RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PUS7Q96PZ0 661 aaKnown RBP21.15■□□□□ 0.98
ABCF3-213ENST00000480539 CPSF1Q10570 1443 aaKnown RBP21.14■□□□□ 0.98
ABCF3-213ENST00000480539 PLEKHG5O94827 1062 aa21.14■□□□□ 0.97
ABCF3-213ENST00000480539 SLC12A5Q9H2X9 1139 aa21.14■□□□□ 0.97
ABCF3-213ENST00000480539 NINLQ9Y2I6 1382 aa21.13■□□□□ 0.97
ABCF3-213ENST00000480539 CDCA8Q53HL2 280 aa21.13■□□□□ 0.97
ABCF3-213ENST00000480539 A0A1W2PP64 1363 aa21.12■□□□□ 0.97
ABCF3-213ENST00000480539 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
ABCF3-213ENST00000480539 POLR3GLQ9BT43 218 aa21.12■□□□□ 0.97
ABCF3-213ENST00000480539 CRYBG1Q9Y4K1 1723 aa21.11■□□□□ 0.97
ABCF3-213ENST00000480539 PIK3C2AO00443 1686 aa21.11■□□□□ 0.97
ABCF3-213ENST00000480539 SSH2Q76I76 1423 aa21.1■□□□□ 0.97
ABCF3-213ENST00000480539 PHRF1Q9P1Y6 1649 aaKnown RBP21.09■□□□□ 0.97
ABCF3-213ENST00000480539 MEX3CQ5U5Q3 659 aaKnown RBP21.09■□□□□ 0.97
ABCF3-213ENST00000480539 HDGFL2Q7Z4V5 671 aaPredicted RBP21.09■□□□□ 0.97
ABCF3-213ENST00000480539 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
ABCF3-213ENST00000480539 NUTM2GQ5VZR2 741 aa21.08■□□□□ 0.97
ABCF3-213ENST00000480539 CABLES1Q8TDN4 633 aa21.08■□□□□ 0.97
ABCF3-213ENST00000480539 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-213ENST00000480539 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-213ENST00000480539 TERF2IPQ9NYB0 399 aa21.07■□□□□ 0.96
ABCF3-213ENST00000480539 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
ABCF3-213ENST00000480539 TTC21BQ7Z4L5 1316 aa21.06■□□□□ 0.96
ABCF3-213ENST00000480539 EDC4Q6P2E9 1401 aaKnown RBP21.06■□□□□ 0.96
ABCF3-213ENST00000480539 ADAMTS2O95450 1211 aa21.06■□□□□ 0.96
ABCF3-213ENST00000480539 MARF1Q9Y4F3 1742 aaKnown RBP21.05■□□□□ 0.96
ABCF3-213ENST00000480539 HAP1P54257 671 aaPredicted RBP21.05■□□□□ 0.96
ABCF3-213ENST00000480539 ZEB1P37275 1124 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-213ENST00000480539 ABTB2Q8N961 1025 aa21.04■□□□□ 0.96
ABCF3-213ENST00000480539 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
ABCF3-213ENST00000480539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.96
ABCF3-213ENST00000480539 KIF7Q2M1P5 1343 aa21.03■□□□□ 0.96
ABCF3-213ENST00000480539 TTC21AQ8NDW8 1320 aa21.03■□□□□ 0.96
ABCF3-213ENST00000480539 C8orf37Q96NL8 207 aa21.02■□□□□ 0.96
ABCF3-213ENST00000480539 USP19O94966 1318 aa21.01■□□□□ 0.95
ABCF3-213ENST00000480539 USP54Q70EL1 1684 aa20.99■□□□□ 0.95
ABCF3-213ENST00000480539 SLIT3O75094 1523 aa20.99■□□□□ 0.95
ABCF3-213ENST00000480539 NSD3Q9BZ95 1437 aa20.99■□□□□ 0.95
ABCF3-213ENST00000480539 NME9Q86XW9 330 aa20.99■□□□□ 0.95
ABCF3-213ENST00000480539 NLRP6P59044 892 aa20.98■□□□□ 0.95
ABCF3-213ENST00000480539 PLCH1Q4KWH8 1693 aa20.98■□□□□ 0.95
ABCF3-213ENST00000480539 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
ABCF3-213ENST00000480539 NLRP13Q86W25 1043 aa20.97■□□□□ 0.95
ABCF3-213ENST00000480539 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
ABCF3-213ENST00000480539 AFF2P51816 1311 aa20.97■□□□□ 0.95
ABCF3-213ENST00000480539 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
ABCF3-213ENST00000480539 OVOS2A0A0J9YW53 1432 aa20.95■□□□□ 0.95
ABCF3-213ENST00000480539 OVOS2Q6IE36 1432 aa20.95■□□□□ 0.95
ABCF3-213ENST00000480539 WASHC2AQ641Q2 1341 aa20.95■□□□□ 0.94
ABCF3-213ENST00000480539 NGLY1Q96IV0 654 aa20.94■□□□□ 0.94
ABCF3-213ENST00000480539 RGS17Q9UGC6 210 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-213ENST00000480539 COL14A1Q05707 1796 aaKnown RBP20.94■□□□□ 0.94
ABCF3-213ENST00000480539 KIAA0232Q92628 1395 aa20.94■□□□□ 0.94
ABCF3-213ENST00000480539 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
ABCF3-213ENST00000480539 USP31Q70CQ4 1352 aa20.93■□□□□ 0.94
ABCF3-213ENST00000480539 NFAT5O94916 1531 aa20.93■□□□□ 0.94
ABCF3-213ENST00000480539 SOX12O15370 315 aa20.92■□□□□ 0.94
ABCF3-213ENST00000480539 ZC3H6P61129 1189 aaKnown RBP20.92■□□□□ 0.94
ABCF3-213ENST00000480539 SLIT2O94813 1529 aa20.92■□□□□ 0.94
ABCF3-213ENST00000480539 GCP02774 474 aa20.91■□□□□ 0.94
ABCF3-213ENST00000480539 PRDM11Q9NQV5 511 aa20.91■□□□□ 0.94
ABCF3-213ENST00000480539 PANK3Q9H999 370 aa20.9■□□□□ 0.94
ABCF3-213ENST00000480539 NRAPQ86VF7 1730 aa20.9■□□□□ 0.94
ABCF3-213ENST00000480539 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.9■□□□□ 0.94
ABCF3-213ENST00000480539 NWD2Q9ULI1 1742 aa20.9■□□□□ 0.94
ABCF3-213ENST00000480539 ZBTB7CA1YPR0 619 aa20.89■□□□□ 0.93
ABCF3-213ENST00000480539 CHRNA2Q15822 529 aa20.89■□□□□ 0.93
ABCF3-213ENST00000480539 BCL9LQ86UU0 1499 aa20.88■□□□□ 0.93
ABCF3-213ENST00000480539 CPDO75976 1380 aa20.88■□□□□ 0.93
ABCF3-213ENST00000480539 FAM83GA6ND36 823 aa20.88■□□□□ 0.93
ABCF3-213ENST00000480539 GGNBP2Q9H3C7 697 aa20.88■□□□□ 0.93
ABCF3-213ENST00000480539 USP21Q9UK80 565 aa20.88■□□□□ 0.93
ABCF3-213ENST00000480539 LMO7Q8WWI1 1683 aa20.88■□□□□ 0.93
ABCF3-213ENST00000480539 ZNF772Q68DY9 489 aaPredicted RBP20.87■□□□□ 0.93
ABCF3-213ENST00000480539 POTEAQ6S8J7 498 aa20.87■□□□□ 0.93
ABCF3-213ENST00000480539 FNBP4Q8N3X1 1017 aaPredicted RBP20.87■□□□□ 0.93
ABCF3-213ENST00000480539 FYB1O15117 783 aa20.86■□□□□ 0.93
ABCF3-213ENST00000480539 COG3Q96JB2 828 aa20.86■□□□□ 0.93
ABCF3-213ENST00000480539 KCNH5Q8NCM2 988 aa20.85■□□□□ 0.93
ABCF3-213ENST00000480539 ANKRD26Q9UPS8 1709 aa20.84■□□□□ 0.93
ABCF3-213ENST00000480539 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
ABCF3-213ENST00000480539 BTG4Q9NY30 223 aa20.84■□□□□ 0.93
ABCF3-213ENST00000480539 ATRNO75882 1429 aa20.84■□□□□ 0.93
ABCF3-213ENST00000480539 LTN1O94822 1766 aa20.84■□□□□ 0.93
ABCF3-213ENST00000480539 CAMTA1Q9Y6Y1 1673 aa20.82■□□□□ 0.92
ABCF3-213ENST00000480539 UNC5CLQ8IV45 518 aa20.81■□□□□ 0.92
ABCF3-213ENST00000480539 COL18A1P39060 1754 aa20.81■□□□□ 0.92
ABCF3-213ENST00000480539 ARHGEF25Q86VW2 580 aa20.8■□□□□ 0.92
ABCF3-213ENST00000480539 QTRT2Q9H974 415 aaKnown RBP20.8■□□□□ 0.92
ABCF3-213ENST00000480539 ABCC6O95255 1503 aa20.79■□□□□ 0.92
ABCF3-213ENST00000480539 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
ABCF3-213ENST00000480539 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
ABCF3-213ENST00000480539 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
ABCF3-213ENST00000480539 COL5A2P05997 1499 aaPredicted RBP20.79■□□□□ 0.92
ABCF3-213ENST00000480539 GLI3P10071 1580 aa20.78■□□□□ 0.92
ABCF3-213ENST00000480539 FBLN1P23142 703 aa20.78■□□□□ 0.92
ABCF3-213ENST00000480539 STRN4Q9NRL3 753 aa20.78■□□□□ 0.92
ABCF3-213ENST00000480539 NSD2O96028 1365 aa20.77■□□□□ 0.92
ABCF3-213ENST00000480539 RGPD5Q99666 1765 aa20.77■□□□□ 0.91
ABCF3-213ENST00000480539 ILDR2Q71H61 639 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms