RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 GLI3P10071 1580 aa16.72■□□□□ 0.27
SKI-202ENST00000478223 ACEP12821 1306 aa16.72■□□□□ 0.27
SKI-202ENST00000478223 SLIT2O94813 1529 aa16.72■□□□□ 0.27
SKI-202ENST00000478223 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
SKI-202ENST00000478223 RGS12O14924 1447 aa16.71■□□□□ 0.27
SKI-202ENST00000478223 ATRNO75882 1429 aa16.71■□□□□ 0.27
SKI-202ENST00000478223 FNBP4Q8N3X1 1017 aaPredicted RBP16.71■□□□□ 0.27
SKI-202ENST00000478223 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
SKI-202ENST00000478223 RGPD5Q99666 1765 aa16.7■□□□□ 0.26
SKI-202ENST00000478223 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
SKI-202ENST00000478223 PLEKHG3A1L390 1219 aa16.7■□□□□ 0.26
SKI-202ENST00000478223 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
SKI-202ENST00000478223 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
SKI-202ENST00000478223 USP21Q9UK80 565 aa16.7■□□□□ 0.26
SKI-202ENST00000478223 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
SKI-202ENST00000478223 RXRBP28702 533 aa16.68■□□□□ 0.26
SKI-202ENST00000478223 SBNO2Q9Y2G9 1366 aa16.67■□□□□ 0.26
SKI-202ENST00000478223 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
SKI-202ENST00000478223 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
SKI-202ENST00000478223 USP6P35125 1406 aa16.65■□□□□ 0.26
SKI-202ENST00000478223 HAP1P54257 671 aaPredicted RBP16.65■□□□□ 0.26
SKI-202ENST00000478223 RBM6P78332 1123 aaKnown RBP16.65■□□□□ 0.26
SKI-202ENST00000478223 NUTM2GQ5VZR2 741 aa16.65■□□□□ 0.26
SKI-202ENST00000478223 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
SKI-202ENST00000478223 USP54Q70EL1 1684 aa16.65■□□□□ 0.26
SKI-202ENST00000478223 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
SKI-202ENST00000478223 EP400Q96L91 3159 aa16.64■□□□□ 0.25
SKI-202ENST00000478223 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
SKI-202ENST00000478223 LTN1O94822 1766 aa16.63■□□□□ 0.25
SKI-202ENST00000478223 COL18A1P39060 1754 aa16.63■□□□□ 0.25
SKI-202ENST00000478223 MYOM1P52179 1685 aa16.62■□□□□ 0.25
SKI-202ENST00000478223 CD163L1Q9NR16 1453 aa16.62■□□□□ 0.25
SKI-202ENST00000478223 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
SKI-202ENST00000478223 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
SKI-202ENST00000478223 SLIT3O75094 1523 aa16.61■□□□□ 0.25
SKI-202ENST00000478223 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
SKI-202ENST00000478223 WNK3Q9BYP7 1800 aa16.6■□□□□ 0.25
SKI-202ENST00000478223 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
SKI-202ENST00000478223 TESK2Q96S53 571 aa16.59■□□□□ 0.25
SKI-202ENST00000478223 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
SKI-202ENST00000478223 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
SKI-202ENST00000478223 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
SKI-202ENST00000478223 ABTB2Q8N961 1025 aa16.58■□□□□ 0.24
SKI-202ENST00000478223 GJD4Q96KN9 370 aaPredicted RBP16.58■□□□□ 0.24
SKI-202ENST00000478223 USP19O94966 1318 aa16.58■□□□□ 0.24
SKI-202ENST00000478223 USP47Q96K76 1375 aa16.58■□□□□ 0.24
SKI-202ENST00000478223 THSD7AQ9UPZ6 1657 aa16.57■□□□□ 0.24
SKI-202ENST00000478223 CAMTA1Q9Y6Y1 1673 aa16.57■□□□□ 0.24
SKI-202ENST00000478223 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
SKI-202ENST00000478223 BRD4O60885 1362 aaPredicted RBP16.56■□□□□ 0.24
SKI-202ENST00000478223 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
SKI-202ENST00000478223 CCER1Q8TC90 406 aaPredicted RBP16.56■□□□□ 0.24
SKI-202ENST00000478223 BTG4Q9NY30 223 aa16.56■□□□□ 0.24
SKI-202ENST00000478223 ZC3H6P61129 1189 aaKnown RBP16.55■□□□□ 0.24
SKI-202ENST00000478223 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
SKI-202ENST00000478223 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
SKI-202ENST00000478223 VPS72Q15906 364 aa16.54■□□□□ 0.24
SKI-202ENST00000478223 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
SKI-202ENST00000478223 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
SKI-202ENST00000478223 NFAT5O94916 1531 aa16.54■□□□□ 0.24
SKI-202ENST00000478223 SLC12A5Q9H2X9 1139 aa16.52■□□□□ 0.24
SKI-202ENST00000478223 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
SKI-202ENST00000478223 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
SKI-202ENST00000478223 CPDO75976 1380 aa16.51■□□□□ 0.23
SKI-202ENST00000478223 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
SKI-202ENST00000478223 TMC1Q8TDI8 760 aa16.51■□□□□ 0.23
SKI-202ENST00000478223 GCP02774 474 aa16.5■□□□□ 0.23
SKI-202ENST00000478223 NLRP6P59044 892 aa16.5■□□□□ 0.23
SKI-202ENST00000478223 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
SKI-202ENST00000478223 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
SKI-202ENST00000478223 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
SKI-202ENST00000478223 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
SKI-202ENST00000478223 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
SKI-202ENST00000478223 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
SKI-202ENST00000478223 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
SKI-202ENST00000478223 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
SKI-202ENST00000478223 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
SKI-202ENST00000478223 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
SKI-202ENST00000478223 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
SKI-202ENST00000478223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■□□□□ 9.8
SKI-202ENST00000478223 RGPD1P0DJD0 1748 aa16.46■□□□□ 0.23
SKI-202ENST00000478223 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
SKI-202ENST00000478223 NME9Q86XW9 330 aa16.46■□□□□ 0.23
SKI-202ENST00000478223 SEPT12Q8IYM1 358 aa16.46■□□□□ 0.23
SKI-202ENST00000478223 PUS7Q96PZ0 661 aaKnown RBP16.46■□□□□ 0.23
SKI-202ENST00000478223 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
SKI-202ENST00000478223 SBF2Q86WG5 1849 aa16.46■□□□□ 0.23
SKI-202ENST00000478223 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
SKI-202ENST00000478223 ONECUT3O60422 494 aaPredicted RBP16.45■□□□□ 0.22
SKI-202ENST00000478223 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
SKI-202ENST00000478223 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
SKI-202ENST00000478223 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
SKI-202ENST00000478223 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
SKI-202ENST00000478223 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
SKI-202ENST00000478223 SOX12O15370 315 aa16.44■□□□□ 0.22
SKI-202ENST00000478223 ANKRD26Q9UPS8 1709 aa16.44■□□□□ 0.22
SKI-202ENST00000478223 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
SKI-202ENST00000478223 TMF1P82094 1093 aa16.43■□□□□ 0.22
SKI-202ENST00000478223 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
SKI-202ENST00000478223 HDGFL2Q7Z4V5 671 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms