RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 SPATA31A3Q5VYP0 1347 aa18.66■□□□□ 0.58
SNRNP200-204ENST00000480615 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
SNRNP200-204ENST00000480615 JCADQ9P266 1359 aa18.65■□□□□ 0.58
SNRNP200-204ENST00000480615 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
SNRNP200-204ENST00000480615 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
SNRNP200-204ENST00000480615 NUTM2BA6NNL0 878 aaPredicted RBP18.64■□□□□ 0.57
SNRNP200-204ENST00000480615 NUTM2EB1AL46 878 aaPredicted RBP18.64■□□□□ 0.57
SNRNP200-204ENST00000480615 NUTM2AQ8IVF1 878 aaPredicted RBP18.64■□□□□ 0.57
SNRNP200-204ENST00000480615 SHPRHQ149N8 1683 aa18.64■□□□□ 0.57
SNRNP200-204ENST00000480615 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
SNRNP200-204ENST00000480615 PNPLA6Q8IY17 1366 aa18.64■□□□□ 0.57
SNRNP200-204ENST00000480615 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
SNRNP200-204ENST00000480615 ANKRD36BQ8N2N9 1353 aa18.63■□□□□ 0.57
SNRNP200-204ENST00000480615 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
SNRNP200-204ENST00000480615 ABTB2Q8N961 1025 aa18.63■□□□□ 0.57
SNRNP200-204ENST00000480615 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
SNRNP200-204ENST00000480615 TTC21BQ7Z4L5 1316 aa18.61■□□□□ 0.57
SNRNP200-204ENST00000480615 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
SNRNP200-204ENST00000480615 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
SNRNP200-204ENST00000480615 PANK3Q9H999 370 aa18.6■□□□□ 0.57
SNRNP200-204ENST00000480615 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
SNRNP200-204ENST00000480615 SSH2Q76I76 1423 aa18.59■□□□□ 0.57
SNRNP200-204ENST00000480615 HAP1P54257 671 aaPredicted RBP18.59■□□□□ 0.57
SNRNP200-204ENST00000480615 NME9Q86XW9 330 aa18.59■□□□□ 0.57
SNRNP200-204ENST00000480615 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
SNRNP200-204ENST00000480615 ZRANB1Q9UGI0 708 aa18.58■□□□□ 0.56
SNRNP200-204ENST00000480615 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
SNRNP200-204ENST00000480615 NSD3Q9BZ95 1437 aa18.58■□□□□ 0.56
SNRNP200-204ENST00000480615 NLRP6P59044 892 aa18.57■□□□□ 0.56
SNRNP200-204ENST00000480615 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
SNRNP200-204ENST00000480615 TTC21AQ8NDW8 1320 aa18.56■□□□□ 0.56
SNRNP200-204ENST00000480615 ABCA3Q99758 1704 aa18.56■□□□□ 0.56
SNRNP200-204ENST00000480615 SOX12O15370 315 aa18.56■□□□□ 0.56
SNRNP200-204ENST00000480615 LRP6O75581 1613 aa18.55■□□□□ 0.56
SNRNP200-204ENST00000480615 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
SNRNP200-204ENST00000480615 BRD4O60885 1362 aaPredicted RBP18.55■□□□□ 0.56
SNRNP200-204ENST00000480615 SPATA31A6Q5VVP1 1343 aa18.55■□□□□ 0.56
SNRNP200-204ENST00000480615 MEX3CQ5U5Q3 659 aaKnown RBP18.54■□□□□ 0.56
SNRNP200-204ENST00000480615 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
SNRNP200-204ENST00000480615 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
SNRNP200-204ENST00000480615 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
SNRNP200-204ENST00000480615 MARF1Q9Y4F3 1742 aaKnown RBP18.53■□□□□ 0.56
SNRNP200-204ENST00000480615 ZNF316A6NFI3 1004 aaPredicted RBP18.52■□□□□ 0.56
SNRNP200-204ENST00000480615 GGNBP2Q9H3C7 697 aa18.52■□□□□ 0.56
SNRNP200-204ENST00000480615 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
SNRNP200-204ENST00000480615 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.56
SNRNP200-204ENST00000480615 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
SNRNP200-204ENST00000480615 FYB1O15117 783 aa18.5■□□□□ 0.55
SNRNP200-204ENST00000480615 C8orf37Q96NL8 207 aa18.5■□□□□ 0.55
SNRNP200-204ENST00000480615 ZC3H6P61129 1189 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-204ENST00000480615 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
SNRNP200-204ENST00000480615 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
SNRNP200-204ENST00000480615 DDX10Q13206 875 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-204ENST00000480615 COG3Q96JB2 828 aa18.49■□□□□ 0.55
SNRNP200-204ENST00000480615 USP19O94966 1318 aa18.48■□□□□ 0.55
SNRNP200-204ENST00000480615 GCP02774 474 aa18.48■□□□□ 0.55
SNRNP200-204ENST00000480615 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.55
SNRNP200-204ENST00000480615 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.55
SNRNP200-204ENST00000480615 FBLN1P23142 703 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 SLIT3O75094 1523 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 USP31Q70CQ4 1352 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 KIAA0232Q92628 1395 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 USP54Q70EL1 1684 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 CHRNA2Q15822 529 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
SNRNP200-204ENST00000480615 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
SNRNP200-204ENST00000480615 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
SNRNP200-204ENST00000480615 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
SNRNP200-204ENST00000480615 FAM83GA6ND36 823 aa18.42■□□□□ 0.54
SNRNP200-204ENST00000480615 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
SNRNP200-204ENST00000480615 ANKRD26Q9UPS8 1709 aa18.42■□□□□ 0.54
SNRNP200-204ENST00000480615 NFAT5O94916 1531 aa18.41■□□□□ 0.54
SNRNP200-204ENST00000480615 LTN1O94822 1766 aa18.41■□□□□ 0.54
SNRNP200-204ENST00000480615 AFF2P51816 1311 aa18.41■□□□□ 0.54
SNRNP200-204ENST00000480615 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
SNRNP200-204ENST00000480615 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
SNRNP200-204ENST00000480615 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
SNRNP200-204ENST00000480615 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
SNRNP200-204ENST00000480615 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
SNRNP200-204ENST00000480615 BTG4Q9NY30 223 aa18.38■□□□□ 0.53
SNRNP200-204ENST00000480615 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
SNRNP200-204ENST00000480615 NSD2O96028 1365 aa18.37■□□□□ 0.53
SNRNP200-204ENST00000480615 ARHGEF25Q86VW2 580 aa18.37■□□□□ 0.53
SNRNP200-204ENST00000480615 USP21Q9UK80 565 aa18.37■□□□□ 0.53
SNRNP200-204ENST00000480615 CPDO75976 1380 aa18.36■□□□□ 0.53
SNRNP200-204ENST00000480615 PPM1GO15355 546 aaPredicted RBP18.36■□□□□ 0.53
SNRNP200-204ENST00000480615 MAP2P11137 1827 aaKnown RBP18.35■□□□□ 0.53
SNRNP200-204ENST00000480615 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
SNRNP200-204ENST00000480615 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
SNRNP200-204ENST00000480615 AMPHP49418 695 aa18.34■□□□□ 0.53
SNRNP200-204ENST00000480615 FNBP4Q8N3X1 1017 aaPredicted RBP18.34■□□□□ 0.53
SNRNP200-204ENST00000480615 RGS17Q9UGC6 210 aaPredicted RBP18.34■□□□□ 0.53
SNRNP200-204ENST00000480615 AXIN2Q9Y2T1 843 aa18.34■□□□□ 0.53
SNRNP200-204ENST00000480615 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
SNRNP200-204ENST00000480615 SLIT2O94813 1529 aa18.33■□□□□ 0.53
SNRNP200-204ENST00000480615 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.53
SNRNP200-204ENST00000480615 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.53
SNRNP200-204ENST00000480615 LMO7Q8WWI1 1683 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms