RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 HRCP23327 699 aa9.25□□□□□ -0.93
CMSS1-204ENST00000479555 FOXJ1Q92949 421 aa9.25□□□□□ -0.93
CMSS1-204ENST00000479555 SPTLC1O15269 473 aa9.24□□□□□ -0.93
CMSS1-204ENST00000479555 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
CMSS1-204ENST00000479555 NNTQ13423 1086 aa9.24□□□□□ -0.93
CMSS1-204ENST00000479555 LYPD8Q6UX82 237 aa9.24□□□□□ -0.93
CMSS1-204ENST00000479555 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
CMSS1-204ENST00000479555 WIPF1O43516 503 aa9.23□□□□□ -0.93
CMSS1-204ENST00000479555 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
CMSS1-204ENST00000479555 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
CMSS1-204ENST00000479555 QPCTQ16769 361 aa9.22□□□□□ -0.93
CMSS1-204ENST00000479555 TSC1Q92574 1164 aa9.22□□□□□ -0.93
CMSS1-204ENST00000479555 ZFP42Q96MM3 310 aa9.22□□□□□ -0.93
CMSS1-204ENST00000479555 LIMD1Q9UGP4 676 aa9.22□□□□□ -0.93
CMSS1-204ENST00000479555 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.94
CMSS1-204ENST00000479555 VARSP26640 1264 aaKnown RBP9.21□□□□□ -0.94
CMSS1-204ENST00000479555 AK7Q96M32 723 aa9.21□□□□□ -0.94
CMSS1-204ENST00000479555 ZBTB3Q9H5J0 574 aa9.21□□□□□ -0.94
CMSS1-204ENST00000479555 SOBPA7XYQ1 873 aa9.2□□□□□ -0.94
CMSS1-204ENST00000479555 TIMP2P16035 220 aa9.2□□□□□ -0.94
CMSS1-204ENST00000479555 ARID5BQ14865 1188 aa9.2□□□□□ -0.94
CMSS1-204ENST00000479555 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
CMSS1-204ENST00000479555 WDR4P57081 412 aaKnown RBP9.19□□□□□ -0.94
CMSS1-204ENST00000479555 PURBQ96QR8 312 aaKnown RBP9.19□□□□□ -0.94
CMSS1-204ENST00000479555 LOC100996750A0A140TA64 210 aa9.18□□□□□ -0.94
CMSS1-204ENST00000479555 GJA5P36382 358 aa9.18□□□□□ -0.94
CMSS1-204ENST00000479555 PDE4DQ08499 809 aa9.18□□□□□ -0.94
CMSS1-204ENST00000479555 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
CMSS1-204ENST00000479555 KRTAP4-6Q9BYQ5 205 aa9.18□□□□□ -0.94
CMSS1-204ENST00000479555 ZFAND3Q9H8U3 227 aa9.18□□□□□ -0.94
CMSS1-204ENST00000479555 NXF1Q9UBU9 619 aaKnown RBP9.18□□□□□ -0.94
CMSS1-204ENST00000479555 GMPRP36959 345 aa9.17□□□□□ -0.94
CMSS1-204ENST00000479555 SLC24A3Q9HC58 644 aa9.17□□□□□ -0.94
CMSS1-204ENST00000479555 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 PLEKHG3A1L390 1219 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 ADH1CP00326 375 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 NR3C2P08235 984 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 INSM1Q01101 510 aaPredicted RBP9.16□□□□□ -0.94
CMSS1-204ENST00000479555 AGERQ15109 404 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 DIXDC1Q155Q3 683 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 MRPL14Q6P1L8 145 aaKnown RBP9.16□□□□□ -0.94
CMSS1-204ENST00000479555 FAM174AQ8TBP5 190 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
CMSS1-204ENST00000479555 NUTM2BA6NNL0 878 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-204ENST00000479555 NUTM2EB1AL46 878 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-204ENST00000479555 NUTM2DQ5VT03 806 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-204ENST00000479555 NUTM2AQ8IVF1 878 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-204ENST00000479555 KLF16Q9BXK1 252 aaPredicted RBP9.15□□□□□ -0.94
CMSS1-204ENST00000479555 RTL5Q5HYW3 569 aaPredicted RBP9.14□□□□□ -0.95
CMSS1-204ENST00000479555 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
CMSS1-204ENST00000479555 SLC16A10Q8TF71 515 aa9.14□□□□□ -0.95
CMSS1-204ENST00000479555 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
CMSS1-204ENST00000479555 ZIC2O95409 532 aaPredicted RBP9.13□□□□□ -0.95
CMSS1-204ENST00000479555 C6orf118Q5T5N4 469 aa9.13□□□□□ -0.95
CMSS1-204ENST00000479555 MPNDQ8N594 471 aa9.13□□□□□ -0.95
CMSS1-204ENST00000479555 H3BM21 787 aa9.12□□□□□ -0.95
CMSS1-204ENST00000479555 CDK15Q96Q40 435 aa9.12□□□□□ -0.95
CMSS1-204ENST00000479555 LILRB3O75022 631 aa9.11□□□□□ -0.95
CMSS1-204ENST00000479555 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
CMSS1-204ENST00000479555 GRM5P41594 1212 aa9.11□□□□□ -0.95
CMSS1-204ENST00000479555 POLR3EQ9NVU0 708 aa9.11□□□□□ -0.95
CMSS1-204ENST00000479555 SCARF1Q14162 830 aa9.1□□□□□ -0.95
CMSS1-204ENST00000479555 MAGEB6P1A0A0J9YX57 407 aa9.09□□□□□ -0.95
CMSS1-204ENST00000479555 IRF7Q92985 503 aa9.09□□□□□ -0.95
CMSS1-204ENST00000479555 FSHRP23945 695 aa9.08□□□□□ -0.96
CMSS1-204ENST00000479555 CLK2P49760 499 aaKnown RBP9.08□□□□□ -0.96
CMSS1-204ENST00000479555 BPHLQ86WA6 291 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-204ENST00000479555 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
CMSS1-204ENST00000479555 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
CMSS1-204ENST00000479555 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
CMSS1-204ENST00000479555 C1QTNF2Q9BXJ5 285 aa9.06□□□□□ -0.96
CMSS1-204ENST00000479555 NR5A1Q13285 461 aa9.05□□□□□ -0.96
CMSS1-204ENST00000479555 SH3BP5LQ7L8J4 393 aa9.05□□□□□ -0.96
CMSS1-204ENST00000479555 NPAS3Q8IXF0 933 aa9.05□□□□□ -0.96
CMSS1-204ENST00000479555 HELBQ8NG08 1087 aaPredicted RBP9.05□□□□□ -0.96
CMSS1-204ENST00000479555 MAN1A2O60476 641 aa9.04□□□□□ -0.96
CMSS1-204ENST00000479555 BMP2P12643 396 aa9.04□□□□□ -0.96
CMSS1-204ENST00000479555 CTDSPL2Q05D32 466 aa9.04□□□□□ -0.96
CMSS1-204ENST00000479555 TUSC1Q2TAM9 212 aa9.04□□□□□ -0.96
CMSS1-204ENST00000479555 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
CMSS1-204ENST00000479555 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
CMSS1-204ENST00000479555 LINC00528Q8N1L1 170 aa9.03□□□□□ -0.96
CMSS1-204ENST00000479555 MEIOBQ8N635 442 aa9.03□□□□□ -0.96
CMSS1-204ENST00000479555 LRRN4Q8WUT4 740 aa9.03□□□□□ -0.96
CMSS1-204ENST00000479555 NBPF14Q5TI25 921 aa9.02□□□□□ -0.97
CMSS1-204ENST00000479555 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
CMSS1-204ENST00000479555 DNMT3LQ9UJW3 386 aa9.01□□□□□ -0.97
CMSS1-204ENST00000479555 ARMC2Q8NEN0 867 aa9□□□□□ -0.97
CMSS1-204ENST00000479555 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
CMSS1-204ENST00000479555 CBLBQ13191 982 aa8.99□□□□□ -0.97
CMSS1-204ENST00000479555 PROCA1Q8NCQ7 364 aaPredicted RBP8.99□□□□□ -0.97
CMSS1-204ENST00000479555 PPFIA3O75145 1194 aa8.98□□□□□ -0.97
CMSS1-204ENST00000479555 TRMT44Q8IYL2 757 aaKnown RBP8.98□□□□□ -0.97
CMSS1-204ENST00000479555 CCDC116Q8IYX3 515 aa8.98□□□□□ -0.97
CMSS1-204ENST00000479555 MAP4K5Q9Y4K4 846 aa8.98□□□□□ -0.97
CMSS1-204ENST00000479555 SOS2Q07890 1332 aaPredicted RBP8.98□□□□□ -0.97
CMSS1-204ENST00000479555 UPP2O95045 317 aa8.97□□□□□ -0.97
CMSS1-204ENST00000479555 NR6A1Q15406 480 aa8.97□□□□□ -0.97
CMSS1-204ENST00000479555 FIGNL2A6NMB9 653 aa8.96□□□□□ -0.98
CMSS1-204ENST00000479555 VSIG8P0DPA2 414 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms