RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 TRIM34Q9BYJ4 488 aa8.48□□□□□ -1.05
RPSA-205ENST00000475346 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
RPSA-205ENST00000475346 GPR37L1O60883 481 aa8.47□□□□□ -1.05
RPSA-205ENST00000475346 FDX1P10109 184 aa8.47□□□□□ -1.05
RPSA-205ENST00000475346 ALG2Q9H553 416 aa8.47□□□□□ -1.05
RPSA-205ENST00000475346 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
RPSA-205ENST00000475346 TLL1O43897 1013 aa8.46□□□□□ -1.06
RPSA-205ENST00000475346 SND1Q7KZF4 910 aaKnown RBP eCLIP8.46□□□□□ -1.06
RPSA-205ENST00000475346 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
RPSA-205ENST00000475346 HOXA2O43364 376 aa8.45□□□□□ -1.06
RPSA-205ENST00000475346 ZPR1O75312 459 aa8.45□□□□□ -1.06
RPSA-205ENST00000475346 GUCA2AQ02747 115 aa8.45□□□□□ -1.06
RPSA-205ENST00000475346 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
RPSA-205ENST00000475346 LRRN4Q8WUT4 740 aa8.45□□□□□ -1.06
RPSA-205ENST00000475346 FUT2Q10981 343 aa8.44□□□□□ -1.06
RPSA-205ENST00000475346 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
RPSA-205ENST00000475346 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
RPSA-205ENST00000475346 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
RPSA-205ENST00000475346 GCGRP47871 477 aa8.43□□□□□ -1.06
RPSA-205ENST00000475346 USP46P62068 366 aa8.43□□□□□ -1.06
RPSA-205ENST00000475346 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
RPSA-205ENST00000475346 HLA-CQ95604 372 aa8.43□□□□□ -1.06
RPSA-205ENST00000475346 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
RPSA-205ENST00000475346 NR1I2O75469 434 aa8.42□□□□□ -1.06
RPSA-205ENST00000475346 ATG7O95352 703 aa8.42□□□□□ -1.06
RPSA-205ENST00000475346 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
RPSA-205ENST00000475346 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
RPSA-205ENST00000475346 AMOTL2Q9Y2J4 779 aa8.42□□□□□ -1.06
RPSA-205ENST00000475346 SEMA3FQ13275 785 aa8.41□□□□□ -1.06
RPSA-205ENST00000475346 MTMR2Q13614 643 aa8.41□□□□□ -1.06
RPSA-205ENST00000475346 MAFBQ9Y5Q3 323 aaPredicted RBP8.41□□□□□ -1.06
RPSA-205ENST00000475346 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
RPSA-205ENST00000475346 CFAP99D6REC4 459 aa8.39□□□□□ -1.07
RPSA-205ENST00000475346 SOX11P35716 441 aa8.39□□□□□ -1.07
RPSA-205ENST00000475346 ATP6V1AP38606 617 aa8.39□□□□□ -1.07
RPSA-205ENST00000475346 TBC1D9Q6ZT07 1266 aa8.39□□□□□ -1.07
RPSA-205ENST00000475346 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.39□□□□□ -1.07
RPSA-205ENST00000475346 C6orf229H3BNL8 230 aa8.38□□□□□ -1.07
RPSA-205ENST00000475346 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
RPSA-205ENST00000475346 GGCXP38435 758 aa8.38□□□□□ -1.07
RPSA-205ENST00000475346 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
RPSA-205ENST00000475346 S1PR4O95977 384 aa8.37□□□□□ -1.07
RPSA-205ENST00000475346 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
RPSA-205ENST00000475346 MORN1Q5T089 497 aa8.37□□□□□ -1.07
RPSA-205ENST00000475346 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
RPSA-205ENST00000475346 NR6A1Q15406 480 aa8.36□□□□□ -1.07
RPSA-205ENST00000475346 B4GALNT3Q6L9W6 998 aa8.36□□□□□ -1.07
RPSA-205ENST00000475346 SPSB2Q99619 263 aa8.36□□□□□ -1.07
RPSA-205ENST00000475346 ATP9BO43861 1147 aa8.35□□□□□ -1.07
RPSA-205ENST00000475346 ADH1BP00325 375 aa8.35□□□□□ -1.07
RPSA-205ENST00000475346 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
RPSA-205ENST00000475346 PNMA1Q8ND90 353 aa8.34□□□□□ -1.07
RPSA-205ENST00000475346 PRKD2Q9BZL6 878 aa8.34□□□□□ -1.07
RPSA-205ENST00000475346 SLC6A16Q9GZN6 736 aa8.34□□□□□ -1.07
RPSA-205ENST00000475346 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
RPSA-205ENST00000475346 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
RPSA-205ENST00000475346 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 RNF19BQ6ZMZ0 732 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 STK32AQ8WU08 396 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
RPSA-205ENST00000475346 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
RPSA-205ENST00000475346 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
RPSA-205ENST00000475346 CCER1Q8TC90 406 aaPredicted RBP8.31□□□□□ -1.08
RPSA-205ENST00000475346 RGS20O76081 388 aa8.3□□□□□ -1.08
RPSA-205ENST00000475346 KANK4Q5T7N3 995 aaPredicted RBP8.3□□□□□ -1.08
RPSA-205ENST00000475346 PRDM9Q9NQV7 894 aa8.3□□□□□ -1.08
RPSA-205ENST00000475346 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
RPSA-205ENST00000475346 PIK3CDO00329 1044 aa8.29□□□□□ -1.08
RPSA-205ENST00000475346 ELOAQ14241 798 aaKnown RBP8.28□□□□□ -1.08
RPSA-205ENST00000475346 Q3C1V9 767 aa8.28□□□□□ -1.08
RPSA-205ENST00000475346 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
RPSA-205ENST00000475346 THAP11Q96EK4 314 aa8.28□□□□□ -1.08
RPSA-205ENST00000475346 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
RPSA-205ENST00000475346 USP17L3A6NCW0 530 aa8.27□□□□□ -1.09
RPSA-205ENST00000475346 USP17L4A6NCW7 530 aa8.27□□□□□ -1.09
RPSA-205ENST00000475346 NR1H3Q13133 447 aa8.27□□□□□ -1.09
RPSA-205ENST00000475346 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
RPSA-205ENST00000475346 USP17L1Q7RTZ2 530 aa8.27□□□□□ -1.09
RPSA-205ENST00000475346 TXNDC2Q86VQ3 553 aa8.27□□□□□ -1.09
RPSA-205ENST00000475346 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
RPSA-205ENST00000475346 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
RPSA-205ENST00000475346 FBXO45P0C2W1 286 aa8.26□□□□□ -1.09
RPSA-205ENST00000475346 SKIP12755 728 aa8.26□□□□□ -1.09
RPSA-205ENST00000475346 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
RPSA-205ENST00000475346 ANKLE1Q8NAG6 615 aa8.26□□□□□ -1.09
RPSA-205ENST00000475346 USP17L5A8MUK1 530 aa8.25□□□□□ -1.09
RPSA-205ENST00000475346 SLC19A1P41440 591 aa8.25□□□□□ -1.09
RPSA-205ENST00000475346 DEPDC4Q8N2C3 294 aa8.25□□□□□ -1.09
RPSA-205ENST00000475346 FCF1Q9Y324 198 aaKnown RBP8.25□□□□□ -1.09
RPSA-205ENST00000475346 PLA2G2CQ5R387 149 aa8.24□□□□□ -1.09
RPSA-205ENST00000475346 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
RPSA-205ENST00000475346 USB1Q9BQ65 265 aaKnown RBP8.24□□□□□ -1.09
RPSA-205ENST00000475346 ARID4AP29374 1257 aaPredicted RBP8.23□□□□□ -1.09
RPSA-205ENST00000475346 ZBBXA8MT70 800 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms