RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 USP47Q96K76 1375 aa18.42■□□□□ 0.54
COL1A2-207ENST00000478215 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
COL1A2-207ENST00000478215 CABLES1Q8TDN4 633 aa18.42■□□□□ 0.54
COL1A2-207ENST00000478215 AFF2P51816 1311 aa18.42■□□□□ 0.54
COL1A2-207ENST00000478215 ST20-MTHFSA0A0A6YYL1 179 aa18.41■□□□□ 0.54
COL1A2-207ENST00000478215 TESK2Q96S53 571 aa18.4■□□□□ 0.54
COL1A2-207ENST00000478215 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
COL1A2-207ENST00000478215 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
COL1A2-207ENST00000478215 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
COL1A2-207ENST00000478215 MYOM1P52179 1685 aa18.38■□□□□ 0.53
COL1A2-207ENST00000478215 COL14A1Q05707 1796 aaKnown RBP18.38■□□□□ 0.53
COL1A2-207ENST00000478215 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
COL1A2-207ENST00000478215 USP6P35125 1406 aa18.38■□□□□ 0.53
COL1A2-207ENST00000478215 NGLY1Q96IV0 654 aa18.37■□□□□ 0.53
COL1A2-207ENST00000478215 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
COL1A2-207ENST00000478215 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
COL1A2-207ENST00000478215 CD163L1Q9NR16 1453 aa18.36■□□□□ 0.53
COL1A2-207ENST00000478215 SSH2Q76I76 1423 aa18.35■□□□□ 0.53
COL1A2-207ENST00000478215 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
COL1A2-207ENST00000478215 SLIT2O94813 1529 aa18.34■□□□□ 0.53
COL1A2-207ENST00000478215 BCL9LQ86UU0 1499 aa18.34■□□□□ 0.53
COL1A2-207ENST00000478215 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
COL1A2-207ENST00000478215 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
COL1A2-207ENST00000478215 NUTM2GQ5VZR2 741 aa18.34■□□□□ 0.53
COL1A2-207ENST00000478215 BRWD3Q6RI45 1802 aa18.34■□□□□ 0.53
COL1A2-207ENST00000478215 FNBP4Q8N3X1 1017 aaPredicted RBP18.33■□□□□ 0.52
COL1A2-207ENST00000478215 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
COL1A2-207ENST00000478215 USP21Q9UK80 565 aa18.31■□□□□ 0.52
COL1A2-207ENST00000478215 LTN1O94822 1766 aa18.31■□□□□ 0.52
COL1A2-207ENST00000478215 ATRNO75882 1429 aa18.31■□□□□ 0.52
COL1A2-207ENST00000478215 ABTB2Q8N961 1025 aa18.3■□□□□ 0.52
COL1A2-207ENST00000478215 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
COL1A2-207ENST00000478215 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
COL1A2-207ENST00000478215 GLI3P10071 1580 aa18.3■□□□□ 0.52
COL1A2-207ENST00000478215 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
COL1A2-207ENST00000478215 SLIT3O75094 1523 aa18.29■□□□□ 0.52
COL1A2-207ENST00000478215 LMO7Q8WWI1 1683 aa18.29■□□□□ 0.52
COL1A2-207ENST00000478215 SOCS7O14512 581 aa18.29■□□□□ 0.52
COL1A2-207ENST00000478215 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
COL1A2-207ENST00000478215 COL18A1P39060 1754 aa18.29■□□□□ 0.52
COL1A2-207ENST00000478215 USP19O94966 1318 aa18.28■□□□□ 0.52
COL1A2-207ENST00000478215 TMC1Q8TDI8 760 aa18.28■□□□□ 0.52
COL1A2-207ENST00000478215 PUS7Q96PZ0 661 aaKnown RBP18.28■□□□□ 0.52
COL1A2-207ENST00000478215 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
COL1A2-207ENST00000478215 FAM83GA6ND36 823 aa18.27■□□□□ 0.52
COL1A2-207ENST00000478215 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
COL1A2-207ENST00000478215 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
COL1A2-207ENST00000478215 RXRBP28702 533 aa18.26■□□□□ 0.51
COL1A2-207ENST00000478215 TMF1P82094 1093 aa18.26■□□□□ 0.51
COL1A2-207ENST00000478215 CDK12Q9NYV4 1490 aaPredicted RBP18.26■□□□□ 0.51
COL1A2-207ENST00000478215 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
COL1A2-207ENST00000478215 KIAA0232Q92628 1395 aa18.25■□□□□ 0.51
COL1A2-207ENST00000478215 RGS12O14924 1447 aa18.24■□□□□ 0.51
COL1A2-207ENST00000478215 UNC5CLQ8IV45 518 aa18.24■□□□□ 0.51
COL1A2-207ENST00000478215 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
COL1A2-207ENST00000478215 EP400Q96L91 3159 aa18.23■□□□□ 0.51
COL1A2-207ENST00000478215 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
COL1A2-207ENST00000478215 HSPA5P11021 654 aaKnown RBP18.23■□□□□ 0.51
COL1A2-207ENST00000478215 ZC3H6P61129 1189 aaKnown RBP18.23■□□□□ 0.51
COL1A2-207ENST00000478215 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
COL1A2-207ENST00000478215 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
COL1A2-207ENST00000478215 NFAT5O94916 1531 aa18.23■□□□□ 0.51
COL1A2-207ENST00000478215 EDC4Q6P2E9 1401 aaKnown RBP18.23■□□□□ 0.51
COL1A2-207ENST00000478215 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
COL1A2-207ENST00000478215 NLRP6P59044 892 aa18.22■□□□□ 0.51
COL1A2-207ENST00000478215 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
COL1A2-207ENST00000478215 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
COL1A2-207ENST00000478215 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL1A2-207ENST00000478215 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
COL1A2-207ENST00000478215 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
COL1A2-207ENST00000478215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL1A2-207ENST00000478215 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
COL1A2-207ENST00000478215 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
COL1A2-207ENST00000478215 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
COL1A2-207ENST00000478215 WNK3Q9BYP7 1800 aa18.21■□□□□ 0.51
COL1A2-207ENST00000478215 GCP02774 474 aa18.2■□□□□ 0.5
COL1A2-207ENST00000478215 CPDO75976 1380 aa18.19■□□□□ 0.5
COL1A2-207ENST00000478215 ANKRD36BQ8N2N9 1353 aa18.19■□□□□ 0.5
COL1A2-207ENST00000478215 NME9Q86XW9 330 aa18.18■□□□□ 0.5
COL1A2-207ENST00000478215 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
COL1A2-207ENST00000478215 MAP2P11137 1827 aaKnown RBP18.18■□□□□ 0.5
COL1A2-207ENST00000478215 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
COL1A2-207ENST00000478215 VPS72Q15906 364 aa18.17■□□□□ 0.5
COL1A2-207ENST00000478215 RGPD2P0DJD1 1756 aa18.17■□□□□ 0.5
COL1A2-207ENST00000478215 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
COL1A2-207ENST00000478215 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
COL1A2-207ENST00000478215 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
COL1A2-207ENST00000478215 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
COL1A2-207ENST00000478215 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
COL1A2-207ENST00000478215 SOX12O15370 315 aa18.14■□□□□ 0.49
COL1A2-207ENST00000478215 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
COL1A2-207ENST00000478215 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
COL1A2-207ENST00000478215 COL5A2P05997 1499 aaPredicted RBP18.13■□□□□ 0.49
COL1A2-207ENST00000478215 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
COL1A2-207ENST00000478215 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
COL1A2-207ENST00000478215 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
COL1A2-207ENST00000478215 AATKQ6ZMQ8 1374 aa18.11■□□□□ 0.49
COL1A2-207ENST00000478215 ABCC6O95255 1503 aa18.11■□□□□ 0.49
COL1A2-207ENST00000478215 SPATA31A5Q5VU36 1347 aa18.1■□□□□ 0.49
COL1A2-207ENST00000478215 SPATA31A7Q8IWB4 1347 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms