RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 FAM196AQ6ZSG2 479 aa19.85■□□□□ 0.77
NDC1-202ENST00000480952 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
NDC1-202ENST00000480952 CAMKK2Q96RR4 588 aa19.85■□□□□ 0.77
NDC1-202ENST00000480952 APBA3O96018 575 aa19.84■□□□□ 0.77
NDC1-202ENST00000480952 RGPD1P0DJD0 1748 aa19.84■□□□□ 0.77
NDC1-202ENST00000480952 NRAPQ86VF7 1730 aa19.84■□□□□ 0.77
NDC1-202ENST00000480952 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
NDC1-202ENST00000480952 MINK1Q8N4C8 1332 aaPredicted RBP19.83■□□□□ 0.77
NDC1-202ENST00000480952 TRAK1Q9UPV9 953 aa19.83■□□□□ 0.77
NDC1-202ENST00000480952 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
NDC1-202ENST00000480952 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
NDC1-202ENST00000480952 SPATA31A1Q5TZJ5 1347 aa19.81■□□□□ 0.76
NDC1-202ENST00000480952 PRR36Q9H6K5 1346 aa19.8■□□□□ 0.76
NDC1-202ENST00000480952 WASLO00401 505 aaPredicted RBP19.8■□□□□ 0.76
NDC1-202ENST00000480952 YY1P25490 414 aa19.8■□□□□ 0.76
NDC1-202ENST00000480952 DLC1Q96QB1 1528 aa19.8■□□□□ 0.76
NDC1-202ENST00000480952 CHRNA2Q15822 529 aa19.79■□□□□ 0.76
NDC1-202ENST00000480952 USP35Q9P2H5 1018 aa19.79■□□□□ 0.76
NDC1-202ENST00000480952 EVA1CP58658 441 aa19.78■□□□□ 0.76
NDC1-202ENST00000480952 PDE3BQ13370 1112 aa19.78■□□□□ 0.76
NDC1-202ENST00000480952 NBPF8Q3BBV2 869 aa19.78■□□□□ 0.76
NDC1-202ENST00000480952 NBPF14Q5TI25 921 aa19.78■□□□□ 0.76
NDC1-202ENST00000480952 TRPM3Q9HCF6 1732 aaPredicted RBP19.78■□□□□ 0.76
NDC1-202ENST00000480952 PARD3Q8TEW0 1356 aa19.78■□□□□ 0.76
NDC1-202ENST00000480952 KIAA0232Q92628 1395 aa19.78■□□□□ 0.76
NDC1-202ENST00000480952 ALS2Q96Q42 1657 aa19.76■□□□□ 0.75
NDC1-202ENST00000480952 THSD7AQ9UPZ6 1657 aa19.76■□□□□ 0.75
NDC1-202ENST00000480952 ADGRB2O60241 1585 aa19.76■□□□□ 0.75
NDC1-202ENST00000480952 ZC3H6P61129 1189 aaKnown RBP19.76■□□□□ 0.75
NDC1-202ENST00000480952 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
NDC1-202ENST00000480952 TULP4Q9NRJ4 1543 aa19.74■□□□□ 0.75
NDC1-202ENST00000480952 DCAF8L1A6NGE4 600 aa19.73■□□□□ 0.75
NDC1-202ENST00000480952 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
NDC1-202ENST00000480952 BARGINQ6ZT62 677 aa19.73■□□□□ 0.75
NDC1-202ENST00000480952 PPP1R1BQ9UD71 204 aaPredicted RBP19.73■□□□□ 0.75
NDC1-202ENST00000480952 KDM2AQ9Y2K7 1162 aa19.73■□□□□ 0.75
NDC1-202ENST00000480952 NUDT16Q96DE0 195 aaKnown RBP19.71■□□□□ 0.75
NDC1-202ENST00000480952 ADGRB1O14514 1584 aa19.7■□□□□ 0.74
NDC1-202ENST00000480952 SPON1Q9HCB6 807 aa19.7■□□□□ 0.74
NDC1-202ENST00000480952 LARP1Q6PKG0 1096 aaKnown RBP19.69■□□□□ 0.74
NDC1-202ENST00000480952 TCP11L2Q8N4U5 519 aa19.69■□□□□ 0.74
NDC1-202ENST00000480952 DCAF11Q8TEB1 546 aa19.69■□□□□ 0.74
NDC1-202ENST00000480952 KCNQ2O43526 872 aa19.67■□□□□ 0.74
NDC1-202ENST00000480952 SSH2Q76I76 1423 aa19.67■□□□□ 0.74
NDC1-202ENST00000480952 CRYBG1Q9Y4K1 1723 aa19.66■□□□□ 0.74
NDC1-202ENST00000480952 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
NDC1-202ENST00000480952 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
NDC1-202ENST00000480952 THRAP3Q9Y2W1 955 aaKnown RBP19.64■□□□□ 0.73
NDC1-202ENST00000480952 ATP7BP35670 1465 aa19.64■□□□□ 0.73
NDC1-202ENST00000480952 ACEP12821 1306 aa19.63■□□□□ 0.73
NDC1-202ENST00000480952 C11orf95C9JLR9 678 aaPredicted RBP19.62■□□□□ 0.73
NDC1-202ENST00000480952 STAC3Q96MF2 364 aa19.62■□□□□ 0.73
NDC1-202ENST00000480952 CCDC61Q9Y6R9 512 aa19.62■□□□□ 0.73
NDC1-202ENST00000480952 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
NDC1-202ENST00000480952 CAMTA1Q9Y6Y1 1673 aa19.6■□□□□ 0.73
NDC1-202ENST00000480952 POLR3AO14802 1390 aaPredicted RBP19.59■□□□□ 0.73
NDC1-202ENST00000480952 CPDO75976 1380 aa19.59■□□□□ 0.73
NDC1-202ENST00000480952 RREB1Q92766 1687 aa19.59■□□□□ 0.73
NDC1-202ENST00000480952 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
NDC1-202ENST00000480952 PLEKHG3A1L390 1219 aa19.59■□□□□ 0.73
NDC1-202ENST00000480952 NUP188Q5SRE5 1749 aa19.59■□□□□ 0.73
NDC1-202ENST00000480952 GCP02774 474 aa19.58■□□□□ 0.72
NDC1-202ENST00000480952 NLRP13Q86W25 1043 aa19.58■□□□□ 0.72
NDC1-202ENST00000480952 PLSCR1O15162 318 aa19.57■□□□□ 0.72
NDC1-202ENST00000480952 ZBTB7CA1YPR0 619 aa19.56■□□□□ 0.72
NDC1-202ENST00000480952 ITSN1Q15811 1721 aa19.56■□□□□ 0.72
NDC1-202ENST00000480952 USP19O94966 1318 aa19.55■□□□□ 0.72
NDC1-202ENST00000480952 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
NDC1-202ENST00000480952 OVOS2A0A0G2JMS6 1433 aa19.53■□□□□ 0.72
NDC1-202ENST00000480952 OVOS2A0A0J9YW53 1432 aa19.53■□□□□ 0.72
NDC1-202ENST00000480952 OVOS2Q6IE36 1432 aa19.53■□□□□ 0.72
NDC1-202ENST00000480952 DDB1Q16531 1140 aa19.53■□□□□ 0.72
NDC1-202ENST00000480952 RAB3GAP2Q9H2M9 1393 aa19.53■□□□□ 0.72
NDC1-202ENST00000480952 NRKQ7Z2Y5 1582 aa19.53■□□□□ 0.72
NDC1-202ENST00000480952 CRB1P82279 1406 aa19.52■□□□□ 0.72
NDC1-202ENST00000480952 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
NDC1-202ENST00000480952 COL5A2P05997 1499 aaPredicted RBP19.52■□□□□ 0.72
NDC1-202ENST00000480952 ZBTB7AO95365 584 aa19.51■□□□□ 0.71
NDC1-202ENST00000480952 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
NDC1-202ENST00000480952 TOM1L2Q6ZVM7 507 aa19.51■□□□□ 0.71
NDC1-202ENST00000480952 LMO7Q8WWI1 1683 aa19.5■□□□□ 0.71
NDC1-202ENST00000480952 PDGFDQ9GZP0 370 aaPredicted RBP19.5■□□□□ 0.71
NDC1-202ENST00000480952 ARHGEF28Q8N1W1 1705 aaKnown RBP19.49■□□□□ 0.71
NDC1-202ENST00000480952 NLRP6P59044 892 aa19.49■□□□□ 0.71
NDC1-202ENST00000480952 PTF1AQ7RTS3 328 aa19.49■□□□□ 0.71
NDC1-202ENST00000480952 PROM2Q8N271 834 aa19.48■□□□□ 0.71
NDC1-202ENST00000480952 ATF5Q9Y2D1 282 aaPredicted RBP19.48■□□□□ 0.71
NDC1-202ENST00000480952 ZNF784Q8NCA9 323 aaPredicted RBP19.47■□□□□ 0.71
NDC1-202ENST00000480952 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
NDC1-202ENST00000480952 PARP4Q9UKK3 1724 aaKnown RBP19.47■□□□□ 0.71
NDC1-202ENST00000480952 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
NDC1-202ENST00000480952 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
NDC1-202ENST00000480952 STK32BQ9NY57 414 aa19.46■□□□□ 0.71
NDC1-202ENST00000480952 PTGER2P43116 358 aa19.45■□□□□ 0.7
NDC1-202ENST00000480952 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
NDC1-202ENST00000480952 CDCA7Q9BWT1 371 aaPredicted RBP19.45■□□□□ 0.7
NDC1-202ENST00000480952 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
NDC1-202ENST00000480952 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
NDC1-202ENST00000480952 TXNRD1Q16881 649 aa19.43■□□□□ 0.7
NDC1-202ENST00000480952 CABP1Q9NZU7 370 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms