RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 SH3BP2P78314 561 aa8.31□□□□□ -1.08
NSMCE4A-208ENST00000477289 TRIM66O15016 1216 aa8.3□□□□□ -1.08
NSMCE4A-208ENST00000477289 PARP9Q8IXQ6 854 aa8.3□□□□□ -1.08
NSMCE4A-208ENST00000477289 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
NSMCE4A-208ENST00000477289 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
NSMCE4A-208ENST00000477289 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
NSMCE4A-208ENST00000477289 SHROOM4Q9ULL8 1493 aa8.27□□□□□ -1.09
NSMCE4A-208ENST00000477289 MS4A1P11836 297 aa8.27□□□□□ -1.09
NSMCE4A-208ENST00000477289 TLL2Q9Y6L7 1015 aa8.27□□□□□ -1.09
NSMCE4A-208ENST00000477289 CCNYL3P0C7X3 344 aa8.26□□□□□ -1.09
NSMCE4A-208ENST00000477289 AK7Q96M32 723 aa8.26□□□□□ -1.09
NSMCE4A-208ENST00000477289 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
NSMCE4A-208ENST00000477289 SUZ12Q15022 739 aaKnown RBP8.25□□□□□ -1.09
NSMCE4A-208ENST00000477289 MRPL14Q6P1L8 145 aaKnown RBP8.25□□□□□ -1.09
NSMCE4A-208ENST00000477289 VSIG8P0DPA2 414 aa8.24□□□□□ -1.09
NSMCE4A-208ENST00000477289 NNTQ13423 1086 aa8.24□□□□□ -1.09
NSMCE4A-208ENST00000477289 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
NSMCE4A-208ENST00000477289 BAP1Q92560 729 aa8.24□□□□□ -1.09
NSMCE4A-208ENST00000477289 PURBQ96QR8 312 aaKnown RBP8.24□□□□□ -1.09
NSMCE4A-208ENST00000477289 UNC93B1Q9H1C4 597 aa8.24□□□□□ -1.09
NSMCE4A-208ENST00000477289 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
NSMCE4A-208ENST00000477289 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
NSMCE4A-208ENST00000477289 SCARF1Q14162 830 aa8.23□□□□□ -1.09
NSMCE4A-208ENST00000477289 RSBN1LQ6PCB5 846 aaPredicted RBP8.23□□□□□ -1.09
NSMCE4A-208ENST00000477289 PRR7Q8TB68 274 aa8.23□□□□□ -1.09
NSMCE4A-208ENST00000477289 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
NSMCE4A-208ENST00000477289 TIMP2P16035 220 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 VARSP26640 1264 aaKnown RBP8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 GJA5P36382 358 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 MTMR2Q13614 643 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 PTPRNQ16849 979 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 MPNDQ8N594 471 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 PCDHB15Q9Y5E8 787 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 BICRAQ9NZM4 1560 aa8.22□□□□□ -1.09
NSMCE4A-208ENST00000477289 SPTLC1O15269 473 aa8.21□□□□□ -1.1
NSMCE4A-208ENST00000477289 SPDYE5A6NIY4 337 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 ADH1CP00326 375 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 PDE4DQ08499 809 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 KCNH2Q12809 1159 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 SLC24A3Q9HC58 644 aa8.2□□□□□ -1.1
NSMCE4A-208ENST00000477289 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
NSMCE4A-208ENST00000477289 DIXDC1Q155Q3 683 aa8.19□□□□□ -1.1
NSMCE4A-208ENST00000477289 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
NSMCE4A-208ENST00000477289 GSK3AP49840 483 aa8.18□□□□□ -1.1
NSMCE4A-208ENST00000477289 KCTD17Q8N5Z5 321 aa8.18□□□□□ -1.1
NSMCE4A-208ENST00000477289 KLF16Q9BXK1 252 aaPredicted RBP8.18□□□□□ -1.1
NSMCE4A-208ENST00000477289 HRCP23327 699 aa8.17□□□□□ -1.1
NSMCE4A-208ENST00000477289 RIC3Q7Z5B4 369 aa8.17□□□□□ -1.1
NSMCE4A-208ENST00000477289 LYPD8Q6UX82 237 aa8.16□□□□□ -1.1
NSMCE4A-208ENST00000477289 CABLES1Q8TDN4 633 aa8.16□□□□□ -1.1
NSMCE4A-208ENST00000477289 MAN1A2O60476 641 aa8.15□□□□□ -1.1
NSMCE4A-208ENST00000477289 MYSM1Q5VVJ2 828 aa8.15□□□□□ -1.1
NSMCE4A-208ENST00000477289 ZBTB3Q9H5J0 574 aa8.15□□□□□ -1.1
NSMCE4A-208ENST00000477289 LIMD1Q9UGP4 676 aa8.15□□□□□ -1.1
NSMCE4A-208ENST00000477289 PPFIA3O75145 1194 aa8.14□□□□□ -1.11
NSMCE4A-208ENST00000477289 PRPF38BQ5VTL8 546 aaKnown RBP8.14□□□□□ -1.11
NSMCE4A-208ENST00000477289 FAM174AQ8TBP5 190 aa8.14□□□□□ -1.11
NSMCE4A-208ENST00000477289 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
NSMCE4A-208ENST00000477289 ZIC2O95409 532 aaPredicted RBP8.13□□□□□ -1.11
NSMCE4A-208ENST00000477289 QPCTQ16769 361 aa8.13□□□□□ -1.11
NSMCE4A-208ENST00000477289 CSPP1Q1MSJ5 1256 aa8.13□□□□□ -1.11
NSMCE4A-208ENST00000477289 C6orf118Q5T5N4 469 aa8.13□□□□□ -1.11
NSMCE4A-208ENST00000477289 F12P00748 615 aaPredicted RBP8.12□□□□□ -1.11
NSMCE4A-208ENST00000477289 TMEM151AQ8N4L1 468 aa8.12□□□□□ -1.11
NSMCE4A-208ENST00000477289 ITPKCQ96DU7 683 aa8.12□□□□□ -1.11
NSMCE4A-208ENST00000477289 CDK15Q96Q40 435 aa8.12□□□□□ -1.11
NSMCE4A-208ENST00000477289 PER1O15534 1290 aaPredicted RBP8.11□□□□□ -1.11
NSMCE4A-208ENST00000477289 LILRB3O75022 631 aa8.11□□□□□ -1.11
NSMCE4A-208ENST00000477289 ARID5BQ14865 1188 aa8.11□□□□□ -1.11
NSMCE4A-208ENST00000477289 TUSC1Q2TAM9 212 aa8.11□□□□□ -1.11
NSMCE4A-208ENST00000477289 MAP10Q9P2G4 905 aa8.11□□□□□ -1.11
NSMCE4A-208ENST00000477289 GDF11O95390 407 aa8.1□□□□□ -1.11
NSMCE4A-208ENST00000477289 NR3C2P08235 984 aa8.1□□□□□ -1.11
NSMCE4A-208ENST00000477289 CTHP32929 405 aa8.1□□□□□ -1.11
NSMCE4A-208ENST00000477289 RASSF7Q02833 373 aa8.1□□□□□ -1.11
NSMCE4A-208ENST00000477289 FOXJ1Q92949 421 aa8.1□□□□□ -1.11
NSMCE4A-208ENST00000477289 BMP2P12643 396 aa8.08□□□□□ -1.12
NSMCE4A-208ENST00000477289 KRT76Q01546 638 aa8.08□□□□□ -1.12
NSMCE4A-208ENST00000477289 NR5A1Q13285 461 aa8.08□□□□□ -1.12
NSMCE4A-208ENST00000477289 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
NSMCE4A-208ENST00000477289 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
NSMCE4A-208ENST00000477289 UPP2O95045 317 aa8.07□□□□□ -1.12
NSMCE4A-208ENST00000477289 DNMT3LQ9UJW3 386 aa8.07□□□□□ -1.12
NSMCE4A-208ENST00000477289 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
NSMCE4A-208ENST00000477289 SOS2Q07890 1332 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 EIF4G1Q04637 1599 aaKnown RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 NUTM2BA6NNL0 878 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 NUTM2EB1AL46 878 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 GRM5P41594 1212 aa8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 NUTM2DQ5VT03 806 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 NUTM2AQ8IVF1 878 aaPredicted RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 MEIOBQ8N635 442 aa8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 GPR161Q8N6U8 529 aaKnown RBP8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 CNTNAP3BQ96NU0 1288 aa8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 CNTNAP3Q9BZ76 1288 aa8.06□□□□□ -1.12
NSMCE4A-208ENST00000477289 RNF225M0QZC1 329 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms