RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PXDNQ92626 1479 aa21.08■□□□□ 0.96
CCM2-215ENST00000482714 PER1O15534 1290 aaPredicted RBP21.07■□□□□ 0.96
CCM2-215ENST00000482714 PAK3O75914 559 aaPredicted RBP21.07■□□□□ 0.96
CCM2-215ENST00000482714 KNSTRNQ9Y448 316 aa21.07■□□□□ 0.96
CCM2-215ENST00000482714 XPCQ01831 940 aaPredicted RBP21.06■□□□□ 0.96
CCM2-215ENST00000482714 ARHGEF10O15013 1369 aa21.05■□□□□ 0.96
CCM2-215ENST00000482714 ABTB2Q8N961 1025 aa21.05■□□□□ 0.96
CCM2-215ENST00000482714 AKAP12Q02952 1782 aa21.04■□□□□ 0.96
CCM2-215ENST00000482714 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
CCM2-215ENST00000482714 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
CCM2-215ENST00000482714 MYOM1P52179 1685 aa21.04■□□□□ 0.96
CCM2-215ENST00000482714 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
CCM2-215ENST00000482714 FYB1O15117 783 aa21.01■□□□□ 0.95
CCM2-215ENST00000482714 TNS3Q68CZ2 1445 aa21.01■□□□□ 0.95
CCM2-215ENST00000482714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCM2-215ENST00000482714 USP31Q70CQ4 1352 aa21.01■□□□□ 0.95
CCM2-215ENST00000482714 PHLPP1O60346 1717 aa21.01■□□□□ 0.95
CCM2-215ENST00000482714 MON2Q7Z3U7 1717 aa21.01■□□□□ 0.95
CCM2-215ENST00000482714 NLRP6P59044 892 aa21.01■□□□□ 0.95
CCM2-215ENST00000482714 JCADQ9P266 1359 aa21■□□□□ 0.95
CCM2-215ENST00000482714 NSD3Q9BZ95 1437 aa21■□□□□ 0.95
CCM2-215ENST00000482714 LMOD2Q6P5Q4 547 aa20.99■□□□□ 0.95
CCM2-215ENST00000482714 COL16A1Q07092 1604 aaPredicted RBP20.98■□□□□ 0.95
CCM2-215ENST00000482714 NPC1L1Q9UHC9 1359 aa20.98■□□□□ 0.95
CCM2-215ENST00000482714 NSD2O96028 1365 aa20.98■□□□□ 0.95
CCM2-215ENST00000482714 TRPM3Q9HCF6 1732 aaPredicted RBP20.98■□□□□ 0.95
CCM2-215ENST00000482714 AMER1Q5JTC6 1135 aaPredicted RBP20.97■□□□□ 0.95
CCM2-215ENST00000482714 NME9Q86XW9 330 aa20.96■□□□□ 0.95
CCM2-215ENST00000482714 KCNH5Q8NCM2 988 aa20.96■□□□□ 0.95
CCM2-215ENST00000482714 COG3Q96JB2 828 aa20.96■□□□□ 0.95
CCM2-215ENST00000482714 SPATA31A6Q5VVP1 1343 aa20.95■□□□□ 0.94
CCM2-215ENST00000482714 PNPLA6Q8IY17 1366 aa20.95■□□□□ 0.94
CCM2-215ENST00000482714 ALS2Q96Q42 1657 aa20.93■□□□□ 0.94
CCM2-215ENST00000482714 NRKQ7Z2Y5 1582 aa20.93■□□□□ 0.94
CCM2-215ENST00000482714 USP19O94966 1318 aa20.92■□□□□ 0.94
CCM2-215ENST00000482714 GGNBP2Q9H3C7 697 aa20.92■□□□□ 0.94
CCM2-215ENST00000482714 GCP02774 474 aa20.91■□□□□ 0.94
CCM2-215ENST00000482714 NUTM2GQ5VZR2 741 aa20.9■□□□□ 0.94
CCM2-215ENST00000482714 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
CCM2-215ENST00000482714 OVOS2A0A0J9YW53 1432 aa20.88■□□□□ 0.93
CCM2-215ENST00000482714 OVOS2Q6IE36 1432 aa20.88■□□□□ 0.93
CCM2-215ENST00000482714 COL22A1Q8NFW1 1626 aaPredicted RBP20.88■□□□□ 0.93
CCM2-215ENST00000482714 HAP1P54257 671 aaPredicted RBP20.88■□□□□ 0.93
CCM2-215ENST00000482714 ILDR2Q71H61 639 aa20.88■□□□□ 0.93
CCM2-215ENST00000482714 MORC1Q86VD1 984 aa20.88■□□□□ 0.93
CCM2-215ENST00000482714 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
CCM2-215ENST00000482714 SHPRHQ149N8 1683 aa20.87■□□□□ 0.93
CCM2-215ENST00000482714 PIK3C2AO00443 1686 aa20.86■□□□□ 0.93
CCM2-215ENST00000482714 CABLES1Q8TDN4 633 aa20.86■□□□□ 0.93
CCM2-215ENST00000482714 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
CCM2-215ENST00000482714 USP54Q70EL1 1684 aa20.84■□□□□ 0.93
CCM2-215ENST00000482714 RALBP1Q15311 655 aa20.84■□□□□ 0.93
CCM2-215ENST00000482714 AATKQ6ZMQ8 1374 aa20.84■□□□□ 0.93
CCM2-215ENST00000482714 SLIT3O75094 1523 aa20.84■□□□□ 0.93
CCM2-215ENST00000482714 CPDO75976 1380 aa20.83■□□□□ 0.93
CCM2-215ENST00000482714 ARHGEF25Q86VW2 580 aa20.82■□□□□ 0.92
CCM2-215ENST00000482714 KIF20BQ96Q89 1820 aa20.81■□□□□ 0.92
CCM2-215ENST00000482714 NUTM2BA6NNL0 878 aaPredicted RBP20.81■□□□□ 0.92
CCM2-215ENST00000482714 NUTM2EB1AL46 878 aaPredicted RBP20.81■□□□□ 0.92
CCM2-215ENST00000482714 NUTM2AQ8IVF1 878 aaPredicted RBP20.81■□□□□ 0.92
CCM2-215ENST00000482714 KIF24Q5T7B8 1368 aa20.8■□□□□ 0.92
CCM2-215ENST00000482714 ZC3H6P61129 1189 aaKnown RBP20.79■□□□□ 0.92
CCM2-215ENST00000482714 PRDM11Q9NQV5 511 aa20.78■□□□□ 0.92
CCM2-215ENST00000482714 PLEKHG5O94827 1062 aa20.77■□□□□ 0.92
CCM2-215ENST00000482714 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
CCM2-215ENST00000482714 PARD3Q8TEW0 1356 aa20.77■□□□□ 0.92
CCM2-215ENST00000482714 FAM83GA6ND36 823 aa20.76■□□□□ 0.91
CCM2-215ENST00000482714 ANP32CO43423 234 aa20.76■□□□□ 0.91
CCM2-215ENST00000482714 ADAMTS2O95450 1211 aa20.76■□□□□ 0.91
CCM2-215ENST00000482714 PRKRIP1Q9H875 184 aaPredicted RBP20.76■□□□□ 0.91
CCM2-215ENST00000482714 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
CCM2-215ENST00000482714 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
CCM2-215ENST00000482714 SOX12O15370 315 aa20.75■□□□□ 0.91
CCM2-215ENST00000482714 IP6K1Q92551 441 aa20.75■□□□□ 0.91
CCM2-215ENST00000482714 KIAA0232Q92628 1395 aa20.75■□□□□ 0.91
CCM2-215ENST00000482714 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
CCM2-215ENST00000482714 CRYBG1Q9Y4K1 1723 aa20.75■□□□□ 0.91
CCM2-215ENST00000482714 FNBP4Q8N3X1 1017 aaPredicted RBP20.75■□□□□ 0.91
CCM2-215ENST00000482714 MAP3K19Q56UN5 1328 aa20.74■□□□□ 0.91
CCM2-215ENST00000482714 NFAT5O94916 1531 aa20.74■□□□□ 0.91
CCM2-215ENST00000482714 TNNT2P45379 298 aaPredicted RBP20.74■□□□□ 0.91
CCM2-215ENST00000482714 AMPHP49418 695 aa20.74■□□□□ 0.91
CCM2-215ENST00000482714 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
CCM2-215ENST00000482714 NGLY1Q96IV0 654 aa20.74■□□□□ 0.91
CCM2-215ENST00000482714 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
CCM2-215ENST00000482714 PHRF1Q9P1Y6 1649 aaKnown RBP20.73■□□□□ 0.91
CCM2-215ENST00000482714 FBLN1P23142 703 aa20.73■□□□□ 0.91
CCM2-215ENST00000482714 PPP2R1AP30153 589 aa20.72■□□□□ 0.91
CCM2-215ENST00000482714 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
CCM2-215ENST00000482714 DIEXFQ68CQ4 756 aaKnown RBP20.72■□□□□ 0.91
CCM2-215ENST00000482714 RTL1A6NKG5 1358 aa20.71■□□□□ 0.91
CCM2-215ENST00000482714 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
CCM2-215ENST00000482714 MTHFSP49914 203 aa20.7■□□□□ 0.9
CCM2-215ENST00000482714 ABCC6O95255 1503 aa20.7■□□□□ 0.9
CCM2-215ENST00000482714 MYBBP1AQ9BQG0 1328 aaKnown RBP20.69■□□□□ 0.9
CCM2-215ENST00000482714 ABCA3Q99758 1704 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 HOXC9P31274 260 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 LRP6O75581 1613 aa20.69■□□□□ 0.9
CCM2-215ENST00000482714 INSRP06213 1382 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms