RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 ITSN1Q15811 1721 aa12.96□□□□□ -0.33
SPTAN1-206ENST00000475367 FBLN1P23142 703 aa12.96□□□□□ -0.33
SPTAN1-206ENST00000475367 MYT1Q01538 1121 aa12.96□□□□□ -0.33
SPTAN1-206ENST00000475367 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
SPTAN1-206ENST00000475367 U2AF1L5P0DN76 240 aaPredicted RBP12.96□□□□□ -0.34
SPTAN1-206ENST00000475367 U2AF1Q01081 240 aaKnown RBP eCLIP12.96□□□□□ -0.34
SPTAN1-206ENST00000475367 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 POLKQ9UBT6 870 aa12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 RCAN3Q9UKA8 241 aa12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
SPTAN1-206ENST00000475367 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
SPTAN1-206ENST00000475367 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
SPTAN1-206ENST00000475367 COG3Q96JB2 828 aa12.94□□□□□ -0.34
SPTAN1-206ENST00000475367 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
SPTAN1-206ENST00000475367 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-206ENST00000475367 PNPLA6Q8IY17 1366 aa12.93□□□□□ -0.34
SPTAN1-206ENST00000475367 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
SPTAN1-206ENST00000475367 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
SPTAN1-206ENST00000475367 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
SPTAN1-206ENST00000475367 USP6P35125 1406 aa12.93□□□□□ -0.34
SPTAN1-206ENST00000475367 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
SPTAN1-206ENST00000475367 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-206ENST00000475367 RRP7AQ9Y3A4 280 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-206ENST00000475367 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
SPTAN1-206ENST00000475367 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
SPTAN1-206ENST00000475367 ANKARQ7Z5J8 1434 aa12.92□□□□□ -0.34
SPTAN1-206ENST00000475367 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
SPTAN1-206ENST00000475367 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
SPTAN1-206ENST00000475367 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
SPTAN1-206ENST00000475367 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 PPP4R2Q9NY27 417 aa12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 NRKQ7Z2Y5 1582 aa12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-206ENST00000475367 FMN2Q9NZ56 1722 aa12.89□□□□□ -0.35
SPTAN1-206ENST00000475367 E9PSI1 815 aa12.89□□□□□ -0.35
SPTAN1-206ENST00000475367 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-206ENST00000475367 PLEKHF1Q96S99 279 aa12.89□□□□□ -0.35
SPTAN1-206ENST00000475367 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
SPTAN1-206ENST00000475367 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
SPTAN1-206ENST00000475367 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
SPTAN1-206ENST00000475367 OVOS2A0A0J9YW53 1432 aa12.87□□□□□ -0.35
SPTAN1-206ENST00000475367 OVOS2Q6IE36 1432 aa12.87□□□□□ -0.35
SPTAN1-206ENST00000475367 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
SPTAN1-206ENST00000475367 CCDC27Q2M243 656 aa12.86□□□□□ -0.35
SPTAN1-206ENST00000475367 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
SPTAN1-206ENST00000475367 ADGRL3Q9HAR2 1447 aa12.86□□□□□ -0.35
SPTAN1-206ENST00000475367 IL13P35225 146 aa12.86□□□□□ -0.35
SPTAN1-206ENST00000475367 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
SPTAN1-206ENST00000475367 MAPK8IP3Q9UPT6 1336 aa12.85□□□□□ -0.35
SPTAN1-206ENST00000475367 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-206ENST00000475367 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
SPTAN1-206ENST00000475367 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
SPTAN1-206ENST00000475367 FCHSD2O94868 740 aa12.85□□□□□ -0.35
SPTAN1-206ENST00000475367 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
SPTAN1-206ENST00000475367 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
SPTAN1-206ENST00000475367 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
SPTAN1-206ENST00000475367 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
SPTAN1-206ENST00000475367 SOX12O15370 315 aa12.84□□□□□ -0.35
SPTAN1-206ENST00000475367 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
SPTAN1-206ENST00000475367 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
SPTAN1-206ENST00000475367 PLIN1O60240 522 aa12.83□□□□□ -0.36
SPTAN1-206ENST00000475367 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
SPTAN1-206ENST00000475367 HSPA2P54652 639 aa12.83□□□□□ -0.36
SPTAN1-206ENST00000475367 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
SPTAN1-206ENST00000475367 HMOX1P09601 288 aa12.82□□□□□ -0.36
SPTAN1-206ENST00000475367 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
SPTAN1-206ENST00000475367 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 NLRP6P59044 892 aa12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 RIPK4P57078 832 aa12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 NUTM2GQ5VZR2 741 aa12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 PIK3C2AO00443 1686 aa12.81□□□□□ -0.36
SPTAN1-206ENST00000475367 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 EXOC6Q8TAG9 804 aa12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 MAP3K19Q56UN5 1328 aa12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 NEFMP07197 916 aa12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
SPTAN1-206ENST00000475367 PSME1Q06323 249 aa12.79□□□□□ -0.36
SPTAN1-206ENST00000475367 MYH16Q9H6N6 1097 aa12.79□□□□□ -0.36
SPTAN1-206ENST00000475367 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
SPTAN1-206ENST00000475367 ORAI2Q96SN7 254 aa12.78□□□□□ -0.36
SPTAN1-206ENST00000475367 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
SPTAN1-206ENST00000475367 C19orf44Q9H6X5 657 aa12.78□□□□□ -0.36
SPTAN1-206ENST00000475367 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.36
SPTAN1-206ENST00000475367 BCAR3O75815 825 aa12.77□□□□□ -0.37
SPTAN1-206ENST00000475367 CCDC136Q96JN2 1154 aa12.77□□□□□ -0.37
SPTAN1-206ENST00000475367 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms