RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	ABCA3	Q99758	1704 aa		13.27	□□□□□ -0.28
SFI1-222	ENST00000478887	MSH5	O43196	834 aa		13.27	□□□□□ -0.29
SFI1-222	ENST00000478887	MON2	Q7Z3U7	1717 aa		13.27	□□□□□ -0.29
SFI1-222	ENST00000478887	CRYBG1	Q9Y4K1	1723 aa		13.27	□□□□□ -0.29
SFI1-222	ENST00000478887		A0A1W2PP64	1363 aa		13.26	□□□□□ -0.29
SFI1-222	ENST00000478887	MYOM1	P52179	1685 aa		13.26	□□□□□ -0.29
SFI1-222	ENST00000478887	ZNF692	Q9BU19	519 aa	Predicted RBP	13.26	□□□□□ -0.29
SFI1-222	ENST00000478887	KTN1	Q86UP2	1357 aa	Known RBP	13.25	□□□□□ -0.29
SFI1-222	ENST00000478887	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.25	□□□□□ -0.29
SFI1-222	ENST00000478887	NUTM2E	B1AL46	878 aa	Predicted RBP	13.25	□□□□□ -0.29
SFI1-222	ENST00000478887	PAK3	O75914	559 aa	Predicted RBP	13.25	□□□□□ -0.29
SFI1-222	ENST00000478887	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.25	□□□□□ -0.29
SFI1-222	ENST00000478887	SLC12A5	Q9H2X9	1139 aa		13.25	□□□□□ -0.29
SFI1-222	ENST00000478887	EDC4	Q6P2E9	1401 aa	Known RBP	13.24	□□□□□ -0.29
SFI1-222	ENST00000478887	ANKRD36B	Q8N2N9	1353 aa		13.24	□□□□□ -0.29
SFI1-222	ENST00000478887	LMOD2	Q6P5Q4	547 aa		13.24	□□□□□ -0.29
SFI1-222	ENST00000478887	TMC1	Q8TDI8	760 aa		13.24	□□□□□ -0.29
SFI1-222	ENST00000478887	PIK3C2A	O00443	1686 aa		13.24	□□□□□ -0.29
SFI1-222	ENST00000478887	USP19	O94966	1318 aa		13.23	□□□□□ -0.29
SFI1-222	ENST00000478887	TTC21B	Q7Z4L5	1316 aa		13.23	□□□□□ -0.29
SFI1-222	ENST00000478887	TTC21A	Q8NDW8	1320 aa		13.23	□□□□□ -0.29
SFI1-222	ENST00000478887	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.23	□□□□□ -0.29
SFI1-222	ENST00000478887	TERF2IP	Q9NYB0	399 aa		13.23	□□□□□ -0.29
SFI1-222	ENST00000478887	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.23	□□□□□ -0.29
SFI1-222	ENST00000478887	MEX3C	Q5U5Q3	659 aa	Known RBP	13.22	□□□□□ -0.29
SFI1-222	ENST00000478887	MARF1	Q9Y4F3	1742 aa	Known RBP	13.22	□□□□□ -0.29
SFI1-222	ENST00000478887	ADAMTS2	O95450	1211 aa		13.21	□□□□□ -0.29
SFI1-222	ENST00000478887	ABTB2	Q8N961	1025 aa		13.21	□□□□□ -0.29
SFI1-222	ENST00000478887	CABLES1	Q8TDN4	633 aa		13.21	□□□□□ -0.29
SFI1-222	ENST00000478887	SLIT3	O75094	1523 aa		13.21	□□□□□ -0.29
SFI1-222	ENST00000478887	USP54	Q70EL1	1684 aa		13.21	□□□□□ -0.3
SFI1-222	ENST00000478887	RGS17	Q9UGC6	210 aa	Predicted RBP	13.2	□□□□□ -0.3
SFI1-222	ENST00000478887	C11orf95	C9JLR9	678 aa	Predicted RBP	13.19	□□□□□ -0.3
SFI1-222	ENST00000478887	HAP1	P54257	671 aa	Predicted RBP	13.19	□□□□□ -0.3
SFI1-222	ENST00000478887	NUTM2G	Q5VZR2	741 aa		13.19	□□□□□ -0.3
SFI1-222	ENST00000478887	NLRP13	Q86W25	1043 aa		13.19	□□□□□ -0.3
SFI1-222	ENST00000478887	C8orf37	Q96NL8	207 aa		13.19	□□□□□ -0.3
SFI1-222	ENST00000478887	USP31	Q70CQ4	1352 aa		13.19	□□□□□ -0.3
SFI1-222	ENST00000478887	SLIT2	O94813	1529 aa		13.18	□□□□□ -0.3
SFI1-222	ENST00000478887	AFF2	P51816	1311 aa		13.18	□□□□□ -0.3
SFI1-222	ENST00000478887	KIF7	Q2M1P5	1343 aa		13.17	□□□□□ -0.3
SFI1-222	ENST00000478887	OVOS2	A0A0J9YW53	1432 aa		13.17	□□□□□ -0.3
SFI1-222	ENST00000478887	OVOS2	Q6IE36	1432 aa		13.17	□□□□□ -0.3
SFI1-222	ENST00000478887	NLRP6	P59044	892 aa		13.17	□□□□□ -0.3
SFI1-222	ENST00000478887	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.17	□□□□□ -0.3
SFI1-222	ENST00000478887	CPD	O75976	1380 aa		13.17	□□□□□ -0.3
SFI1-222	ENST00000478887	PLEKHG5	O94827	1062 aa		13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	ZEB1	P37275	1124 aa	Predicted RBP	13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	ZNF772	Q68DY9	489 aa	Predicted RBP	13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	NME9	Q86XW9	330 aa		13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	NGLY1	Q96IV0	654 aa		13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	BCL9L	Q86UU0	1499 aa		13.16	□□□□□ -0.3
SFI1-222	ENST00000478887	PLCH1	Q4KWH8	1693 aa		13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	NSD3	Q9BZ95	1437 aa		13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	COL14A1	Q05707	1796 aa	Known RBP	13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	NFAT5	O94916	1531 aa		13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	GC	P02774	474 aa		13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	KIAA0232	Q92628	1395 aa		13.15	□□□□□ -0.3
SFI1-222	ENST00000478887	NWD2	Q9ULI1	1742 aa		13.14	□□□□□ -0.31
SFI1-222	ENST00000478887	POLR3GL	Q9BT43	218 aa		13.14	□□□□□ -0.31
SFI1-222	ENST00000478887	CCDC7	Q96M83	1385 aa		13.14	□□□□□ -0.31
SFI1-222	ENST00000478887	ATRN	O75882	1429 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	LMO7	Q8WWI1	1683 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	POTEA	Q6S8J7	498 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	CARD14	Q9BXL6	1004 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	PRDM11	Q9NQV5	511 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	NRAP	Q86VF7	1730 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	WASHC2A	Q641Q2	1341 aa		13.13	□□□□□ -0.31
SFI1-222	ENST00000478887	FAM83G	A6ND36	823 aa		13.12	□□□□□ -0.31
SFI1-222	ENST00000478887	KCNH5	Q8NCM2	988 aa		13.12	□□□□□ -0.31
SFI1-222	ENST00000478887	ZRANB1	Q9UGI0	708 aa		13.12	□□□□□ -0.31
SFI1-222	ENST00000478887	USP21	Q9UK80	565 aa		13.12	□□□□□ -0.31
SFI1-222	ENST00000478887	ABCC6	O95255	1503 aa		13.12	□□□□□ -0.31
SFI1-222	ENST00000478887	ZC3H6	P61129	1189 aa	Known RBP	13.11	□□□□□ -0.31
SFI1-222	ENST00000478887	UNC5CL	Q8IV45	518 aa		13.11	□□□□□ -0.31
SFI1-222	ENST00000478887	KIF20B	Q96Q89	1820 aa		13.11	□□□□□ -0.31
SFI1-222	ENST00000478887	AATK	Q6ZMQ8	1374 aa		13.1	□□□□□ -0.31
SFI1-222	ENST00000478887	FYB1	O15117	783 aa		13.1	□□□□□ -0.31
SFI1-222	ENST00000478887	TRPC5	Q9UL62	973 aa	Predicted RBP	13.1	□□□□□ -0.31
SFI1-222	ENST00000478887	CGNL1	Q0VF96	1302 aa		13.1	□□□□□ -0.31
SFI1-222	ENST00000478887	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.1	□□□□□ -0.31
SFI1-222	ENST00000478887	CHRNA2	Q15822	529 aa		13.09	□□□□□ -0.31
SFI1-222	ENST00000478887	ARHGEF25	Q86VW2	580 aa		13.09	□□□□□ -0.31
SFI1-222	ENST00000478887	COG3	Q96JB2	828 aa		13.09	□□□□□ -0.31
SFI1-222	ENST00000478887	PANK3	Q9H999	370 aa		13.09	□□□□□ -0.31
SFI1-222	ENST00000478887	BTG4	Q9NY30	223 aa		13.09	□□□□□ -0.31
SFI1-222	ENST00000478887	CAMTA1	Q9Y6Y1	1673 aa		13.08	□□□□□ -0.31
SFI1-222	ENST00000478887	ILDR2	Q71H61	639 aa		13.08	□□□□□ -0.32
SFI1-222	ENST00000478887	GGNBP2	Q9H3C7	697 aa		13.08	□□□□□ -0.32
SFI1-222	ENST00000478887	QTRT2	Q9H974	415 aa	Known RBP	13.08	□□□□□ -0.32
SFI1-222	ENST00000478887	NSD2	O96028	1365 aa		13.07	□□□□□ -0.32
SFI1-222	ENST00000478887	COL18A1	P39060	1754 aa		13.07	□□□□□ -0.32
SFI1-222	ENST00000478887	VPS72	Q15906	364 aa		13.07	□□□□□ -0.32
SFI1-222	ENST00000478887	COL5A2	P05997	1499 aa	Predicted RBP	13.07	□□□□□ -0.32
SFI1-222	ENST00000478887	GLI3	P10071	1580 aa		13.07	□□□□□ -0.32
SFI1-222	ENST00000478887	SOX12	O15370	315 aa		13.06	□□□□□ -0.32
SFI1-222	ENST00000478887	RBM6	P78332	1123 aa	Known RBP	13.06	□□□□□ -0.32
SFI1-222	ENST00000478887	ANKRD26	Q9UPS8	1709 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms