RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 PRM3Q9NNZ6 103 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 CWC15Q9P013 229 aaKnown RBP18.23■□□□□ 0.51
RXRA-203ENST00000484822 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 ESPNB1AK53 854 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 H0YHG0 523 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 MBD3O95983 291 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 VPS53Q5VIR6 699 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 TRIM29Q14134 588 aa18.22■□□□□ 0.51
RXRA-203ENST00000484822 NECTIN2Q92692 538 aa18.22■□□□□ 0.51
RXRA-203ENST00000484822 APPP05067 770 aa18.22■□□□□ 0.51
RXRA-203ENST00000484822 TSPY26PQ9H489 355 aa18.22■□□□□ 0.51
RXRA-203ENST00000484822 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
RXRA-203ENST00000484822 AK7Q96M32 723 aa18.22■□□□□ 0.51
RXRA-203ENST00000484822 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
RXRA-203ENST00000484822 SYNE3Q6ZMZ3 975 aa18.21■□□□□ 0.51
RXRA-203ENST00000484822 RNF20Q5VTR2 975 aa18.21■□□□□ 0.51
RXRA-203ENST00000484822 NBPF8Q3BBV2 869 aa18.21■□□□□ 0.51
RXRA-203ENST00000484822 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
RXRA-203ENST00000484822 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
RXRA-203ENST00000484822 UQCRHLA0A096LP55 91 aa18.2■□□□□ 0.5
RXRA-203ENST00000484822 UQCRHP07919 91 aa18.2■□□□□ 0.5
RXRA-203ENST00000484822 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
RXRA-203ENST00000484822 SPC24Q8NBT2 197 aa18.2■□□□□ 0.5
RXRA-203ENST00000484822 GPRASP1Q5JY77 1395 aa18.2■□□□□ 0.5
RXRA-203ENST00000484822 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
RXRA-203ENST00000484822 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
RXRA-203ENST00000484822 SDF4Q9BRK5 362 aa18.19■□□□□ 0.5
RXRA-203ENST00000484822 NOL10Q9BSC4 688 aaKnown RBP18.19■□□□□ 0.5
RXRA-203ENST00000484822 C9orf78Q9NZ63 289 aaPredicted RBP18.19■□□□□ 0.5
RXRA-203ENST00000484822 PDILTQ8N807 584 aa18.19■□□□□ 0.5
RXRA-203ENST00000484822 NLRP6P59044 892 aa18.19■□□□□ 0.5
RXRA-203ENST00000484822 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
RXRA-203ENST00000484822 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
RXRA-203ENST00000484822 HOOK1Q9UJC3 728 aaKnown RBP18.18■□□□□ 0.5
RXRA-203ENST00000484822 ANKLE2Q86XL3 938 aa18.18■□□□□ 0.5
RXRA-203ENST00000484822 NEK4P51957 841 aa18.17■□□□□ 0.5
RXRA-203ENST00000484822 AMOTL1Q8IY63 956 aa18.17■□□□□ 0.5
RXRA-203ENST00000484822 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
RXRA-203ENST00000484822 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
RXRA-203ENST00000484822 TTLL5Q6EMB2 1281 aa18.17■□□□□ 0.5
RXRA-203ENST00000484822 AAMPQ13685 434 aa18.16■□□□□ 0.5
RXRA-203ENST00000484822 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
RXRA-203ENST00000484822 FIBPO43427 364 aa18.16■□□□□ 0.5
RXRA-203ENST00000484822 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
RXRA-203ENST00000484822 SKIDA1Q1XH10 827 aa18.16■□□□□ 0.5
RXRA-203ENST00000484822 RRP12Q5JTH9 1297 aaKnown RBP18.16■□□□□ 0.5
RXRA-203ENST00000484822 NAP1L1P55209 391 aaKnown RBP18.16■□□□□ 0.5
RXRA-203ENST00000484822 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
RXRA-203ENST00000484822 TRIM34Q9BYJ4 488 aa18.16■□□□□ 0.5
RXRA-203ENST00000484822 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
RXRA-203ENST00000484822 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
RXRA-203ENST00000484822 NAT10Q9H0A0 1025 aaKnown RBP18.15■□□□□ 0.5
RXRA-203ENST00000484822 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
RXRA-203ENST00000484822 GNAI1P63096 354 aa18.15■□□□□ 0.5
RXRA-203ENST00000484822 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
RXRA-203ENST00000484822 FANCAO15360 1455 aa18.14■□□□□ 0.5
RXRA-203ENST00000484822 MTHFSP49914 203 aa18.14■□□□□ 0.49
RXRA-203ENST00000484822 DENND4BO75064 1496 aaPredicted RBP18.14■□□□□ 0.49
RXRA-203ENST00000484822 CDR1P51861 262 aa18.14■□□□□ 0.49
RXRA-203ENST00000484822 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.14■□□□□ 0.49
RXRA-203ENST00000484822 MCM4P33991 863 aa18.13■□□□□ 0.49
RXRA-203ENST00000484822 LETM1O95202 739 aaPredicted RBP18.13■□□□□ 0.49
RXRA-203ENST00000484822 SMC2O95347 1197 aa18.13■□□□□ 0.49
RXRA-203ENST00000484822 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
RXRA-203ENST00000484822 LEKR1Q6ZMV7 388 aa18.13■□□□□ 0.49
RXRA-203ENST00000484822 RDXP35241 583 aaKnown RBP18.12■□□□□ 0.49
RXRA-203ENST00000484822 ESCO1Q5FWF5 840 aa18.12■□□□□ 0.49
RXRA-203ENST00000484822 CTDP1Q9Y5B0 961 aaPredicted RBP18.12■□□□□ 0.49
RXRA-203ENST00000484822 CCDC47Q96A33 483 aaKnown RBP18.12■□□□□ 0.49
RXRA-203ENST00000484822 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
RXRA-203ENST00000484822 CCDC112Q8NEF3 446 aa18.12■□□□□ 0.49
RXRA-203ENST00000484822 TRDNQ13061 729 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 RABEP1Q15276 862 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 RAPGEF6Q8TEU7 1601 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 HMOX1P09601 288 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 CAGE1Q8TC20 777 aa18.11■□□□□ 0.49
RXRA-203ENST00000484822 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
RXRA-203ENST00000484822 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
RXRA-203ENST00000484822 ATAD2Q6PL18 1390 aa18.1■□□□□ 0.49
RXRA-203ENST00000484822 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
RXRA-203ENST00000484822 ERCC4Q92889 916 aaPredicted RBP18.1■□□□□ 0.49
RXRA-203ENST00000484822 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
RXRA-203ENST00000484822 SLC12A5Q9H2X9 1139 aa18.1■□□□□ 0.49
RXRA-203ENST00000484822 NFXL1Q6ZNB6 911 aa18.1■□□□□ 0.49
RXRA-203ENST00000484822 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
RXRA-203ENST00000484822 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
RXRA-203ENST00000484822 NLRP2Q9NX02 1062 aa18.09■□□□□ 0.49
RXRA-203ENST00000484822 KINO60870 393 aaKnown RBP18.08■□□□□ 0.49
RXRA-203ENST00000484822 BCAR3O75815 825 aa18.08■□□□□ 0.49
RXRA-203ENST00000484822 AXDND1Q5T1B0 1012 aaPredicted RBP18.08■□□□□ 0.49
RXRA-203ENST00000484822 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.49
RXRA-203ENST00000484822 GPATCH8Q9UKJ3 1502 aaKnown RBP18.08■□□□□ 0.49
RXRA-203ENST00000484822 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.49
RXRA-203ENST00000484822 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
RXRA-203ENST00000484822 ERC2O15083 957 aa18.08■□□□□ 0.48
RXRA-203ENST00000484822 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.48
RXRA-203ENST00000484822 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.48
RXRA-203ENST00000484822 CABP1Q9NZU7 370 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms