RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
PABPC4-212ENST00000477556 KRT27Q7Z3Y8 459 aa19.07■□□□□ 0.64
PABPC4-212ENST00000477556 ATP7BP35670 1465 aa19.06■□□□□ 0.64
PABPC4-212ENST00000477556 COL14A1Q05707 1796 aaKnown RBP19.06■□□□□ 0.64
PABPC4-212ENST00000477556 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
PABPC4-212ENST00000477556 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
PABPC4-212ENST00000477556 FAM98CQ17RN3 349 aaKnown RBP19.04■□□□□ 0.64
PABPC4-212ENST00000477556 NRAPQ86VF7 1730 aa19.04■□□□□ 0.64
PABPC4-212ENST00000477556 PRDM11Q9NQV5 511 aa19.04■□□□□ 0.64
PABPC4-212ENST00000477556 DEFB132Q7Z7B7 95 aa19.03■□□□□ 0.64
PABPC4-212ENST00000477556 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
PABPC4-212ENST00000477556 KIAA1210Q9ULL0 1709 aa19.01■□□□□ 0.63
PABPC4-212ENST00000477556 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
PABPC4-212ENST00000477556 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
PABPC4-212ENST00000477556 ACEP12821 1306 aa19■□□□□ 0.63
PABPC4-212ENST00000477556 EP400Q96L91 3159 aa18.99■□□□□ 0.63
PABPC4-212ENST00000477556 POLR3AO14802 1390 aaPredicted RBP18.99■□□□□ 0.63
PABPC4-212ENST00000477556 NBPF1Q3BBV0 1214 aa18.99■□□□□ 0.63
PABPC4-212ENST00000477556 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
PABPC4-212ENST00000477556 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
PABPC4-212ENST00000477556 SRCAPQ6ZRS2 3230 aa18.98■□□□□ 0.63
PABPC4-212ENST00000477556 NBPF8Q3BBV2 869 aa18.98■□□□□ 0.63
PABPC4-212ENST00000477556 PLEKHG3A1L390 1219 aa18.97■□□□□ 0.63
PABPC4-212ENST00000477556 BAG6P46379 1132 aa18.97■□□□□ 0.63
PABPC4-212ENST00000477556 CHRNA2Q15822 529 aa18.96■□□□□ 0.63
PABPC4-212ENST00000477556 NUTM2GQ5VZR2 741 aa18.96■□□□□ 0.63
PABPC4-212ENST00000477556 TOPAZ1Q8N9V7 1692 aa18.95■□□□□ 0.62
PABPC4-212ENST00000477556 ZC3H6P61129 1189 aaKnown RBP18.95■□□□□ 0.62
PABPC4-212ENST00000477556 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
PABPC4-212ENST00000477556 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
PABPC4-212ENST00000477556 CENPJQ9HC77 1338 aaPredicted RBP18.95■□□□□ 0.62
PABPC4-212ENST00000477556 PHRF1Q9P1Y6 1649 aaKnown RBP18.94■□□□□ 0.62
PABPC4-212ENST00000477556 ABTB2Q8N961 1025 aa18.94■□□□□ 0.62
PABPC4-212ENST00000477556 SPATA31A1Q5TZJ5 1347 aa18.93■□□□□ 0.62
PABPC4-212ENST00000477556 EVA1CP58658 441 aa18.92■□□□□ 0.62
PABPC4-212ENST00000477556 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
PABPC4-212ENST00000477556 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
PABPC4-212ENST00000477556 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
PABPC4-212ENST00000477556 NLRP13Q86W25 1043 aa18.9■□□□□ 0.62
PABPC4-212ENST00000477556 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
PABPC4-212ENST00000477556 USP19O94966 1318 aa18.89■□□□□ 0.61
PABPC4-212ENST00000477556 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
PABPC4-212ENST00000477556 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
PABPC4-212ENST00000477556 USP35Q9P2H5 1018 aa18.88■□□□□ 0.61
PABPC4-212ENST00000477556 CPDO75976 1380 aa18.88■□□□□ 0.61
PABPC4-212ENST00000477556 SSH2Q76I76 1423 aa18.88■□□□□ 0.61
PABPC4-212ENST00000477556 RGPD1P0DJD0 1748 aa18.88■□□□□ 0.61
PABPC4-212ENST00000477556 EN1Q05925 392 aaPredicted RBP18.87■□□□□ 0.61
PABPC4-212ENST00000477556 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
PABPC4-212ENST00000477556 FAM196AQ6ZSG2 479 aa18.86■□□□□ 0.61
PABPC4-212ENST00000477556 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
PABPC4-212ENST00000477556 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
PABPC4-212ENST00000477556 GCP02774 474 aa18.85■□□□□ 0.61
PABPC4-212ENST00000477556 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
PABPC4-212ENST00000477556 PSDA5PKW4 1024 aaPredicted RBP18.84■□□□□ 0.61
PABPC4-212ENST00000477556 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
PABPC4-212ENST00000477556 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
PABPC4-212ENST00000477556 CABP1Q9NZU7 370 aa18.84■□□□□ 0.61
PABPC4-212ENST00000477556 CAMTA1Q9Y6Y1 1673 aa18.84■□□□□ 0.61
PABPC4-212ENST00000477556 EVC2Q86UK5 1308 aa18.83■□□□□ 0.61
PABPC4-212ENST00000477556 TCP11L2Q8N4U5 519 aa18.83■□□□□ 0.6
PABPC4-212ENST00000477556 USP6P35125 1406 aa18.83■□□□□ 0.6
PABPC4-212ENST00000477556 TRIM37O94972 964 aa18.82■□□□□ 0.6
PABPC4-212ENST00000477556 NLRP6P59044 892 aa18.82■□□□□ 0.6
PABPC4-212ENST00000477556 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
PABPC4-212ENST00000477556 THRAP3Q9Y2W1 955 aaKnown RBP18.82■□□□□ 0.6
PABPC4-212ENST00000477556 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
PABPC4-212ENST00000477556 LMO7Q8WWI1 1683 aa18.81■□□□□ 0.6
PABPC4-212ENST00000477556 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
PABPC4-212ENST00000477556 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
PABPC4-212ENST00000477556 EZH2Q15910 746 aaKnown RBP18.8■□□□□ 0.6
PABPC4-212ENST00000477556 LRP5O75197 1615 aa18.8■□□□□ 0.6
PABPC4-212ENST00000477556 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
PABPC4-212ENST00000477556 TRPM1Q7Z4N2 1603 aa18.79■□□□□ 0.6
PABPC4-212ENST00000477556 APBA3O96018 575 aa18.79■□□□□ 0.6
PABPC4-212ENST00000477556 COL5A2P05997 1499 aaPredicted RBP18.78■□□□□ 0.6
PABPC4-212ENST00000477556 PARD3Q8TEW0 1356 aa18.78■□□□□ 0.6
PABPC4-212ENST00000477556 R3HDM1Q15032 1099 aaKnown RBP18.77■□□□□ 0.6
PABPC4-212ENST00000477556 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
PABPC4-212ENST00000477556 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
PABPC4-212ENST00000477556 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
PABPC4-212ENST00000477556 CRB1P82279 1406 aa18.76■□□□□ 0.59
PABPC4-212ENST00000477556 SLIT3O75094 1523 aa18.76■□□□□ 0.59
PABPC4-212ENST00000477556 C11orf95C9JLR9 678 aaPredicted RBP18.75■□□□□ 0.59
PABPC4-212ENST00000477556 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
PABPC4-212ENST00000477556 TOM1L2Q6ZVM7 507 aa18.73■□□□□ 0.59
PABPC4-212ENST00000477556 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
PABPC4-212ENST00000477556 PIK3C2AO00443 1686 aa18.72■□□□□ 0.59
PABPC4-212ENST00000477556 TTC21AQ8NDW8 1320 aa18.72■□□□□ 0.59
PABPC4-212ENST00000477556 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
PABPC4-212ENST00000477556 OVOS2A0A0G2JMS6 1433 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 OVOS2A0A0J9YW53 1432 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 CPSF1Q10570 1443 aaKnown RBP18.69■□□□□ 0.58
PABPC4-212ENST00000477556 OVOS2Q6IE36 1432 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 DDB1Q16531 1140 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 NBPF14Q5TI25 921 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 ARHGEF25Q86VW2 580 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
PABPC4-212ENST00000477556 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
PABPC4-212ENST00000477556 SOX12O15370 315 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms