RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-209ENST00000478424 EP400Q96L91 3159 aa35.88■■■■□ 3.34
ARF1-209ENST00000478424 BRWD3Q6RI45 1802 aa35.87■■■■□ 3.33
ARF1-209ENST00000478424 NUTM2GQ5VZR2 741 aa35.86■■■■□ 3.33
ARF1-209ENST00000478424 PRDM11Q9NQV5 511 aa35.86■■■■□ 3.33
ARF1-209ENST00000478424 COL14A1Q05707 1796 aaKnown RBP35.86■■■■□ 3.33
ARF1-209ENST00000478424 CENPJQ9HC77 1338 aaPredicted RBP35.84■■■■□ 3.33
ARF1-209ENST00000478424 NRAPQ86VF7 1730 aa35.84■■■■□ 3.33
ARF1-209ENST00000478424 SRPK2P78362 688 aaKnown RBP35.84■■■■□ 3.33
ARF1-209ENST00000478424 TOPAZ1Q8N9V7 1692 aa35.84■■■■□ 3.33
ARF1-209ENST00000478424 CCDC125Q86Z20 511 aa35.83■■■■□ 3.33
ARF1-209ENST00000478424 CCDC61Q9Y6R9 512 aa35.83■■■■□ 3.33
ARF1-209ENST00000478424 ACEP12821 1306 aa35.83■■■■□ 3.33
ARF1-209ENST00000478424 NEUROD1Q13562 356 aa35.82■■■■□ 3.32
ARF1-209ENST00000478424 L3MBTL2Q969R5 705 aa35.82■■■■□ 3.32
ARF1-209ENST00000478424 SIN3AQ96ST3 1273 aa35.82■■■■□ 3.32
ARF1-209ENST00000478424 CRYBG1Q9Y4K1 1723 aa35.81■■■■□ 3.32
ARF1-209ENST00000478424 FAM98CQ17RN3 349 aaKnown RBP35.81■■■■□ 3.32
ARF1-209ENST00000478424 NBPF8Q3BBV2 869 aa35.78■■■■□ 3.32
ARF1-209ENST00000478424 KRT27Q7Z3Y8 459 aa35.78■■■■□ 3.32
ARF1-209ENST00000478424 POLR3AO14802 1390 aaPredicted RBP35.77■■■■□ 3.32
ARF1-209ENST00000478424 KIAA0232Q92628 1395 aa35.77■■■■□ 3.32
ARF1-209ENST00000478424 BLMP54132 1417 aaPredicted RBP35.77■■■■□ 3.32
ARF1-209ENST00000478424 CABP2Q9NPB3 220 aa35.77■■■■□ 3.32
ARF1-209ENST00000478424 QRICH2Q9H0J4 1663 aa35.77■■■■□ 3.32
ARF1-209ENST00000478424 SF3B2Q13435 895 aaKnown RBP35.76■■■■□ 3.32
ARF1-209ENST00000478424 CHRNA2Q15822 529 aa35.76■■■■□ 3.32
ARF1-209ENST00000478424 ZC3H6P61129 1189 aaKnown RBP35.75■■■■□ 3.31
ARF1-209ENST00000478424 ZRANB1Q9UGI0 708 aa35.75■■■■□ 3.31
ARF1-209ENST00000478424 PHRF1Q9P1Y6 1649 aaKnown RBP35.75■■■■□ 3.31
ARF1-209ENST00000478424 PPIP5K1Q6PFW1 1433 aa35.74■■■■□ 3.31
ARF1-209ENST00000478424 PLEKHG3A1L390 1219 aa35.73■■■■□ 3.31
ARF1-209ENST00000478424 ONECUT3O60422 494 aaPredicted RBP35.72■■■■□ 3.31
ARF1-209ENST00000478424 ABTB2Q8N961 1025 aa35.72■■■■□ 3.31
ARF1-209ENST00000478424 STRN4Q9NRL3 753 aa35.72■■■■□ 3.31
ARF1-209ENST00000478424 DEFB132Q7Z7B7 95 aa35.7■■■■□ 3.31
ARF1-209ENST00000478424 SPATA31A5Q5VU36 1347 aa35.69■■■■□ 3.3
ARF1-209ENST00000478424 SPATA31A7Q8IWB4 1347 aa35.69■■■■□ 3.3
ARF1-209ENST00000478424 ROCK2O75116 1388 aaKnown RBP35.67■■■■□ 3.3
ARF1-209ENST00000478424 TRPM1Q7Z4N2 1603 aa35.66■■■■□ 3.3
ARF1-209ENST00000478424 NRKQ7Z2Y5 1582 aa35.64■■■■□ 3.3
ARF1-209ENST00000478424 FAM182BQ5T319 152 aa35.62■■■■□ 3.29
ARF1-209ENST00000478424 CABP1Q9NZU7 370 aa35.61■■■■□ 3.29
ARF1-209ENST00000478424 USP35Q9P2H5 1018 aa35.61■■■■□ 3.29
ARF1-209ENST00000478424 EVC2Q86UK5 1308 aa35.6■■■■□ 3.29
ARF1-209ENST00000478424 ZBTB7CA1YPR0 619 aa35.6■■■■□ 3.29
ARF1-209ENST00000478424 EVA1CP58658 441 aa35.6■■■■□ 3.29
ARF1-209ENST00000478424 NLRP13Q86W25 1043 aa35.58■■■■□ 3.29
ARF1-209ENST00000478424 SPATA31A1Q5TZJ5 1347 aa35.57■■■■□ 3.29
ARF1-209ENST00000478424 USP19O94966 1318 aa35.57■■■■□ 3.28
ARF1-209ENST00000478424 THSD7AQ9UPZ6 1657 aa35.56■■■■□ 3.28
ARF1-209ENST00000478424 USP6P35125 1406 aa35.54■■■■□ 3.28
ARF1-209ENST00000478424 SSH2Q76I76 1423 aa35.54■■■■□ 3.28
ARF1-209ENST00000478424 BAG6P46379 1132 aa35.53■■■■□ 3.28
ARF1-209ENST00000478424 GCP02774 474 aa35.51■■■■□ 3.28
ARF1-209ENST00000478424 NLRP6P59044 892 aa35.51■■■■□ 3.28
ARF1-209ENST00000478424 CPDO75976 1380 aa35.51■■■■□ 3.27
ARF1-209ENST00000478424 CAMTA1Q9Y6Y1 1673 aa35.49■■■■□ 3.27
ARF1-209ENST00000478424 LARP1Q6PKG0 1096 aaKnown RBP35.49■■■■□ 3.27
ARF1-209ENST00000478424 BRD4O60885 1362 aaPredicted RBP35.49■■■■□ 3.27
ARF1-209ENST00000478424 SRCAPQ6ZRS2 3230 aa35.46■■■■□ 3.27
ARF1-209ENST00000478424 LMO7Q8WWI1 1683 aa35.46■■■■□ 3.27
ARF1-209ENST00000478424 RGPD1P0DJD0 1748 aa35.45■■■■□ 3.27
ARF1-209ENST00000478424 TONSLQ96HA7 1378 aa35.43■■■■□ 3.26
ARF1-209ENST00000478424 EN1Q05925 392 aaPredicted RBP35.41■■■■□ 3.26
ARF1-209ENST00000478424 TCP11L2Q8N4U5 519 aa35.41■■■■□ 3.26
ARF1-209ENST00000478424 CARD11Q9BXL7 1154 aa35.41■■■■□ 3.26
ARF1-209ENST00000478424 PIK3C2AO00443 1686 aa35.4■■■■□ 3.26
ARF1-209ENST00000478424 SOX12O15370 315 aa35.4■■■■□ 3.26
ARF1-209ENST00000478424 PDE3BQ13370 1112 aa35.39■■■■□ 3.26
ARF1-209ENST00000478424 BARGINQ6ZT62 677 aa35.39■■■■□ 3.26
ARF1-209ENST00000478424 COL5A2P05997 1499 aaPredicted RBP35.39■■■■□ 3.26
ARF1-209ENST00000478424 SLIT3O75094 1523 aa35.38■■■■□ 3.25
ARF1-209ENST00000478424 PSDA5PKW4 1024 aaPredicted RBP35.37■■■■□ 3.25
ARF1-209ENST00000478424 TRIM37O94972 964 aa35.37■■■■□ 3.25
ARF1-209ENST00000478424 FAM196AQ6ZSG2 479 aa35.37■■■■□ 3.25
ARF1-209ENST00000478424 TTC21BQ7Z4L5 1316 aa35.35■■■■□ 3.25
ARF1-209ENST00000478424 ZNF692Q9BU19 519 aaPredicted RBP35.34■■■■□ 3.25
ARF1-209ENST00000478424 TNS1Q9HBL0 1735 aaKnown RBP35.34■■■■□ 3.25
ARF1-209ENST00000478424 AKAP12Q02952 1782 aa35.33■■■■□ 3.25
ARF1-209ENST00000478424 KTN1Q86UP2 1357 aaKnown RBP35.33■■■■□ 3.25
ARF1-209ENST00000478424 AATKQ6ZMQ8 1374 aa35.32■■■■□ 3.24
ARF1-209ENST00000478424 CRB1P82279 1406 aa35.31■■■■□ 3.24
ARF1-209ENST00000478424 THRAP3Q9Y2W1 955 aaKnown RBP35.3■■■■□ 3.24
ARF1-209ENST00000478424 TOM1L2Q6ZVM7 507 aa35.29■■■■□ 3.24
ARF1-209ENST00000478424 TTC21AQ8NDW8 1320 aa35.29■■■■□ 3.24
ARF1-209ENST00000478424 TMC1Q8TDI8 760 aa35.28■■■■□ 3.24
ARF1-209ENST00000478424 CPSF1Q10570 1443 aaKnown RBP35.27■■■■□ 3.24
ARF1-209ENST00000478424 APBA3O96018 575 aa35.27■■■■□ 3.24
ARF1-209ENST00000478424 EZH2Q15910 746 aaKnown RBP35.27■■■■□ 3.24
ARF1-209ENST00000478424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.27■■■■□ 3.247e-7■■□□□ 13.6
ARF1-209ENST00000478424 SBNO2Q9Y2G9 1366 aa35.26■■■■□ 3.24
ARF1-209ENST00000478424 DISP2A7MBM2 1401 aa35.26■■■■□ 3.24
ARF1-209ENST00000478424 KCNH5Q8NCM2 988 aa35.26■■■■□ 3.24
ARF1-209ENST00000478424 CSB-PGBD3P0DP91 1061 aa35.23■■■■□ 3.23
ARF1-209ENST00000478424 AXIN2Q9Y2T1 843 aa35.22■■■■□ 3.23
ARF1-209ENST00000478424 PARP4Q9UKK3 1724 aaKnown RBP35.21■■■■□ 3.23
ARF1-209ENST00000478424 R3HDM1Q15032 1099 aaKnown RBP35.21■■■■□ 3.23
ARF1-209ENST00000478424 MON2Q7Z3U7 1717 aa35.2■■■■□ 3.23
ARF1-209ENST00000478424 COL18A1P39060 1754 aa35.2■■■■□ 3.23
ARF1-209ENST00000478424 ARHGEF25Q86VW2 580 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms