNA1-208ENST00000485027 CCDC61Q9Y6R9 512 aa8.11□□□□□ -1.11
KPNA1-208ENST00000485027 HOXA2O43364 376 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 FOXK1P85037 733 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 RBL2Q08999 1139 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
KPNA1-208ENST00000485027 OS9Q13438 667 aaPredicted RBP8.1□□□□□ -1.11
KPNA1-208ENST00000485027 C4orf46Q504U0 113 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 CRTC2Q53ET0 693 aaPredicted RBP8.1□□□□□ -1.11
KPNA1-208ENST00000485027 FILIP1Q7Z7B0 1213 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 CABLES1Q8TDN4 633 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 ARMC5Q96C12 935 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 CLEC11AQ9Y240 323 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 WDR97A6NE52 1622 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 H3BRB1 525 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 PIK3CDO00329 1044 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 ATP2B4P23634 1241 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 AAMPQ13685 434 aa8.1□□□□□ -1.11
KPNA1-208ENST00000485027 ZCRB1Q8TBF4 217 aaKnown RBP8.1□□□□□ -1.11
KPNA1-208ENST00000485027 CLP1Q92989 425 aaKnown RBP8.1□□□□□ -1.11
KPNA1-208ENST00000485027 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
KPNA1-208ENST00000485027 EIF4G3O43432 1585 aaKnown RBP8.09□□□□□ -1.11
KPNA1-208ENST00000485027 ABCC8Q09428 1581 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 MAMSTRQ6ZN01 415 aa8.09□□□□□ -1.11
KPNA1-208ENST00000485027 C11orf96Q7Z7L8 435 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms