RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-215ENST00000475319 TSR1Q2NL82 804 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-215ENST00000475319 XP32Q5T750 250 aa8.26□□□□□ -1.09
ECHDC1-215ENST00000475319 IRF7Q92985 503 aa8.26□□□□□ -1.09
ECHDC1-215ENST00000475319 KIFC2Q96AC6 838 aa8.26□□□□□ -1.09
ECHDC1-215ENST00000475319 ZNF330Q9Y3S2 320 aaPredicted RBP8.26□□□□□ -1.09
ECHDC1-215ENST00000475319 SLC4A3P48751 1232 aa8.25□□□□□ -1.09
ECHDC1-215ENST00000475319 CLK2P49760 499 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-215ENST00000475319 METTL3Q86U44 580 aaKnown RBP8.25□□□□□ -1.09
ECHDC1-215ENST00000475319 RFC5P40937 340 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 FBXO31Q5XUX0 539 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 TATDN2Q93075 761 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 YTHDC1Q96MU7 727 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 CHMP4AQ9BY43 222 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 ATP13A2Q9NQ11 1180 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 RBM19Q9Y4C8 960 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 PCDHB3Q9Y5E6 796 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 PNMA3Q9UL41 463 aa8.24□□□□□ -1.09
ECHDC1-215ENST00000475319 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
ECHDC1-215ENST00000475319 S1PR4O95977 384 aa8.22□□□□□ -1.09
ECHDC1-215ENST00000475319 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
ECHDC1-215ENST00000475319 TBC1D2Q9BYX2 928 aa8.22□□□□□ -1.09
ECHDC1-215ENST00000475319 OATP04181 439 aa8.21□□□□□ -1.1
ECHDC1-215ENST00000475319 IRF5Q13568 498 aa8.21□□□□□ -1.1
ECHDC1-215ENST00000475319 NXF1Q9UBU9 619 aaKnown RBP8.21□□□□□ -1.1
ECHDC1-215ENST00000475319 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
ECHDC1-215ENST00000475319 PXYLP1Q8TE99 480 aa8.2□□□□□ -1.1
ECHDC1-215ENST00000475319 NAP1L5Q96NT1 182 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-215ENST00000475319 GDPD2Q9HCC8 539 aa8.2□□□□□ -1.1
ECHDC1-215ENST00000475319 PRSS12P56730 875 aa8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 PADI6Q6TGC4 694 aa8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 BCCIPQ9P287 314 aaKnown RBP eCLIP8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 LIMD1Q9UGP4 676 aa8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 ADGRG1Q9Y653 693 aa8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
ECHDC1-215ENST00000475319 HSP90B1P14625 803 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-215ENST00000475319 TMCO4Q5TGY1 634 aa8.18□□□□□ -1.1
ECHDC1-215ENST00000475319 RGS22Q8NE09 1264 aa8.18□□□□□ -1.1
ECHDC1-215ENST00000475319 CERKQ8TCT0 537 aa8.18□□□□□ -1.1
ECHDC1-215ENST00000475319 GZF1Q9H116 711 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-215ENST00000475319 PPP2R2DQ66LE6 453 aa8.17□□□□□ -1.1
ECHDC1-215ENST00000475319 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
ECHDC1-215ENST00000475319 CALR3Q96L12 384 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-215ENST00000475319 GDF11O95390 407 aa8.16□□□□□ -1.1
ECHDC1-215ENST00000475319 DIXDC1Q155Q3 683 aa8.16□□□□□ -1.1
ECHDC1-215ENST00000475319 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-215ENST00000475319 TLL1O43897 1013 aa8.15□□□□□ -1.1
ECHDC1-215ENST00000475319 PPP1R15AO75807 674 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-215ENST00000475319 ABL2P42684 1182 aa8.15□□□□□ -1.1
ECHDC1-215ENST00000475319 RIC3Q7Z5B4 369 aa8.15□□□□□ -1.1
ECHDC1-215ENST00000475319 MTMR7Q9Y216 660 aa8.15□□□□□ -1.1
ECHDC1-215ENST00000475319 POM121CA8CG34 1229 aa8.14□□□□□ -1.11
ECHDC1-215ENST00000475319 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-215ENST00000475319 CDK11BP21127 795 aaKnown RBP8.14□□□□□ -1.11
ECHDC1-215ENST00000475319 RPIAP49247 311 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 MFAP1P55081 439 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 WWC1Q8IX03 1113 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 SPIRE2Q8WWL2 714 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 GLMNQ92990 594 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 LOC105371045A0A1W2PR82 267 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 PLA2G2CQ5R387 149 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 NUDT18Q6ZVK8 323 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
ECHDC1-215ENST00000475319 ADH1BP00325 375 aa8.12□□□□□ -1.11
ECHDC1-215ENST00000475319 GSK3AP49840 483 aa8.12□□□□□ -1.11
ECHDC1-215ENST00000475319 IGHA1P01876 353 aa8.11□□□□□ -1.11
ECHDC1-215ENST00000475319 RASSF7Q02833 373 aa8.11□□□□□ -1.11
ECHDC1-215ENST00000475319 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
ECHDC1-215ENST00000475319 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
ECHDC1-215ENST00000475319 RRP9O43818 475 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-215ENST00000475319 IPO4Q8TEX9 1081 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-215ENST00000475319 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
ECHDC1-215ENST00000475319 ERCC6Q03468 1493 aa8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 SPTLC1O15269 473 aa8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 QPCTQ16769 361 aa8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 TUSC1Q2TAM9 212 aa8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 RTL5Q5HYW3 569 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 RBM46Q8TBY0 533 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 NAP1L2Q9ULW6 460 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-215ENST00000475319 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 C3orf80F5H4A9 247 aa8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 AP1G2O75843 785 aa8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 RSBN1LQ6PCB5 846 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 PRM3Q9NNZ6 103 aa8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 SOCS7O14512 581 aa8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 CD46P15529 392 aa8.08□□□□□ -1.12
ECHDC1-215ENST00000475319 ZNF428Q96B54 188 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms