RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SAFB2Q14151 953 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRA2B-211ENST00000477939 PRAM1Q96QH2 718 aa8.18□□□□□ -1.1
TRA2B-211ENST00000477939 BCCIPQ9P287 314 aaKnown RBP eCLIP8.18□□□□□ -1.13e-7■■■■□ 23.8
TRA2B-211ENST00000477939 ANKARQ7Z5J8 1434 aa8.18□□□□□ -1.1
TRA2B-211ENST00000477939 ALS2Q96Q42 1657 aa8.18□□□□□ -1.1
TRA2B-211ENST00000477939 NWD2Q9ULI1 1742 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 CRYBG1Q9Y4K1 1723 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 BRWD3Q6RI45 1802 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 NEUROD1Q13562 356 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 CHMP4AQ9BY43 222 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 PHF8Q9UPP1 1060 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 RALGAPBQ86X10 1494 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 TULP4Q9NRJ4 1543 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
TRA2B-211ENST00000477939 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
TRA2B-211ENST00000477939 KRT28Q7Z3Y7 464 aa8.16□□□□□ -1.1
TRA2B-211ENST00000477939 PRR36Q9H6K5 1346 aa8.15□□□□□ -1.1
TRA2B-211ENST00000477939 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
TRA2B-211ENST00000477939 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
TRA2B-211ENST00000477939 ITSN1Q15811 1721 aa8.15□□□□□ -1.11
TRA2B-211ENST00000477939 ATP7BP35670 1465 aa8.14□□□□□ -1.11
TRA2B-211ENST00000477939 ARHGEF10O15013 1369 aa8.14□□□□□ -1.11
TRA2B-211ENST00000477939 UNC5CLQ8IV45 518 aa8.14□□□□□ -1.11
TRA2B-211ENST00000477939 YTHDC1Q96MU7 727 aaKnown RBP8.14□□□□□ -1.11
TRA2B-211ENST00000477939 HIRIP3Q9BW71 556 aaPredicted RBP8.14□□□□□ -1.11
TRA2B-211ENST00000477939 POGKQ9P215 609 aa8.14□□□□□ -1.11
TRA2B-211ENST00000477939 TRAK1Q9UPV9 953 aa8.14□□□□□ -1.11
TRA2B-211ENST00000477939 TOPAZ1Q8N9V7 1692 aa8.14□□□□□ -1.11
TRA2B-211ENST00000477939 MINK1Q8N4C8 1332 aaPredicted RBP8.13□□□□□ -1.11
TRA2B-211ENST00000477939 PMFBP1Q8TBY8 1022 aa8.13□□□□□ -1.11
TRA2B-211ENST00000477939 DCAF11Q8TEB1 546 aa8.13□□□□□ -1.11
TRA2B-211ENST00000477939 COL14A1Q05707 1796 aaKnown RBP8.12□□□□□ -1.11
TRA2B-211ENST00000477939 KIAA1210Q9ULL0 1709 aa8.12□□□□□ -1.11
TRA2B-211ENST00000477939 EIF3AQ14152 1382 aaKnown RBP8.12□□□□□ -1.11
TRA2B-211ENST00000477939 PHRF1Q9P1Y6 1649 aaKnown RBP8.12□□□□□ -1.11
TRA2B-211ENST00000477939 PSME1Q06323 249 aa8.12□□□□□ -1.11
TRA2B-211ENST00000477939 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
TRA2B-211ENST00000477939 KDM2AQ9Y2K7 1162 aa8.12□□□□□ -1.11
TRA2B-211ENST00000477939 WASLO00401 505 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-211ENST00000477939 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-211ENST00000477939 VPS72Q15906 364 aa8.11□□□□□ -1.11
TRA2B-211ENST00000477939 LMOD2Q6P5Q4 547 aa8.11□□□□□ -1.11
TRA2B-211ENST00000477939 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
TRA2B-211ENST00000477939 BLMP54132 1417 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-211ENST00000477939 GPRASP1Q5JY77 1395 aa8.1□□□□□ -1.11
TRA2B-211ENST00000477939 FAM83GA6ND36 823 aa8.1□□□□□ -1.11
TRA2B-211ENST00000477939 AAMPQ13685 434 aa8.1□□□□□ -1.11
TRA2B-211ENST00000477939 TMEM132AQ24JP5 1023 aa8.1□□□□□ -1.11
TRA2B-211ENST00000477939 THSD7AQ9UPZ6 1657 aa8.1□□□□□ -1.11
TRA2B-211ENST00000477939 SEPT12Q8IYM1 358 aa8.09□□□□□ -1.11
TRA2B-211ENST00000477939 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
TRA2B-211ENST00000477939 ARID3AQ99856 593 aa8.09□□□□□ -1.11
TRA2B-211ENST00000477939 NRKQ7Z2Y5 1582 aa8.09□□□□□ -1.11
TRA2B-211ENST00000477939 ONECUT3O60422 494 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-211ENST00000477939 CCDC125Q86Z20 511 aa8.08□□□□□ -1.12
TRA2B-211ENST00000477939 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-211ENST00000477939 POLR3AO14802 1390 aaPredicted RBP8.08□□□□□ -1.12
TRA2B-211ENST00000477939 QRICH2Q9H0J4 1663 aa8.08□□□□□ -1.12
TRA2B-211ENST00000477939 TNS1Q9HBL0 1735 aaKnown RBP8.07□□□□□ -1.12
TRA2B-211ENST00000477939 NGDNQ8NEJ9 315 aaKnown RBP8.07□□□□□ -1.12
TRA2B-211ENST00000477939 NAP1L5Q96NT1 182 aaPredicted RBP8.07□□□□□ -1.12
TRA2B-211ENST00000477939 BTG4Q9NY30 223 aa8.07□□□□□ -1.12
TRA2B-211ENST00000477939 CCDC9Q9Y3X0 531 aaKnown RBP8.07□□□□□ -1.12
TRA2B-211ENST00000477939 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
TRA2B-211ENST00000477939 LMO7Q8WWI1 1683 aa8.06□□□□□ -1.12
TRA2B-211ENST00000477939 FAM98CQ17RN3 349 aaKnown RBP8.06□□□□□ -1.12
TRA2B-211ENST00000477939 SAMD1Q6SPF0 538 aaPredicted RBP8.06□□□□□ -1.12
TRA2B-211ENST00000477939 KRT27Q7Z3Y8 459 aa8.06□□□□□ -1.12
TRA2B-211ENST00000477939 DEFB132Q7Z7B7 95 aa8.06□□□□□ -1.12
TRA2B-211ENST00000477939 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
TRA2B-211ENST00000477939 ZRANB1Q9UGI0 708 aa8.06□□□□□ -1.12
TRA2B-211ENST00000477939 KIAA0232Q92628 1395 aa8.06□□□□□ -1.12
TRA2B-211ENST00000477939 SPATA31A5Q5VU36 1347 aa8.05□□□□□ -1.12
TRA2B-211ENST00000477939 SPATA31A7Q8IWB4 1347 aa8.05□□□□□ -1.12
TRA2B-211ENST00000477939 PAK3O75914 559 aaPredicted RBP8.05□□□□□ -1.12
TRA2B-211ENST00000477939 NBPF1Q3BBV0 1214 aa8.05□□□□□ -1.12
TRA2B-211ENST00000477939 CDK19Q9BWU1 502 aa8.05□□□□□ -1.12
TRA2B-211ENST00000477939 LRP5O75197 1615 aa8.04□□□□□ -1.12
TRA2B-211ENST00000477939 TRPM1Q7Z4N2 1603 aa8.04□□□□□ -1.12
TRA2B-211ENST00000477939 A0A0G2JS52 829 aa8.04□□□□□ -1.12
TRA2B-211ENST00000477939 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
TRA2B-211ENST00000477939 ACEP12821 1306 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 CAMTA1Q9Y6Y1 1673 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 CHRNA2Q15822 529 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 FAM182BQ5T319 152 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 NUTM2GQ5VZR2 741 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 CCDC61Q9Y6R9 512 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 DISP2A7MBM2 1401 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 PPIP5K1Q6PFW1 1433 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 SSH2Q76I76 1423 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 USP19O94966 1318 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 SPATA31A1Q5TZJ5 1347 aa8.03□□□□□ -1.12
TRA2B-211ENST00000477939 PIK3C2AO00443 1686 aa8.02□□□□□ -1.13
TRA2B-211ENST00000477939 PLEKHG3A1L390 1219 aa8.02□□□□□ -1.13
TRA2B-211ENST00000477939 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
TRA2B-211ENST00000477939 SF3B2Q13435 895 aaKnown RBP8.02□□□□□ -1.13
TRA2B-211ENST00000477939 NBPF8Q3BBV2 869 aa8.02□□□□□ -1.13
TRA2B-211ENST00000477939 CENPJQ9HC77 1338 aaPredicted RBP8.02□□□□□ -1.13
TRA2B-211ENST00000477939 CPDO75976 1380 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms