RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 EPS8L1Q8TE68 723 aa11.43□□□□□ -0.58
TM9SF3-204ENST00000475401 GPKOWQ92917 476 aaPredicted RBP eCLIP11.43□□□□□ -0.58
TM9SF3-204ENST00000475401 ABL2P42684 1182 aa11.42□□□□□ -0.58
TM9SF3-204ENST00000475401 GDPD2Q9HCC8 539 aa11.42□□□□□ -0.58
TM9SF3-204ENST00000475401 SLC19A1P41440 591 aa11.41□□□□□ -0.58
TM9SF3-204ENST00000475401 TRIM32Q13049 653 aa11.41□□□□□ -0.58
TM9SF3-204ENST00000475401 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
TM9SF3-204ENST00000475401 COG6Q9Y2V7 657 aa11.41□□□□□ -0.58
TM9SF3-204ENST00000475401 PLA2G2CQ5R387 149 aa11.4□□□□□ -0.58
TM9SF3-204ENST00000475401 AGERQ15109 404 aa11.39□□□□□ -0.59
TM9SF3-204ENST00000475401 BAP1Q92560 729 aa11.39□□□□□ -0.59
TM9SF3-204ENST00000475401 PTK2Q05397 1052 aa11.38□□□□□ -0.59
TM9SF3-204ENST00000475401 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
TM9SF3-204ENST00000475401 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
TM9SF3-204ENST00000475401 WNT7BP56706 349 aa11.37□□□□□ -0.59
TM9SF3-204ENST00000475401 PDXDC2PQ6P474 469 aa11.37□□□□□ -0.59
TM9SF3-204ENST00000475401 ZNF511Q8NB15 262 aa11.37□□□□□ -0.59
TM9SF3-204ENST00000475401 PRKD2Q9BZL6 878 aa11.37□□□□□ -0.59
TM9SF3-204ENST00000475401 ZMYND15Q9H091 742 aa11.37□□□□□ -0.59
TM9SF3-204ENST00000475401 V9GY48 417 aaPredicted RBP11.37□□□□□ -0.59
TM9SF3-204ENST00000475401 A6NJR5 290 aa11.36□□□□□ -0.59
TM9SF3-204ENST00000475401 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
TM9SF3-204ENST00000475401 BPHLQ86WA6 291 aaPredicted RBP11.36□□□□□ -0.59
TM9SF3-204ENST00000475401 POM121Q96HA1 1249 aa11.36□□□□□ -0.59
TM9SF3-204ENST00000475401 GPSM3Q9Y4H4 160 aa11.36□□□□□ -0.59
TM9SF3-204ENST00000475401 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
TM9SF3-204ENST00000475401 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
TM9SF3-204ENST00000475401 ZNF330Q9Y3S2 320 aaPredicted RBP11.35□□□□□ -0.59
TM9SF3-204ENST00000475401 RGS20O76081 388 aa11.34□□□□□ -0.59
TM9SF3-204ENST00000475401 ARHGAP9Q9BRR9 750 aa11.34□□□□□ -0.59
TM9SF3-204ENST00000475401 ZBBXA8MT70 800 aa11.33□□□□□ -0.6
TM9SF3-204ENST00000475401 ZBTB33Q86T24 672 aa11.33□□□□□ -0.6
TM9SF3-204ENST00000475401 SH3BP2P78314 561 aa11.32□□□□□ -0.6
TM9SF3-204ENST00000475401 SPRYD7Q5W111 196 aa11.32□□□□□ -0.6
TM9SF3-204ENST00000475401 ZNF592Q92610 1267 aa11.32□□□□□ -0.6
TM9SF3-204ENST00000475401 MAGEB6P1A0A0J9YX57 407 aa11.31□□□□□ -0.6
TM9SF3-204ENST00000475401 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
TM9SF3-204ENST00000475401 EHBP1Q8NDI1 1231 aa11.31□□□□□ -0.6
TM9SF3-204ENST00000475401 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
TM9SF3-204ENST00000475401 NR1H3Q13133 447 aa11.3□□□□□ -0.6
TM9SF3-204ENST00000475401 ZNF697Q5TEC3 545 aa11.3□□□□□ -0.6
TM9SF3-204ENST00000475401 CARD14Q9BXL6 1004 aa11.3□□□□□ -0.6
TM9SF3-204ENST00000475401 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
TM9SF3-204ENST00000475401 SH3BP5LQ7L8J4 393 aa11.29□□□□□ -0.6
TM9SF3-204ENST00000475401 FOXJ1Q92949 421 aa11.29□□□□□ -0.6
TM9SF3-204ENST00000475401 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
TM9SF3-204ENST00000475401 IRF5Q13568 498 aa11.28□□□□□ -0.6
TM9SF3-204ENST00000475401 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
TM9SF3-204ENST00000475401 FAM174AQ8TBP5 190 aa11.28□□□□□ -0.6
TM9SF3-204ENST00000475401 EMID1Q96A84 441 aaPredicted RBP11.28□□□□□ -0.6
TM9SF3-204ENST00000475401 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
TM9SF3-204ENST00000475401 SKOR1P84550 965 aa11.27□□□□□ -0.61
TM9SF3-204ENST00000475401 WNT7AO00755 349 aa11.26□□□□□ -0.61
TM9SF3-204ENST00000475401 GPR37L1O60883 481 aa11.26□□□□□ -0.61
TM9SF3-204ENST00000475401 SH3RF1Q7Z6J0 888 aa11.26□□□□□ -0.61
TM9SF3-204ENST00000475401 TRAK2O60296 914 aa11.25□□□□□ -0.61
TM9SF3-204ENST00000475401 SOX11P35716 441 aa11.25□□□□□ -0.61
TM9SF3-204ENST00000475401 MCCD1P59942 119 aaPredicted RBP11.25□□□□□ -0.61
TM9SF3-204ENST00000475401 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
TM9SF3-204ENST00000475401 FOXC1Q12948 553 aa11.25□□□□□ -0.61
TM9SF3-204ENST00000475401 ADAM32Q8TC27 787 aa11.25□□□□□ -0.61
TM9SF3-204ENST00000475401 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
TM9SF3-204ENST00000475401 SLC10A4Q96EP9 437 aa11.24□□□□□ -0.61
TM9SF3-204ENST00000475401 PCDHB9Q9Y5E1 797 aa11.24□□□□□ -0.61
TM9SF3-204ENST00000475401 FNBP4Q8N3X1 1017 aaPredicted RBP11.23□□□□□ -0.61
TM9SF3-204ENST00000475401 CDV3Q9UKY7 258 aaKnown RBP11.23□□□□□ -0.61
TM9SF3-204ENST00000475401 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
TM9SF3-204ENST00000475401 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
TM9SF3-204ENST00000475401 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
TM9SF3-204ENST00000475401 MRGPRX2Q96LB1 330 aa11.21□□□□□ -0.61
TM9SF3-204ENST00000475401 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
TM9SF3-204ENST00000475401 C1QTNF2Q9BXJ5 285 aa11.2□□□□□ -0.62
TM9SF3-204ENST00000475401 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
TM9SF3-204ENST00000475401 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
TM9SF3-204ENST00000475401 OCSTAMPQ9BR26 566 aa11.19□□□□□ -0.62
TM9SF3-204ENST00000475401 TTC24A2A3L6 582 aaPredicted RBP11.18□□□□□ -0.62
TM9SF3-204ENST00000475401 CYP4X1Q8N118 509 aa11.18□□□□□ -0.62
TM9SF3-204ENST00000475401 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
TM9SF3-204ENST00000475401 VASH1Q7L8A9 365 aaPredicted RBP11.17□□□□□ -0.62
TM9SF3-204ENST00000475401 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
TM9SF3-204ENST00000475401 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
TM9SF3-204ENST00000475401 CALR3Q96L12 384 aaKnown RBP11.16□□□□□ -0.62
TM9SF3-204ENST00000475401 PKD2L1Q9P0L9 805 aa11.16□□□□□ -0.62
TM9SF3-204ENST00000475401 POM121CA8CG34 1229 aa11.15□□□□□ -0.62
TM9SF3-204ENST00000475401 MPNDQ8N594 471 aa11.15□□□□□ -0.62
TM9SF3-204ENST00000475401 MAP4K5Q9Y4K4 846 aa11.15□□□□□ -0.62
TM9SF3-204ENST00000475401 GDF9O60383 454 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 PRR20EP86478 221 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 PRR20CP86479 221 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 PRR20DP86480 221 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 PRR20BP86481 221 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 PRR20AP86496 221 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 HDGFL1Q5TGJ6 251 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 GLMNQ92990 594 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
TM9SF3-204ENST00000475401 SIAH2O43255 324 aa11.13□□□□□ -0.63
TM9SF3-204ENST00000475401 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
TM9SF3-204ENST00000475401 TRIM52Q96A61 297 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms