RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
LMNA-214ENST00000478063 MYBBP1AQ9BQG0 1328 aaKnown RBP18.09■□□□□ 0.49
LMNA-214ENST00000478063 SSH2Q76I76 1423 aa18.08■□□□□ 0.49
LMNA-214ENST00000478063 TTC21BQ7Z4L5 1316 aa18.08■□□□□ 0.49
LMNA-214ENST00000478063 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
LMNA-214ENST00000478063 MORC1Q86VD1 984 aa18.08■□□□□ 0.48
LMNA-214ENST00000478063 GGNBP2Q9H3C7 697 aa18.08■□□□□ 0.48
LMNA-214ENST00000478063 NHSL1Q5SYE7 1610 aa18.08■□□□□ 0.48
LMNA-214ENST00000478063 TTC21AQ8NDW8 1320 aa18.07■□□□□ 0.48
LMNA-214ENST00000478063 FYB1O15117 783 aa18.07■□□□□ 0.48
LMNA-214ENST00000478063 PSME1Q06323 249 aa18.07■□□□□ 0.48
LMNA-214ENST00000478063 NME9Q86XW9 330 aa18.07■□□□□ 0.48
LMNA-214ENST00000478063 SLAIN2Q9P270 581 aa18.07■□□□□ 0.48
LMNA-214ENST00000478063 BRD4O60885 1362 aaPredicted RBP18.06■□□□□ 0.48
LMNA-214ENST00000478063 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
LMNA-214ENST00000478063 FOXO3O43524 673 aa18.06■□□□□ 0.48
LMNA-214ENST00000478063 ALS2Q96Q42 1657 aa18.06■□□□□ 0.48
LMNA-214ENST00000478063 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
LMNA-214ENST00000478063 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
LMNA-214ENST00000478063 TNNT2P45379 298 aaPredicted RBP18.03■□□□□ 0.48
LMNA-214ENST00000478063 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
LMNA-214ENST00000478063 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
LMNA-214ENST00000478063 OVOS2A0A0J9YW53 1432 aa18.02■□□□□ 0.48
LMNA-214ENST00000478063 PPP2R1AP30153 589 aa18.02■□□□□ 0.48
LMNA-214ENST00000478063 OVOS2Q6IE36 1432 aa18.02■□□□□ 0.48
LMNA-214ENST00000478063 KRT28Q7Z3Y7 464 aa18.02■□□□□ 0.48
LMNA-214ENST00000478063 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
LMNA-214ENST00000478063 COG3Q96JB2 828 aa18.02■□□□□ 0.48
LMNA-214ENST00000478063 IQSEC2Q5JU85 1478 aa18.01■□□□□ 0.47
LMNA-214ENST00000478063 PXDNQ92626 1479 aa18.01■□□□□ 0.47
LMNA-214ENST00000478063 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
LMNA-214ENST00000478063 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
LMNA-214ENST00000478063 LTN1O94822 1766 aa18■□□□□ 0.47
LMNA-214ENST00000478063 CCDC184Q52MB2 194 aa18■□□□□ 0.47
LMNA-214ENST00000478063 DDX17Q92841 729 aaKnown RBP18■□□□□ 0.47
LMNA-214ENST00000478063 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
LMNA-214ENST00000478063 ABTB2Q8N961 1025 aa17.98■□□□□ 0.47
LMNA-214ENST00000478063 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
LMNA-214ENST00000478063 NLRP6P59044 892 aa17.97■□□□□ 0.47
LMNA-214ENST00000478063 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
LMNA-214ENST00000478063 SBNO1A3KN83 1393 aa17.96■□□□□ 0.47
LMNA-214ENST00000478063 CRYBG1Q9Y4K1 1723 aa17.96■□□□□ 0.47
LMNA-214ENST00000478063 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
LMNA-214ENST00000478063 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
LMNA-214ENST00000478063 TNS3Q68CZ2 1445 aa17.96■□□□□ 0.47
LMNA-214ENST00000478063 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
LMNA-214ENST00000478063 TOM1O60784 492 aa17.95■□□□□ 0.46
LMNA-214ENST00000478063 LMOD2Q6P5Q4 547 aa17.95■□□□□ 0.46
LMNA-214ENST00000478063 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
LMNA-214ENST00000478063 CERKQ8TCT0 537 aa17.94■□□□□ 0.46
LMNA-214ENST00000478063 ABCA3Q99758 1704 aa17.94■□□□□ 0.46
LMNA-214ENST00000478063 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
LMNA-214ENST00000478063 SLIT3O75094 1523 aa17.93■□□□□ 0.46
LMNA-214ENST00000478063 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
LMNA-214ENST00000478063 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
LMNA-214ENST00000478063 SOX12O15370 315 aa17.92■□□□□ 0.46
LMNA-214ENST00000478063 MTHFSP49914 203 aa17.92■□□□□ 0.46
LMNA-214ENST00000478063 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
LMNA-214ENST00000478063 MED1Q15648 1581 aaPredicted RBP17.91■□□□□ 0.46
LMNA-214ENST00000478063 SMG6Q86US8 1419 aaKnown RBP17.91■□□□□ 0.46
LMNA-214ENST00000478063 NFAT5O94916 1531 aa17.91■□□□□ 0.46
LMNA-214ENST00000478063 SPATA31A3Q5VYP0 1347 aa17.91■□□□□ 0.46
LMNA-214ENST00000478063 FBLN1P23142 703 aa17.9■□□□□ 0.46
LMNA-214ENST00000478063 PIP4K2BP78356 416 aa17.9■□□□□ 0.46
LMNA-214ENST00000478063 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
LMNA-214ENST00000478063 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
LMNA-214ENST00000478063 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
LMNA-214ENST00000478063 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
LMNA-214ENST00000478063 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
LMNA-214ENST00000478063 COL16A1Q07092 1604 aaPredicted RBP17.89■□□□□ 0.45
LMNA-214ENST00000478063 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
LMNA-214ENST00000478063 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
LMNA-214ENST00000478063 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
LMNA-214ENST00000478063 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
LMNA-214ENST00000478063 USP19O94966 1318 aa17.88■□□□□ 0.45
LMNA-214ENST00000478063 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
LMNA-214ENST00000478063 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
LMNA-214ENST00000478063 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
LMNA-214ENST00000478063 PNISRQ8TF01 805 aaKnown RBP17.86■□□□□ 0.45
LMNA-214ENST00000478063 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
LMNA-214ENST00000478063 COL22A1Q8NFW1 1626 aaPredicted RBP17.85■□□□□ 0.45
LMNA-214ENST00000478063 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
LMNA-214ENST00000478063 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
LMNA-214ENST00000478063 PNPLA6Q8IY17 1366 aa17.82■□□□□ 0.44
LMNA-214ENST00000478063 GCP02774 474 aa17.82■□□□□ 0.44
LMNA-214ENST00000478063 RGPD2P0DJD1 1756 aa17.81■□□□□ 0.44
LMNA-214ENST00000478063 INSRP06213 1382 aa17.81■□□□□ 0.44
LMNA-214ENST00000478063 FLT4P35916 1363 aa17.81■□□□□ 0.44
LMNA-214ENST00000478063 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
LMNA-214ENST00000478063 AMPHP49418 695 aa17.81■□□□□ 0.44
LMNA-214ENST00000478063 LRRC59Q96AG4 307 aaKnown RBP17.81■□□□□ 0.44
LMNA-214ENST00000478063 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
LMNA-214ENST00000478063 CABLES1Q8TDN4 633 aa17.8■□□□□ 0.44
LMNA-214ENST00000478063 COL18A1P39060 1754 aa17.8■□□□□ 0.44
LMNA-214ENST00000478063 RGPD1P0DJD0 1748 aa17.8■□□□□ 0.44
LMNA-214ENST00000478063 KIF24Q5T7B8 1368 aa17.79■□□□□ 0.44
LMNA-214ENST00000478063 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
LMNA-214ENST00000478063 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
LMNA-214ENST00000478063 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
LMNA-214ENST00000478063 U2SURPO15042 1029 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms