RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 TTC21BQ7Z4L5 1316 aa13.64□□□□□ -0.23
HDAC6-226ENST00000483656 NME9Q86XW9 330 aa13.63□□□□□ -0.23
HDAC6-226ENST00000483656 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
HDAC6-226ENST00000483656 TNNT2P45379 298 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-226ENST00000483656 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
HDAC6-226ENST00000483656 LRRC7Q96NW7 1537 aa13.62□□□□□ -0.23
HDAC6-226ENST00000483656 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
HDAC6-226ENST00000483656 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
HDAC6-226ENST00000483656 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
HDAC6-226ENST00000483656 DCCP43146 1447 aa13.6□□□□□ -0.23
HDAC6-226ENST00000483656 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
HDAC6-226ENST00000483656 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
HDAC6-226ENST00000483656 MST1RQ04912 1400 aa13.59□□□□□ -0.23
HDAC6-226ENST00000483656 MTHFSP49914 203 aa13.58□□□□□ -0.24
HDAC6-226ENST00000483656 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
HDAC6-226ENST00000483656 TTC21AQ8NDW8 1320 aa13.58□□□□□ -0.24
HDAC6-226ENST00000483656 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
HDAC6-226ENST00000483656 OVOS2A0A0J9YW53 1432 aa13.57□□□□□ -0.24
HDAC6-226ENST00000483656 OVOS2Q6IE36 1432 aa13.57□□□□□ -0.24
HDAC6-226ENST00000483656 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-226ENST00000483656 FBLN1P23142 703 aa13.57□□□□□ -0.24
HDAC6-226ENST00000483656 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDAC6-226ENST00000483656 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
HDAC6-226ENST00000483656 ATF3P18847 181 aa13.56□□□□□ -0.24
HDAC6-226ENST00000483656 COG3Q96JB2 828 aa13.56□□□□□ -0.24
HDAC6-226ENST00000483656 INSRP06213 1382 aa13.56□□□□□ -0.24
HDAC6-226ENST00000483656 MSH6P52701 1360 aa13.56□□□□□ -0.24
HDAC6-226ENST00000483656 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
HDAC6-226ENST00000483656 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
HDAC6-226ENST00000483656 ADAMTS8Q9UP79 889 aa13.55□□□□□ -0.24
HDAC6-226ENST00000483656 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
HDAC6-226ENST00000483656 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-226ENST00000483656 PIK3C2AO00443 1686 aa13.54□□□□□ -0.24
HDAC6-226ENST00000483656 BLMP54132 1417 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-226ENST00000483656 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
HDAC6-226ENST00000483656 FOXO3O43524 673 aa13.53□□□□□ -0.24
HDAC6-226ENST00000483656 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
HDAC6-226ENST00000483656 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
HDAC6-226ENST00000483656 PSME1Q06323 249 aa13.52□□□□□ -0.25
HDAC6-226ENST00000483656 KIF1AQ12756 1690 aa13.52□□□□□ -0.25
HDAC6-226ENST00000483656 MARF1Q9Y4F3 1742 aaKnown RBP13.52□□□□□ -0.25
HDAC6-226ENST00000483656 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
HDAC6-226ENST00000483656 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
HDAC6-226ENST00000483656 WDR43Q15061 677 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDAC6-226ENST00000483656 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
HDAC6-226ENST00000483656 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
HDAC6-226ENST00000483656 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
HDAC6-226ENST00000483656 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
HDAC6-226ENST00000483656 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-226ENST00000483656 KRT28Q7Z3Y7 464 aa13.5□□□□□ -0.25
HDAC6-226ENST00000483656 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
HDAC6-226ENST00000483656 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-226ENST00000483656 PAK3O75914 559 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-226ENST00000483656 NLRP6P59044 892 aa13.49□□□□□ -0.25
HDAC6-226ENST00000483656 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
HDAC6-226ENST00000483656 NUTM2GQ5VZR2 741 aa13.49□□□□□ -0.25
HDAC6-226ENST00000483656 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
HDAC6-226ENST00000483656 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
HDAC6-226ENST00000483656 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
HDAC6-226ENST00000483656 SLAIN2Q9P270 581 aa13.48□□□□□ -0.25
HDAC6-226ENST00000483656 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-226ENST00000483656 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-226ENST00000483656 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
HDAC6-226ENST00000483656 PEAK1Q9H792 1746 aa13.46□□□□□ -0.25
HDAC6-226ENST00000483656 MAP3K19Q56UN5 1328 aa13.45□□□□□ -0.26
HDAC6-226ENST00000483656 PXDNQ92626 1479 aa13.45□□□□□ -0.26
HDAC6-226ENST00000483656 IL13P35225 146 aa13.45□□□□□ -0.26
HDAC6-226ENST00000483656 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
HDAC6-226ENST00000483656 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
HDAC6-226ENST00000483656 SOX12O15370 315 aa13.44□□□□□ -0.26
HDAC6-226ENST00000483656 ALS2Q96Q42 1657 aa13.44□□□□□ -0.26
HDAC6-226ENST00000483656 NPHP3Q7Z494 1330 aa13.43□□□□□ -0.26
HDAC6-226ENST00000483656 U2AF1L5P0DN76 240 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-226ENST00000483656 U2AF1Q01081 240 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC6-226ENST00000483656 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
HDAC6-226ENST00000483656 SLIT3O75094 1523 aa13.43□□□□□ -0.26
HDAC6-226ENST00000483656 NFAT5O94916 1531 aa13.43□□□□□ -0.26
HDAC6-226ENST00000483656 USP19O94966 1318 aa13.42□□□□□ -0.26
HDAC6-226ENST00000483656 U2SURPO15042 1029 aaKnown RBP13.42□□□□□ -0.26
HDAC6-226ENST00000483656 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
HDAC6-226ENST00000483656 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-226ENST00000483656 APAF1O14727 1248 aa13.41□□□□□ -0.26
HDAC6-226ENST00000483656 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
HDAC6-226ENST00000483656 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
HDAC6-226ENST00000483656 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
HDAC6-226ENST00000483656 SOS2Q07890 1332 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-226ENST00000483656 SPATA31A3Q5VYP0 1347 aa13.4□□□□□ -0.26
HDAC6-226ENST00000483656 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
HDAC6-226ENST00000483656 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
HDAC6-226ENST00000483656 MED1Q15648 1581 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-226ENST00000483656 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 GCP02774 474 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 HOXC9P31274 260 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 FLT4P35916 1363 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 KIF24Q5T7B8 1368 aa13.39□□□□□ -0.27
HDAC6-226ENST00000483656 AMPHP49418 695 aa13.38□□□□□ -0.27
HDAC6-226ENST00000483656 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
HDAC6-226ENST00000483656 FCHSD2O94868 740 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms