RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ACEP12821 1306 aa26.76■■□□□ 1.87
CLK1-211ENST00000481641 CENPJQ9HC77 1338 aaPredicted RBP26.76■■□□□ 1.87
CLK1-211ENST00000481641 BTG4Q9NY30 223 aa26.75■■□□□ 1.87
CLK1-211ENST00000481641 CCDC61Q9Y6R9 512 aa26.75■■□□□ 1.87
CLK1-211ENST00000481641 TOPAZ1Q8N9V7 1692 aa26.75■■□□□ 1.87
CLK1-211ENST00000481641 CRYBG1Q9Y4K1 1723 aa26.74■■□□□ 1.87
CLK1-211ENST00000481641 NUTM2GQ5VZR2 741 aa26.74■■□□□ 1.87
CLK1-211ENST00000481641 SEPT12Q8IYM1 358 aa26.74■■□□□ 1.87
CLK1-211ENST00000481641 BRWD3Q6RI45 1802 aa26.74■■□□□ 1.87
CLK1-211ENST00000481641 NBPF8Q3BBV2 869 aa26.73■■□□□ 1.87
CLK1-211ENST00000481641 CABP2Q9NPB3 220 aa26.73■■□□□ 1.87
CLK1-211ENST00000481641 POLR3AO14802 1390 aaPredicted RBP26.72■■□□□ 1.87
CLK1-211ENST00000481641 PLEKHG3A1L390 1219 aa26.72■■□□□ 1.87
CLK1-211ENST00000481641 SRPK2P78362 688 aaKnown RBP26.72■■□□□ 1.87
CLK1-211ENST00000481641 NRAPQ86VF7 1730 aa26.71■■□□□ 1.87
CLK1-211ENST00000481641 COL14A1Q05707 1796 aaKnown RBP26.7■■□□□ 1.86
CLK1-211ENST00000481641 QRICH2Q9H0J4 1663 aa26.7■■□□□ 1.86
CLK1-211ENST00000481641 ONECUT3O60422 494 aaPredicted RBP26.68■■□□□ 1.86
CLK1-211ENST00000481641 PRDM11Q9NQV5 511 aa26.68■■□□□ 1.86
CLK1-211ENST00000481641 TRPM1Q7Z4N2 1603 aa26.68■■□□□ 1.86
CLK1-211ENST00000481641 PPIP5K1Q6PFW1 1433 aa26.66■■□□□ 1.86
CLK1-211ENST00000481641 CHRNA2Q15822 529 aa26.66■■□□□ 1.86
CLK1-211ENST00000481641 FAM98CQ17RN3 349 aaKnown RBP26.66■■□□□ 1.86
CLK1-211ENST00000481641 A0A0G2JS52 829 aa26.65■■□□□ 1.86
CLK1-211ENST00000481641 ZC3H6P61129 1189 aaKnown RBP26.65■■□□□ 1.86
CLK1-211ENST00000481641 MYT1Q01538 1121 aa26.65■■□□□ 1.86
CLK1-211ENST00000481641 KIAA0232Q92628 1395 aa26.65■■□□□ 1.86
CLK1-211ENST00000481641 PHRF1Q9P1Y6 1649 aaKnown RBP26.65■■□□□ 1.86
CLK1-211ENST00000481641 ROCK2O75116 1388 aaKnown RBP26.63■■□□□ 1.85
CLK1-211ENST00000481641 CCDC125Q86Z20 511 aa26.63■■□□□ 1.85
CLK1-211ENST00000481641 ABTB2Q8N961 1025 aa26.63■■□□□ 1.85
CLK1-211ENST00000481641 KRT27Q7Z3Y8 459 aa26.62■■□□□ 1.85
CLK1-211ENST00000481641 CABP1Q9NZU7 370 aa26.62■■□□□ 1.85
CLK1-211ENST00000481641 SPATA31A5Q5VU36 1347 aa26.61■■□□□ 1.85
CLK1-211ENST00000481641 SPATA31A7Q8IWB4 1347 aa26.61■■□□□ 1.85
CLK1-211ENST00000481641 STRN4Q9NRL3 753 aa26.58■■□□□ 1.85
CLK1-211ENST00000481641 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
CLK1-211ENST00000481641 DEFB132Q7Z7B7 95 aa26.56■■□□□ 1.84
CLK1-211ENST00000481641 EVC2Q86UK5 1308 aa26.56■■□□□ 1.84
CLK1-211ENST00000481641 NRKQ7Z2Y5 1582 aa26.55■■□□□ 1.84
CLK1-211ENST00000481641 FAM182BQ5T319 152 aa26.54■■□□□ 1.84
CLK1-211ENST00000481641 USP19O94966 1318 aa26.54■■□□□ 1.84
CLK1-211ENST00000481641 NLRP13Q86W25 1043 aa26.53■■□□□ 1.84
CLK1-211ENST00000481641 USP6P35125 1406 aa26.52■■□□□ 1.84
CLK1-211ENST00000481641 SPATA31A1Q5TZJ5 1347 aa26.52■■□□□ 1.84
CLK1-211ENST00000481641 GCP02774 474 aa26.51■■□□□ 1.83
CLK1-211ENST00000481641 SF3B2Q13435 895 aaKnown RBP26.51■■□□□ 1.83
CLK1-211ENST00000481641 ZRANB1Q9UGI0 708 aa26.51■■□□□ 1.83
CLK1-211ENST00000481641 EVA1CP58658 441 aa26.5■■□□□ 1.83
CLK1-211ENST00000481641 USP35Q9P2H5 1018 aa26.5■■□□□ 1.83
CLK1-211ENST00000481641 CAMTA1Q9Y6Y1 1673 aa26.5■■□□□ 1.83
CLK1-211ENST00000481641 NLRP6P59044 892 aa26.49■■□□□ 1.83
CLK1-211ENST00000481641 THSD7AQ9UPZ6 1657 aa26.49■■□□□ 1.83
CLK1-211ENST00000481641 CPDO75976 1380 aa26.48■■□□□ 1.83
CLK1-211ENST00000481641 BRD4O60885 1362 aaPredicted RBP26.47■■□□□ 1.83
CLK1-211ENST00000481641 ZBTB7CA1YPR0 619 aa26.47■■□□□ 1.83
CLK1-211ENST00000481641 LARP1Q6PKG0 1096 aaKnown RBP26.47■■□□□ 1.83
CLK1-211ENST00000481641 SSH2Q76I76 1423 aa26.47■■□□□ 1.83
CLK1-211ENST00000481641 CARD11Q9BXL7 1154 aa26.46■■□□□ 1.83
CLK1-211ENST00000481641 TONSLQ96HA7 1378 aa26.46■■□□□ 1.83
CLK1-211ENST00000481641 LMO7Q8WWI1 1683 aa26.45■■□□□ 1.82
CLK1-211ENST00000481641 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
CLK1-211ENST00000481641 PIK3C2AO00443 1686 aa26.43■■□□□ 1.82
CLK1-211ENST00000481641 SRCAPQ6ZRS2 3230 aa26.43■■□□□ 1.82
CLK1-211ENST00000481641 TTC21BQ7Z4L5 1316 aa26.41■■□□□ 1.82
CLK1-211ENST00000481641 AKAP12Q02952 1782 aa26.41■■□□□ 1.82
CLK1-211ENST00000481641 SLIT3O75094 1523 aa26.4■■□□□ 1.82
CLK1-211ENST00000481641 ZNF692Q9BU19 519 aaPredicted RBP26.4■■□□□ 1.82
CLK1-211ENST00000481641 BAG6P46379 1132 aa26.38■■□□□ 1.81
CLK1-211ENST00000481641 BARGINQ6ZT62 677 aa26.38■■□□□ 1.81
CLK1-211ENST00000481641 TCP11L2Q8N4U5 519 aa26.38■■□□□ 1.81
CLK1-211ENST00000481641 COL5A2P05997 1499 aaPredicted RBP26.37■■□□□ 1.81
CLK1-211ENST00000481641 CPSF1Q10570 1443 aaKnown RBP26.37■■□□□ 1.81
CLK1-211ENST00000481641 KTN1Q86UP2 1357 aaKnown RBP26.36■■□□□ 1.81
CLK1-211ENST00000481641 SBNO2Q9Y2G9 1366 aa26.36■■□□□ 1.81
CLK1-211ENST00000481641 SOX12O15370 315 aa26.36■■□□□ 1.81
CLK1-211ENST00000481641 EN1Q05925 392 aaPredicted RBP26.36■■□□□ 1.81
CLK1-211ENST00000481641 AATKQ6ZMQ8 1374 aa26.34■■□□□ 1.81
CLK1-211ENST00000481641 RGPD1P0DJD0 1748 aa26.34■■□□□ 1.81
CLK1-211ENST00000481641 TRIM37O94972 964 aa26.33■■□□□ 1.81
CLK1-211ENST00000481641 AXIN2Q9Y2T1 843 aa26.33■■□□□ 1.81
CLK1-211ENST00000481641 TTC21AQ8NDW8 1320 aa26.33■■□□□ 1.81
CLK1-211ENST00000481641 COL18A1P39060 1754 aa26.33■■□□□ 1.8
CLK1-211ENST00000481641 PDE3BQ13370 1112 aa26.32■■□□□ 1.8
CLK1-211ENST00000481641 FAM196AQ6ZSG2 479 aa26.32■■□□□ 1.8
CLK1-211ENST00000481641 TMC1Q8TDI8 760 aa26.32■■□□□ 1.8
CLK1-211ENST00000481641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.31■■□□□ 1.8
CLK1-211ENST00000481641 TNS1Q9HBL0 1735 aaKnown RBP26.31■■□□□ 1.8
CLK1-211ENST00000481641 CRB1P82279 1406 aa26.31■■□□□ 1.8
CLK1-211ENST00000481641 ARHGEF25Q86VW2 580 aa26.3■■□□□ 1.8
CLK1-211ENST00000481641 SLC12A5Q9H2X9 1139 aa26.3■■□□□ 1.8
CLK1-211ENST00000481641 THRAP3Q9Y2W1 955 aaKnown RBP26.3■■□□□ 1.8
CLK1-211ENST00000481641 MON2Q7Z3U7 1717 aa26.3■■□□□ 1.8
CLK1-211ENST00000481641 CD163L1Q9NR16 1453 aa26.3■■□□□ 1.8
CLK1-211ENST00000481641 PSDA5PKW4 1024 aaPredicted RBP26.28■■□□□ 1.8
CLK1-211ENST00000481641 TOM1L2Q6ZVM7 507 aa26.28■■□□□ 1.8
CLK1-211ENST00000481641 KCNH5Q8NCM2 988 aa26.28■■□□□ 1.8
CLK1-211ENST00000481641 EZH2Q15910 746 aaKnown RBP26.27■■□□□ 1.8
CLK1-211ENST00000481641 RGPD5Q99666 1765 aa26.27■■□□□ 1.8
CLK1-211ENST00000481641 NME9Q86XW9 330 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms