RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 STRCQ7RTU9 1775 aa13.83□□□□□ -0.2
APTX-225ENST00000482687 ACEP12821 1306 aa13.83□□□□□ -0.2
APTX-225ENST00000482687 PROSER2Q86WR7 435 aaPredicted RBP13.82□□□□□ -0.2
APTX-225ENST00000482687 NME9Q86XW9 330 aa13.82□□□□□ -0.2
APTX-225ENST00000482687 NWD1Q149M9 1564 aa13.82□□□□□ -0.2
APTX-225ENST00000482687 NSD2O96028 1365 aa13.82□□□□□ -0.2
APTX-225ENST00000482687 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
APTX-225ENST00000482687 FBLN1P23142 703 aa13.8□□□□□ -0.2
APTX-225ENST00000482687 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
APTX-225ENST00000482687 EDC4Q6P2E9 1401 aaKnown RBP13.8□□□□□ -0.2
APTX-225ENST00000482687 MTHFSP49914 203 aa13.8□□□□□ -0.2
APTX-225ENST00000482687 PLEKHG3A1L390 1219 aa13.79□□□□□ -0.2
APTX-225ENST00000482687 WDR43Q15061 677 aaKnown RBP eCLIP13.79□□□□□ -0.2
APTX-225ENST00000482687 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
APTX-225ENST00000482687 NGDNQ8NEJ9 315 aaKnown RBP13.78□□□□□ -0.2
APTX-225ENST00000482687 NRKQ7Z2Y5 1582 aa13.78□□□□□ -0.2
APTX-225ENST00000482687 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
APTX-225ENST00000482687 ADGRL3Q9HAR2 1447 aa13.77□□□□□ -0.2
APTX-225ENST00000482687 SHPRHQ149N8 1683 aa13.77□□□□□ -0.21
APTX-225ENST00000482687 MAP2P11137 1827 aaKnown RBP13.77□□□□□ -0.21
APTX-225ENST00000482687 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
APTX-225ENST00000482687 TTC21BQ7Z4L5 1316 aa13.76□□□□□ -0.21
APTX-225ENST00000482687 USP6P35125 1406 aa13.76□□□□□ -0.21
APTX-225ENST00000482687 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
APTX-225ENST00000482687 CCDC146Q8IYE0 955 aa13.76□□□□□ -0.21
APTX-225ENST00000482687 POLR3AO14802 1390 aaPredicted RBP13.75□□□□□ -0.21
APTX-225ENST00000482687 BLMP54132 1417 aaPredicted RBP13.74□□□□□ -0.21
APTX-225ENST00000482687 PPM1GO15355 546 aaPredicted RBP13.74□□□□□ -0.21
APTX-225ENST00000482687 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
APTX-225ENST00000482687 COG3Q96JB2 828 aa13.74□□□□□ -0.21
APTX-225ENST00000482687 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
APTX-225ENST00000482687 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
APTX-225ENST00000482687 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
APTX-225ENST00000482687 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
APTX-225ENST00000482687 SOX12O15370 315 aa13.72□□□□□ -0.21
APTX-225ENST00000482687 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
APTX-225ENST00000482687 ORAI2Q96SN7 254 aa13.72□□□□□ -0.21
APTX-225ENST00000482687 XIRP1Q702N8 1843 aaKnown RBP13.72□□□□□ -0.21
APTX-225ENST00000482687 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
APTX-225ENST00000482687 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
APTX-225ENST00000482687 EMILIN1Q9Y6C2 1016 aa13.71□□□□□ -0.21
APTX-225ENST00000482687 SSH2Q76I76 1423 aa13.71□□□□□ -0.22
APTX-225ENST00000482687 RRS1Q15050 365 aaKnown RBP13.7□□□□□ -0.22
APTX-225ENST00000482687 ZNF335Q9H4Z2 1342 aaPredicted RBP13.7□□□□□ -0.22
APTX-225ENST00000482687 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
APTX-225ENST00000482687 XPCQ01831 940 aaPredicted RBP13.7□□□□□ -0.22
APTX-225ENST00000482687 C19orf44Q9H6X5 657 aa13.7□□□□□ -0.22
APTX-225ENST00000482687 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
APTX-225ENST00000482687 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
APTX-225ENST00000482687 PLEKHG5O94827 1062 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
APTX-225ENST00000482687 ATF3P18847 181 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.222e-8■■■■■ 37
APTX-225ENST00000482687 PSME1Q06323 249 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 RTL5Q5HYW3 569 aaPredicted RBP13.67□□□□□ -0.22
APTX-225ENST00000482687 OVOS2A0A0J9YW53 1432 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 OVOS2Q6IE36 1432 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 TTC21AQ8NDW8 1320 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 APAF1O14727 1248 aa13.67□□□□□ -0.22
APTX-225ENST00000482687 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
APTX-225ENST00000482687 INSRP06213 1382 aa13.66□□□□□ -0.22
APTX-225ENST00000482687 FOXO3O43524 673 aa13.66□□□□□ -0.22
APTX-225ENST00000482687 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
APTX-225ENST00000482687 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
APTX-225ENST00000482687 NLRP6P59044 892 aa13.65□□□□□ -0.22
APTX-225ENST00000482687 ABTB2Q8N961 1025 aa13.65□□□□□ -0.22
APTX-225ENST00000482687 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
APTX-225ENST00000482687 RRP7AQ9Y3A4 280 aaKnown RBP13.65□□□□□ -0.22
APTX-225ENST00000482687 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
APTX-225ENST00000482687 MST1RQ04912 1400 aa13.64□□□□□ -0.23
APTX-225ENST00000482687 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
APTX-225ENST00000482687 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
APTX-225ENST00000482687 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
APTX-225ENST00000482687 NEUROD2Q15784 382 aa13.63□□□□□ -0.23
APTX-225ENST00000482687 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
APTX-225ENST00000482687 MSH6P52701 1360 aa13.63□□□□□ -0.23
APTX-225ENST00000482687 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
APTX-225ENST00000482687 NBR1Q14596 966 aa13.63□□□□□ -0.23
APTX-225ENST00000482687 LMOD2Q6P5Q4 547 aa13.62□□□□□ -0.23
APTX-225ENST00000482687 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
APTX-225ENST00000482687 USP31Q70CQ4 1352 aa13.62□□□□□ -0.23
APTX-225ENST00000482687 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
APTX-225ENST00000482687 SMG6Q86US8 1419 aaKnown RBP13.62□□□□□ -0.23
APTX-225ENST00000482687 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
APTX-225ENST00000482687 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
APTX-225ENST00000482687 HMOX1P09601 288 aa13.61□□□□□ -0.23
APTX-225ENST00000482687 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
APTX-225ENST00000482687 NCOA3Q9Y6Q9 1424 aa13.6□□□□□ -0.23
APTX-225ENST00000482687 TRPM3Q9HCF6 1732 aaPredicted RBP13.6□□□□□ -0.23
APTX-225ENST00000482687 IL13P35225 146 aa13.6□□□□□ -0.23
APTX-225ENST00000482687 TCP11L2Q8N4U5 519 aa13.6□□□□□ -0.23
APTX-225ENST00000482687 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
APTX-225ENST00000482687 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
APTX-225ENST00000482687 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
APTX-225ENST00000482687 IRX6P78412 446 aaPredicted RBP13.59□□□□□ -0.23
APTX-225ENST00000482687 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
APTX-225ENST00000482687 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
APTX-225ENST00000482687 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
APTX-225ENST00000482687 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
APTX-225ENST00000482687 DCCP43146 1447 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms