RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 POLR3AO14802 1390 aaPredicted RBP25.47■■□□□ 1.67
HLA-A-206ENST00000479320 ACEP12821 1306 aa25.47■■□□□ 1.67
HLA-A-206ENST00000479320 GJD4Q96KN9 370 aaPredicted RBP25.47■■□□□ 1.67
HLA-A-206ENST00000479320 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
HLA-A-206ENST00000479320 FAM83GA6ND36 823 aa25.44■■□□□ 1.66
HLA-A-206ENST00000479320 PLCH1Q4KWH8 1693 aa25.44■■□□□ 1.66
HLA-A-206ENST00000479320 TONSLQ96HA7 1378 aa25.43■■□□□ 1.66
HLA-A-206ENST00000479320 NWD2Q9ULI1 1742 aa25.42■■□□□ 1.66
HLA-A-206ENST00000479320 CRYBG1Q9Y4K1 1723 aa25.42■■□□□ 1.66
HLA-A-206ENST00000479320 PPIP5K1Q6PFW1 1433 aa25.42■■□□□ 1.66
HLA-A-206ENST00000479320 GLI3P10071 1580 aa25.39■■□□□ 1.66
HLA-A-206ENST00000479320 RALGAPBQ86X10 1494 aa25.39■■□□□ 1.66
HLA-A-206ENST00000479320 EVC2Q86UK5 1308 aa25.39■■□□□ 1.66
HLA-A-206ENST00000479320 VPS72Q15906 364 aa25.38■■□□□ 1.65
HLA-A-206ENST00000479320 CABP1Q9NZU7 370 aa25.37■■□□□ 1.65
HLA-A-206ENST00000479320 NUTM2GQ5VZR2 741 aa25.37■■□□□ 1.65
HLA-A-206ENST00000479320 COL14A1Q05707 1796 aaKnown RBP25.36■■□□□ 1.65
HLA-A-206ENST00000479320 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
HLA-A-206ENST00000479320 BTG4Q9NY30 223 aa25.36■■□□□ 1.65
HLA-A-206ENST00000479320 ABTB2Q8N961 1025 aa25.35■■□□□ 1.65
HLA-A-206ENST00000479320 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
HLA-A-206ENST00000479320 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
HLA-A-206ENST00000479320 PHRF1Q9P1Y6 1649 aaKnown RBP25.33■■□□□ 1.65
HLA-A-206ENST00000479320 NRAPQ86VF7 1730 aa25.33■■□□□ 1.65
HLA-A-206ENST00000479320 PRDM11Q9NQV5 511 aa25.32■■□□□ 1.64
HLA-A-206ENST00000479320 BRD4O60885 1362 aaPredicted RBP25.3■■□□□ 1.64
HLA-A-206ENST00000479320 KIAA0232Q92628 1395 aa25.3■■□□□ 1.64
HLA-A-206ENST00000479320 ONECUT3O60422 494 aaPredicted RBP25.29■■□□□ 1.64
HLA-A-206ENST00000479320 ZC3H6P61129 1189 aaKnown RBP25.29■■□□□ 1.64
HLA-A-206ENST00000479320 USP6P35125 1406 aa25.29■■□□□ 1.64
HLA-A-206ENST00000479320 NLRP13Q86W25 1043 aa25.28■■□□□ 1.64
HLA-A-206ENST00000479320 BRWD3Q6RI45 1802 aa25.28■■□□□ 1.64
HLA-A-206ENST00000479320 SBNO2Q9Y2G9 1366 aa25.27■■□□□ 1.64
HLA-A-206ENST00000479320 CHRNA2Q15822 529 aa25.27■■□□□ 1.64
HLA-A-206ENST00000479320 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
HLA-A-206ENST00000479320 USP19O94966 1318 aa25.26■■□□□ 1.63
HLA-A-206ENST00000479320 SSH2Q76I76 1423 aa25.24■■□□□ 1.63
HLA-A-206ENST00000479320 EP400Q96L91 3159 aa25.24■■□□□ 1.63
HLA-A-206ENST00000479320 NRKQ7Z2Y5 1582 aa25.24■■□□□ 1.63
HLA-A-206ENST00000479320 ZNF692Q9BU19 519 aaPredicted RBP25.23■■□□□ 1.63
HLA-A-206ENST00000479320 GCP02774 474 aa25.22■■□□□ 1.63
HLA-A-206ENST00000479320 AKAP12Q02952 1782 aa25.22■■□□□ 1.63
HLA-A-206ENST00000479320 SPATA31A5Q5VU36 1347 aa25.21■■□□□ 1.63
HLA-A-206ENST00000479320 SPATA31A7Q8IWB4 1347 aa25.21■■□□□ 1.63
HLA-A-206ENST00000479320 NLRP6P59044 892 aa25.21■■□□□ 1.63
HLA-A-206ENST00000479320 FAM98CQ17RN3 349 aaKnown RBP25.21■■□□□ 1.63
HLA-A-206ENST00000479320 CPDO75976 1380 aa25.2■■□□□ 1.62
HLA-A-206ENST00000479320 CPSF1Q10570 1443 aaKnown RBP25.19■■□□□ 1.62
HLA-A-206ENST00000479320 CCDC125Q86Z20 511 aa25.18■■□□□ 1.62
HLA-A-206ENST00000479320 STRN4Q9NRL3 753 aa25.18■■□□□ 1.62
HLA-A-206ENST00000479320 TTC21BQ7Z4L5 1316 aa25.18■■□□□ 1.62
HLA-A-206ENST00000479320 PIK3C2AO00443 1686 aa25.18■■□□□ 1.62
HLA-A-206ENST00000479320 A0A0G2JS52 829 aa25.17■■□□□ 1.62
HLA-A-206ENST00000479320 MYT1Q01538 1121 aa25.17■■□□□ 1.62
HLA-A-206ENST00000479320 KRT27Q7Z3Y8 459 aa25.17■■□□□ 1.62
HLA-A-206ENST00000479320 PCGF6Q9BYE7 350 aa25.17■■□□□ 1.62
HLA-A-206ENST00000479320 CAMTA1Q9Y6Y1 1673 aa25.16■■□□□ 1.62
HLA-A-206ENST00000479320 EVA1CP58658 441 aa25.15■■□□□ 1.62
HLA-A-206ENST00000479320 KTN1Q86UP2 1357 aaKnown RBP25.15■■□□□ 1.62
HLA-A-206ENST00000479320 SLIT3O75094 1523 aa25.15■■□□□ 1.62
HLA-A-206ENST00000479320 SPATA31A1Q5TZJ5 1347 aa25.15■■□□□ 1.62
HLA-A-206ENST00000479320 LMO7Q8WWI1 1683 aa25.15■■□□□ 1.62
HLA-A-206ENST00000479320 ST20-MTHFSA0A0A6YYL1 179 aa25.14■■□□□ 1.62
HLA-A-206ENST00000479320 TESK2Q96S53 571 aa25.13■■□□□ 1.61
HLA-A-206ENST00000479320 TTC21AQ8NDW8 1320 aa25.13■■□□□ 1.61
HLA-A-206ENST00000479320 TMC1Q8TDI8 760 aa25.12■■□□□ 1.61
HLA-A-206ENST00000479320 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
HLA-A-206ENST00000479320 MON2Q7Z3U7 1717 aa25.11■■□□□ 1.61
HLA-A-206ENST00000479320 SLC12A5Q9H2X9 1139 aa25.11■■□□□ 1.61
HLA-A-206ENST00000479320 CD163L1Q9NR16 1453 aa25.1■■□□□ 1.61
HLA-A-206ENST00000479320 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
HLA-A-206ENST00000479320 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
HLA-A-206ENST00000479320 BLMP54132 1417 aaPredicted RBP25.1■■□□□ 1.61
HLA-A-206ENST00000479320 ZBTB7CA1YPR0 619 aa25.1■■□□□ 1.61
HLA-A-206ENST00000479320 LARP1Q6PKG0 1096 aaKnown RBP25.1■■□□□ 1.61
HLA-A-206ENST00000479320 USP35Q9P2H5 1018 aa25.1■■□□□ 1.61
HLA-A-206ENST00000479320 TIMELESSQ9UNS1 1208 aa25.1■■□□□ 1.61
HLA-A-206ENST00000479320 AATKQ6ZMQ8 1374 aa25.07■■□□□ 1.6
HLA-A-206ENST00000479320 SLC24A1O60721 1099 aa25.07■■□□□ 1.6
HLA-A-206ENST00000479320 HDGFL2Q7Z4V5 671 aaPredicted RBP25.07■■□□□ 1.6
HLA-A-206ENST00000479320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.07■■□□□ 1.6
HLA-A-206ENST00000479320 KCNH5Q8NCM2 988 aa25.07■■□□□ 1.6
HLA-A-206ENST00000479320 COL5A2P05997 1499 aaPredicted RBP25.06■■□□□ 1.6
HLA-A-206ENST00000479320 COL18A1P39060 1754 aa25.05■■□□□ 1.6
HLA-A-206ENST00000479320 FAM182BQ5T319 152 aa25.05■■□□□ 1.6
HLA-A-206ENST00000479320 BARGINQ6ZT62 677 aa25.05■■□□□ 1.6
HLA-A-206ENST00000479320 ZRANB1Q9UGI0 708 aa25.05■■□□□ 1.6
HLA-A-206ENST00000479320 ARHGEF25Q86VW2 580 aa25.04■■□□□ 1.6
HLA-A-206ENST00000479320 TERF2IPQ9NYB0 399 aa25.04■■□□□ 1.6
HLA-A-206ENST00000479320 SOX12O15370 315 aa25.03■■□□□ 1.6
HLA-A-206ENST00000479320 SF3B2Q13435 895 aaKnown RBP25.03■■□□□ 1.6
HLA-A-206ENST00000479320 TCP11L2Q8N4U5 519 aa25.03■■□□□ 1.6
HLA-A-206ENST00000479320 USP47Q96K76 1375 aa25.03■■□□□ 1.6
HLA-A-206ENST00000479320 AXIN2Q9Y2T1 843 aa25.03■■□□□ 1.6
HLA-A-206ENST00000479320 A0A1W2PP64 1363 aa25.02■■□□□ 1.6
HLA-A-206ENST00000479320 USP31Q70CQ4 1352 aa25.02■■□□□ 1.6
HLA-A-206ENST00000479320 NME9Q86XW9 330 aa25.02■■□□□ 1.6
HLA-A-206ENST00000479320 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
HLA-A-206ENST00000479320 THRAP3Q9Y2W1 955 aaKnown RBP25.01■■□□□ 1.59
HLA-A-206ENST00000479320 EDC4Q6P2E9 1401 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms