RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 ATRNO75882 1429 aa15.92■□□□□ 0.14
SORT1-204ENST00000482236 ATAD2Q6PL18 1390 aa15.91■□□□□ 0.14
SORT1-204ENST00000482236 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
SORT1-204ENST00000482236 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
SORT1-204ENST00000482236 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
SORT1-204ENST00000482236 GJD4Q96KN9 370 aaPredicted RBP15.9■□□□□ 0.14
SORT1-204ENST00000482236 TRPM3Q9HCF6 1732 aaPredicted RBP15.88■□□□□ 0.13
SORT1-204ENST00000482236 NBPF8Q3BBV2 869 aa15.88■□□□□ 0.13
SORT1-204ENST00000482236 BTG4Q9NY30 223 aa15.88■□□□□ 0.13
SORT1-204ENST00000482236 BCL9LQ86UU0 1499 aa15.88■□□□□ 0.13
SORT1-204ENST00000482236 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
SORT1-204ENST00000482236 TOPAZ1Q8N9V7 1692 aa15.87■□□□□ 0.13
SORT1-204ENST00000482236 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
SORT1-204ENST00000482236 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
SORT1-204ENST00000482236 SLIT2O94813 1529 aa15.87■□□□□ 0.13
SORT1-204ENST00000482236 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
SORT1-204ENST00000482236 RALGAPBQ86X10 1494 aa15.86■□□□□ 0.13
SORT1-204ENST00000482236 PLEKHG3A1L390 1219 aa15.86■□□□□ 0.13
SORT1-204ENST00000482236 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
SORT1-204ENST00000482236 ZC3H6P61129 1189 aaKnown RBP15.85■□□□□ 0.13
SORT1-204ENST00000482236 STRN4Q9NRL3 753 aa15.85■□□□□ 0.13
SORT1-204ENST00000482236 ALS2Q96Q42 1657 aa15.85■□□□□ 0.13
SORT1-204ENST00000482236 FAM83GA6ND36 823 aa15.84■□□□□ 0.13
SORT1-204ENST00000482236 EVA1CP58658 441 aa15.84■□□□□ 0.13
SORT1-204ENST00000482236 VPS72Q15906 364 aa15.84■□□□□ 0.13
SORT1-204ENST00000482236 NLRP13Q86W25 1043 aa15.84■□□□□ 0.13
SORT1-204ENST00000482236 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
SORT1-204ENST00000482236 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
SORT1-204ENST00000482236 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
SORT1-204ENST00000482236 CHRNA2Q15822 529 aa15.83■□□□□ 0.12
SORT1-204ENST00000482236 KIAA0232Q92628 1395 aa15.83■□□□□ 0.12
SORT1-204ENST00000482236 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
SORT1-204ENST00000482236 NWD2Q9ULI1 1742 aa15.82■□□□□ 0.12
SORT1-204ENST00000482236 NLRP6P59044 892 aa15.81■□□□□ 0.12
SORT1-204ENST00000482236 SEPT12Q8IYM1 358 aa15.81■□□□□ 0.12
SORT1-204ENST00000482236 USP6P35125 1406 aa15.8■□□□□ 0.12
SORT1-204ENST00000482236 BRD4O60885 1362 aaPredicted RBP15.8■□□□□ 0.12
SORT1-204ENST00000482236 SOX12O15370 315 aa15.8■□□□□ 0.12
SORT1-204ENST00000482236 FAM98CQ17RN3 349 aaKnown RBP15.8■□□□□ 0.12
SORT1-204ENST00000482236 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
SORT1-204ENST00000482236 HDGFL2Q7Z4V5 671 aaPredicted RBP15.79■□□□□ 0.12
SORT1-204ENST00000482236 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
SORT1-204ENST00000482236 PHRF1Q9P1Y6 1649 aaKnown RBP15.79■□□□□ 0.12
SORT1-204ENST00000482236 GLI3P10071 1580 aa15.79■□□□□ 0.12
SORT1-204ENST00000482236 KTN1Q86UP2 1357 aaKnown RBP15.78■□□□□ 0.12
SORT1-204ENST00000482236 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
SORT1-204ENST00000482236 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
SORT1-204ENST00000482236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.76■□□□□ 0.117e-7■□□□□ 9.5
SORT1-204ENST00000482236 SBNO2Q9Y2G9 1366 aa15.75■□□□□ 0.11
SORT1-204ENST00000482236 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
SORT1-204ENST00000482236 GCP02774 474 aa15.75■□□□□ 0.11
SORT1-204ENST00000482236 TERF2IPQ9NYB0 399 aa15.75■□□□□ 0.11
SORT1-204ENST00000482236 USP19O94966 1318 aa15.74■□□□□ 0.11
SORT1-204ENST00000482236 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
SORT1-204ENST00000482236 CSB-PGBD3P0DP91 1061 aa15.74■□□□□ 0.11
SORT1-204ENST00000482236 NRAPQ86VF7 1730 aa15.74■□□□□ 0.11
SORT1-204ENST00000482236 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
SORT1-204ENST00000482236 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 TTC21BQ7Z4L5 1316 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 TTC21AQ8NDW8 1320 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 CCDC125Q86Z20 511 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 KCNH5Q8NCM2 988 aa15.73■□□□□ 0.11
SORT1-204ENST00000482236 USP47Q96K76 1375 aa15.72■□□□□ 0.11
SORT1-204ENST00000482236 SSH2Q76I76 1423 aa15.71■□□□□ 0.11
SORT1-204ENST00000482236 TMF1P82094 1093 aa15.71■□□□□ 0.11
SORT1-204ENST00000482236 CPDO75976 1380 aa15.71■□□□□ 0.11
SORT1-204ENST00000482236 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
SORT1-204ENST00000482236 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
SORT1-204ENST00000482236 SPATA31A1Q5TZJ5 1347 aa15.69■□□□□ 0.1
SORT1-204ENST00000482236 BLMP54132 1417 aaPredicted RBP15.69■□□□□ 0.1
SORT1-204ENST00000482236 LARP1Q6PKG0 1096 aaKnown RBP15.69■□□□□ 0.1
SORT1-204ENST00000482236 TOM1L2Q6ZVM7 507 aa15.69■□□□□ 0.1
SORT1-204ENST00000482236 PIK3C2AO00443 1686 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 POLR3GLQ9BT43 218 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 SLC12A5Q9H2X9 1139 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 TIMELESSQ9UNS1 1208 aa15.68■□□□□ 0.1
SORT1-204ENST00000482236 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
SORT1-204ENST00000482236 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
SORT1-204ENST00000482236 BAG6P46379 1132 aa15.67■□□□□ 0.1
SORT1-204ENST00000482236 CPSF1Q10570 1443 aaKnown RBP15.67■□□□□ 0.1
SORT1-204ENST00000482236 FAM182BQ5T319 152 aa15.66■□□□□ 0.1
SORT1-204ENST00000482236 NME9Q86XW9 330 aa15.66■□□□□ 0.1
SORT1-204ENST00000482236 SLIT3O75094 1523 aa15.66■□□□□ 0.1
SORT1-204ENST00000482236 EDC4Q6P2E9 1401 aaKnown RBP15.66■□□□□ 0.1
SORT1-204ENST00000482236 BRWD3Q6RI45 1802 aa15.66■□□□□ 0.1
SORT1-204ENST00000482236 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
SORT1-204ENST00000482236 AATKQ6ZMQ8 1374 aa15.65■□□□□ 0.1
SORT1-204ENST00000482236 ONECUT3O60422 494 aaPredicted RBP15.65■□□□□ 0.1
SORT1-204ENST00000482236 COL5A2P05997 1499 aaPredicted RBP15.65■□□□□ 0.1
SORT1-204ENST00000482236 CAMTA1Q9Y6Y1 1673 aa15.64■□□□□ 0.09
SORT1-204ENST00000482236 CRB1P82279 1406 aa15.64■□□□□ 0.09
SORT1-204ENST00000482236 MON2Q7Z3U7 1717 aa15.63■□□□□ 0.09
SORT1-204ENST00000482236 DEFB132Q7Z7B7 95 aa15.63■□□□□ 0.09
SORT1-204ENST00000482236 COG3Q96JB2 828 aa15.63■□□□□ 0.09
SORT1-204ENST00000482236 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms