RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 EDC4Q6P2E9 1401 aaKnown RBP21.52■■□□□ 1.04
MMP11-208ENST00000477567 PSME1Q06323 249 aa21.51■■□□□ 1.03
MMP11-208ENST00000477567 PHLPP1O60346 1717 aa21.5■■□□□ 1.03
MMP11-208ENST00000477567 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
MMP11-208ENST00000477567 PER1O15534 1290 aaPredicted RBP21.49■■□□□ 1.03
MMP11-208ENST00000477567 KRT28Q7Z3Y7 464 aa21.49■■□□□ 1.03
MMP11-208ENST00000477567 DDX17Q92841 729 aaKnown RBP21.49■■□□□ 1.03
MMP11-208ENST00000477567 SBNO1A3KN83 1393 aa21.48■■□□□ 1.03
MMP11-208ENST00000477567 COL16A1Q07092 1604 aaPredicted RBP21.48■■□□□ 1.03
MMP11-208ENST00000477567 DDX10Q13206 875 aaKnown RBP21.48■■□□□ 1.03
MMP11-208ENST00000477567 KIF20BQ96Q89 1820 aa21.47■■□□□ 1.03
MMP11-208ENST00000477567 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
MMP11-208ENST00000477567 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
MMP11-208ENST00000477567 TTC21BQ7Z4L5 1316 aa21.46■■□□□ 1.03
MMP11-208ENST00000477567 TTC21AQ8NDW8 1320 aa21.46■■□□□ 1.03
MMP11-208ENST00000477567 PIK3C2AO00443 1686 aa21.45■■□□□ 1.02
MMP11-208ENST00000477567 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
MMP11-208ENST00000477567 XPCQ01831 940 aaPredicted RBP21.44■■□□□ 1.02
MMP11-208ENST00000477567 SPATA31A3Q5VYP0 1347 aa21.43■■□□□ 1.02
MMP11-208ENST00000477567 TNS3Q68CZ2 1445 aa21.43■■□□□ 1.02
MMP11-208ENST00000477567 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
MMP11-208ENST00000477567 NPC1L1Q9UHC9 1359 aa21.42■■□□□ 1.02
MMP11-208ENST00000477567 KNSTRNQ9Y448 316 aa21.42■■□□□ 1.02
MMP11-208ENST00000477567 MARF1Q9Y4F3 1742 aaKnown RBP21.42■■□□□ 1.02
MMP11-208ENST00000477567 CGNL1Q0VF96 1302 aa21.41■■□□□ 1.02
MMP11-208ENST00000477567 LRRC59Q96AG4 307 aaKnown RBP21.41■■□□□ 1.02
MMP11-208ENST00000477567 USP31Q70CQ4 1352 aa21.4■■□□□ 1.02
MMP11-208ENST00000477567 FYB1O15117 783 aa21.4■■□□□ 1.02
MMP11-208ENST00000477567 AMER1Q5JTC6 1135 aaPredicted RBP21.4■■□□□ 1.02
MMP11-208ENST00000477567 ARHGEF10O15013 1369 aa21.39■■□□□ 1.02
MMP11-208ENST00000477567 NSD2O96028 1365 aa21.39■■□□□ 1.02
MMP11-208ENST00000477567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.39■■□□□ 1.01
MMP11-208ENST00000477567 COL22A1Q8NFW1 1626 aaPredicted RBP21.39■■□□□ 1.01
MMP11-208ENST00000477567 CRYBG1Q9Y4K1 1723 aa21.38■■□□□ 1.01
MMP11-208ENST00000477567 PAK3O75914 559 aaPredicted RBP21.38■■□□□ 1.01
MMP11-208ENST00000477567 SHPRHQ149N8 1683 aa21.37■■□□□ 1.01
MMP11-208ENST00000477567 ABTB2Q8N961 1025 aa21.37■■□□□ 1.01
MMP11-208ENST00000477567 OVOS2A0A0J9YW53 1432 aa21.37■■□□□ 1.01
MMP11-208ENST00000477567 OVOS2Q6IE36 1432 aa21.37■■□□□ 1.01
MMP11-208ENST00000477567 NME9Q86XW9 330 aa21.36■■□□□ 1.01
MMP11-208ENST00000477567 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
MMP11-208ENST00000477567 ABCA3Q99758 1704 aa21.33■■□□□ 1.01
MMP11-208ENST00000477567 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
MMP11-208ENST00000477567 USP19O94966 1318 aa21.32■■□□□ 1
MMP11-208ENST00000477567 NLRP6P59044 892 aa21.32■■□□□ 1
MMP11-208ENST00000477567 GGNBP2Q9H3C7 697 aa21.32■■□□□ 1
MMP11-208ENST00000477567 SLIT3O75094 1523 aa21.32■■□□□ 1
MMP11-208ENST00000477567 PHRF1Q9P1Y6 1649 aaKnown RBP21.32■■□□□ 1
MMP11-208ENST00000477567 ZRANB1Q9UGI0 708 aa21.31■■□□□ 1
MMP11-208ENST00000477567 COG3Q96JB2 828 aa21.3■■□□□ 1
MMP11-208ENST00000477567 JCADQ9P266 1359 aa21.3■■□□□ 1
MMP11-208ENST00000477567 LMOD2Q6P5Q4 547 aa21.29■■□□□ 1
MMP11-208ENST00000477567 MAP2P11137 1827 aaKnown RBP21.29■■□□□ 1
MMP11-208ENST00000477567 NUTM2GQ5VZR2 741 aa21.28■■□□□ 1
MMP11-208ENST00000477567 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
MMP11-208ENST00000477567 PARD3Q8TEW0 1356 aa21.26■□□□□ 0.99
MMP11-208ENST00000477567 NFAT5O94916 1531 aa21.26■□□□□ 0.99
MMP11-208ENST00000477567 KCNH5Q8NCM2 988 aa21.25■□□□□ 0.99
MMP11-208ENST00000477567 AATKQ6ZMQ8 1374 aa21.24■□□□□ 0.99
MMP11-208ENST00000477567 MORC1Q86VD1 984 aa21.24■□□□□ 0.99
MMP11-208ENST00000477567 LTN1O94822 1766 aa21.23■□□□□ 0.99
MMP11-208ENST00000477567 GCP02774 474 aa21.23■□□□□ 0.99
MMP11-208ENST00000477567 SPATA31A6Q5VVP1 1343 aa21.23■□□□□ 0.99
MMP11-208ENST00000477567 RALBP1Q15311 655 aa21.22■□□□□ 0.99
MMP11-208ENST00000477567 CABLES1Q8TDN4 633 aa21.22■□□□□ 0.99
MMP11-208ENST00000477567 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
MMP11-208ENST00000477567 PRKRIP1Q9H875 184 aaPredicted RBP21.21■□□□□ 0.99
MMP11-208ENST00000477567 CPDO75976 1380 aa21.2■□□□□ 0.98
MMP11-208ENST00000477567 COL18A1P39060 1754 aa21.18■□□□□ 0.98
MMP11-208ENST00000477567 SMG6Q86US8 1419 aaKnown RBP21.18■□□□□ 0.98
MMP11-208ENST00000477567 ARHGEF25Q86VW2 580 aa21.17■□□□□ 0.98
MMP11-208ENST00000477567 ABCC6O95255 1503 aa21.17■□□□□ 0.98
MMP11-208ENST00000477567 KIF24Q5T7B8 1368 aa21.16■□□□□ 0.98
MMP11-208ENST00000477567 ANP32CO43423 234 aa21.16■□□□□ 0.98
MMP11-208ENST00000477567 PEAK1Q9H792 1746 aa21.15■□□□□ 0.98
MMP11-208ENST00000477567 FBLN1P23142 703 aa21.15■□□□□ 0.98
MMP11-208ENST00000477567 CNGB1Q14028 1251 aaPredicted RBP21.15■□□□□ 0.98
MMP11-208ENST00000477567 POLKQ9UBT6 870 aa21.15■□□□□ 0.98
MMP11-208ENST00000477567 MAP3K19Q56UN5 1328 aa21.14■□□□□ 0.97
MMP11-208ENST00000477567 PPP2R1AP30153 589 aa21.14■□□□□ 0.97
MMP11-208ENST00000477567 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
MMP11-208ENST00000477567 RGPD5Q99666 1765 aa21.14■□□□□ 0.97
MMP11-208ENST00000477567 LMO7Q8WWI1 1683 aa21.14■□□□□ 0.97
MMP11-208ENST00000477567 LRP6O75581 1613 aa21.14■□□□□ 0.97
MMP11-208ENST00000477567 COL14A1Q05707 1796 aaKnown RBP21.13■□□□□ 0.97
MMP11-208ENST00000477567 KIAA0232Q92628 1395 aa21.13■□□□□ 0.97
MMP11-208ENST00000477567 SOX12O15370 315 aa21.13■□□□□ 0.97
MMP11-208ENST00000477567 PLEKHG5O94827 1062 aa21.13■□□□□ 0.97
MMP11-208ENST00000477567 HAP1P54257 671 aaPredicted RBP21.13■□□□□ 0.97
MMP11-208ENST00000477567 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
MMP11-208ENST00000477567 MYBBP1AQ9BQG0 1328 aaKnown RBP21.12■□□□□ 0.97
MMP11-208ENST00000477567 ZC3H6P61129 1189 aaKnown RBP21.12■□□□□ 0.97
MMP11-208ENST00000477567 RRS1Q15050 365 aaKnown RBP21.12■□□□□ 0.97
MMP11-208ENST00000477567 RGS17Q9UGC6 210 aaPredicted RBP21.12■□□□□ 0.97
MMP11-208ENST00000477567 CDK12Q9NYV4 1490 aaPredicted RBP21.11■□□□□ 0.97
MMP11-208ENST00000477567 INSRP06213 1382 aa21.1■□□□□ 0.97
MMP11-208ENST00000477567 NUTM2BA6NNL0 878 aaPredicted RBP21.1■□□□□ 0.97
MMP11-208ENST00000477567 NUTM2EB1AL46 878 aaPredicted RBP21.1■□□□□ 0.97
MMP11-208ENST00000477567 NUTM2AQ8IVF1 878 aaPredicted RBP21.1■□□□□ 0.97
MMP11-208ENST00000477567 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 2214.4 ms