RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 MON2Q7Z3U7 1717 aa15.1■□□□□ 0.01
APTX-223ENST00000479656 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
APTX-223ENST00000479656 SSH2Q76I76 1423 aa15.08■□□□□ 0
APTX-223ENST00000479656 MSH6P52701 1360 aa15.08■□□□□ 0
APTX-223ENST00000479656 MTHFSP49914 203 aa15.08■□□□□ 0
APTX-223ENST00000479656 CADPS2Q86UW7 1296 aa15.08■□□□□ 0
APTX-223ENST00000479656 KIF20BQ96Q89 1820 aa15.07■□□□□ 0
APTX-223ENST00000479656 COG3Q96JB2 828 aa15.07■□□□□ 0
APTX-223ENST00000479656 C1orf167Q5SNV9 1468 aa15.07■□□□□ 0
APTX-223ENST00000479656 FBLN1P23142 703 aa15.06■□□□□ 0
APTX-223ENST00000479656 FOXO3O43524 673 aa15.06■□□□□ 0
APTX-223ENST00000479656 PSME1Q06323 249 aa15.06■□□□□ 0
APTX-223ENST00000479656 XIRP1Q702N8 1843 aaKnown RBP15.05■□□□□ 0
APTX-223ENST00000479656 DCCP43146 1447 aa15.05■□□□□ 0
APTX-223ENST00000479656 TTC21AQ8NDW8 1320 aa15.05■□□□□ -0
APTX-223ENST00000479656 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
APTX-223ENST00000479656 HNRNPUQ00839 825 aaKnown RBP eCLIP15.05■□□□□ -0
APTX-223ENST00000479656 ANKRD26Q9UPS8 1709 aa15.05■□□□□ -0
APTX-223ENST00000479656 MST1RQ04912 1400 aa15.05■□□□□ -0
APTX-223ENST00000479656 NRKQ7Z2Y5 1582 aa15.04■□□□□ -0
APTX-223ENST00000479656 CENPBP07199 599 aaPredicted RBP15.03■□□□□ -0
APTX-223ENST00000479656 XPCQ01831 940 aaPredicted RBP15.02■□□□□ -0
APTX-223ENST00000479656 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
APTX-223ENST00000479656 ADAMTS8Q9UP79 889 aa15.02■□□□□ -0
APTX-223ENST00000479656 SCAF1Q9H7N4 1312 aaKnown RBP15.02□□□□□ -0.01
APTX-223ENST00000479656 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
APTX-223ENST00000479656 NUTM2GQ5VZR2 741 aa15.01□□□□□ -0.01
APTX-223ENST00000479656 ABTB2Q8N961 1025 aa15.01□□□□□ -0.01
APTX-223ENST00000479656 POLKQ9UBT6 870 aa15.01□□□□□ -0.01
APTX-223ENST00000479656 NLRP6P59044 892 aa15.01□□□□□ -0.01
APTX-223ENST00000479656 CFAP53Q96M91 514 aa15.01□□□□□ -0.01
APTX-223ENST00000479656 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
APTX-223ENST00000479656 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
APTX-223ENST00000479656 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
APTX-223ENST00000479656 DDX17Q92841 729 aaKnown RBP14.99□□□□□ -0.01
APTX-223ENST00000479656 SLAIN2Q9P270 581 aa14.99□□□□□ -0.01
APTX-223ENST00000479656 OVOS2A0A0J9YW53 1432 aa14.99□□□□□ -0.01
APTX-223ENST00000479656 OVOS2Q6IE36 1432 aa14.99□□□□□ -0.01
APTX-223ENST00000479656 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
APTX-223ENST00000479656 RRS1Q15050 365 aaKnown RBP14.99□□□□□ -0.01
APTX-223ENST00000479656 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
APTX-223ENST00000479656 AATKQ6ZMQ8 1374 aa14.98□□□□□ -0.01
APTX-223ENST00000479656 SOX12O15370 315 aa14.98□□□□□ -0.01
APTX-223ENST00000479656 PIK3C2AO00443 1686 aa14.96□□□□□ -0.01
APTX-223ENST00000479656 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
APTX-223ENST00000479656 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
APTX-223ENST00000479656 KIF1AQ12756 1690 aa14.96□□□□□ -0.01
APTX-223ENST00000479656 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
APTX-223ENST00000479656 LTBP4Q8N2S1 1624 aa14.95□□□□□ -0.02
APTX-223ENST00000479656 PNPLA6Q8IY17 1366 aa14.94□□□□□ -0.02
APTX-223ENST00000479656 NPHP3Q7Z494 1330 aa14.94□□□□□ -0.02
APTX-223ENST00000479656 DIAPH1O60610 1272 aaKnown RBP14.93□□□□□ -0.02
APTX-223ENST00000479656 INSRP06213 1382 aa14.93□□□□□ -0.02
APTX-223ENST00000479656 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
APTX-223ENST00000479656 CCDC146Q8IYE0 955 aa14.93□□□□□ -0.02
APTX-223ENST00000479656 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
APTX-223ENST00000479656 SALL2Q9Y467 1007 aaPredicted RBP14.93□□□□□ -0.02
APTX-223ENST00000479656 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
APTX-223ENST00000479656 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
APTX-223ENST00000479656 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.022e-8■■■■■ 37
APTX-223ENST00000479656 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
APTX-223ENST00000479656 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
APTX-223ENST00000479656 SHPRHQ149N8 1683 aa14.92□□□□□ -0.02
APTX-223ENST00000479656 MAP3K19Q56UN5 1328 aa14.91□□□□□ -0.02
APTX-223ENST00000479656 ZBED9Q6R2W3 1325 aa14.91□□□□□ -0.02
APTX-223ENST00000479656 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
APTX-223ENST00000479656 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
APTX-223ENST00000479656 MARF1Q9Y4F3 1742 aaKnown RBP14.9□□□□□ -0.02
APTX-223ENST00000479656 AMPHP49418 695 aa14.89□□□□□ -0.03
APTX-223ENST00000479656 HSP90AB2PQ58FF8 381 aa14.89□□□□□ -0.03
APTX-223ENST00000479656 CDK12Q9NYV4 1490 aaPredicted RBP14.89□□□□□ -0.03
APTX-223ENST00000479656 SBNO1A3KN83 1393 aa14.89□□□□□ -0.03
APTX-223ENST00000479656 IL13P35225 146 aa14.89□□□□□ -0.03
APTX-223ENST00000479656 KCNH5Q8NCM2 988 aa14.89□□□□□ -0.03
APTX-223ENST00000479656 USP54Q70EL1 1684 aa14.88□□□□□ -0.03
APTX-223ENST00000479656 GCP02774 474 aa14.88□□□□□ -0.03
APTX-223ENST00000479656 PXDNQ92626 1479 aa14.88□□□□□ -0.03
APTX-223ENST00000479656 SPATA31A3Q5VYP0 1347 aa14.87□□□□□ -0.03
APTX-223ENST00000479656 APAF1O14727 1248 aa14.87□□□□□ -0.03
APTX-223ENST00000479656 SOS2Q07890 1332 aaPredicted RBP14.87□□□□□ -0.03
APTX-223ENST00000479656 RUNDC1Q96C34 613 aa14.86□□□□□ -0.03
APTX-223ENST00000479656 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
APTX-223ENST00000479656 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
APTX-223ENST00000479656 USP19O94966 1318 aa14.85□□□□□ -0.03
APTX-223ENST00000479656 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
APTX-223ENST00000479656 ALS2Q96Q42 1657 aa14.85□□□□□ -0.03
APTX-223ENST00000479656 TNS3Q68CZ2 1445 aa14.85□□□□□ -0.03
APTX-223ENST00000479656 HOXC9P31274 260 aa14.84□□□□□ -0.03
APTX-223ENST00000479656 CABLES1Q8TDN4 633 aa14.84□□□□□ -0.03
APTX-223ENST00000479656 FLT4P35916 1363 aa14.84□□□□□ -0.03
APTX-223ENST00000479656 HMOX1P09601 288 aa14.84□□□□□ -0.03
APTX-223ENST00000479656 PLEKHF1Q96S99 279 aa14.84□□□□□ -0.03
APTX-223ENST00000479656 FCHSD2O94868 740 aa14.83□□□□□ -0.04
APTX-223ENST00000479656 TCP11L2Q8N4U5 519 aa14.83□□□□□ -0.04
APTX-223ENST00000479656 NFAT5O94916 1531 aa14.83□□□□□ -0.04
APTX-223ENST00000479656 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
APTX-223ENST00000479656 IP6K1Q92551 441 aa14.82□□□□□ -0.04
APTX-223ENST00000479656 SLIT3O75094 1523 aa14.82□□□□□ -0.04
APTX-223ENST00000479656 ARHGEF10O15013 1369 aa14.82□□□□□ -0.04
APTX-223ENST00000479656 KIF24Q5T7B8 1368 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms