RNA–Protein interactions for RNA: ENST00000475045.6

RUNX1-214, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-214ENST00000475045 TRPM3Q9HCF6 1732 aaPredicted RBP16.78■□□□□ 0.28
RUNX1-214ENST00000475045 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.28
RUNX1-214ENST00000475045 NRAPQ86VF7 1730 aa16.77■□□□□ 0.28
RUNX1-214ENST00000475045 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.27
RUNX1-214ENST00000475045 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
RUNX1-214ENST00000475045 PRDM11Q9NQV5 511 aa16.76■□□□□ 0.27
RUNX1-214ENST00000475045 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
RUNX1-214ENST00000475045 SPATA31A5Q5VU36 1347 aa16.75■□□□□ 0.27
RUNX1-214ENST00000475045 SPATA31A7Q8IWB4 1347 aa16.75■□□□□ 0.27
RUNX1-214ENST00000475045 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
RUNX1-214ENST00000475045 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
RUNX1-214ENST00000475045 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
RUNX1-214ENST00000475045 NUTM2GQ5VZR2 741 aa16.74■□□□□ 0.27
RUNX1-214ENST00000475045 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
RUNX1-214ENST00000475045 HRCP23327 699 aa16.72■□□□□ 0.27
RUNX1-214ENST00000475045 KIAA0232Q92628 1395 aa16.72■□□□□ 0.27
RUNX1-214ENST00000475045 R3HDM1Q15032 1099 aaKnown RBP16.72■□□□□ 0.27
RUNX1-214ENST00000475045 NUDT16Q96DE0 195 aaKnown RBP16.72■□□□□ 0.27
RUNX1-214ENST00000475045 ZC3H6P61129 1189 aaKnown RBP16.71■□□□□ 0.27
RUNX1-214ENST00000475045 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
RUNX1-214ENST00000475045 LRP5O75197 1615 aa16.69■□□□□ 0.26
RUNX1-214ENST00000475045 ATP7BP35670 1465 aa16.69■□□□□ 0.26
RUNX1-214ENST00000475045 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
RUNX1-214ENST00000475045 EZH2Q15910 746 aaKnown RBP16.68■□□□□ 0.26
RUNX1-214ENST00000475045 CRYBG1Q9Y4K1 1723 aa16.68■□□□□ 0.26
RUNX1-214ENST00000475045 TRIM37O94972 964 aa16.68■□□□□ 0.26
RUNX1-214ENST00000475045 CDK19Q9BWU1 502 aa16.68■□□□□ 0.26
RUNX1-214ENST00000475045 THSD7AQ9UPZ6 1657 aa16.67■□□□□ 0.26
RUNX1-214ENST00000475045 RGPD1P0DJD0 1748 aa16.66■□□□□ 0.26
RUNX1-214ENST00000475045 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
RUNX1-214ENST00000475045 ACEP12821 1306 aa16.65■□□□□ 0.26
RUNX1-214ENST00000475045 EVA1CP58658 441 aa16.64■□□□□ 0.25
RUNX1-214ENST00000475045 APBA3O96018 575 aa16.64■□□□□ 0.25
RUNX1-214ENST00000475045 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
RUNX1-214ENST00000475045 TNS1Q9HBL0 1735 aaKnown RBP16.63■□□□□ 0.25
RUNX1-214ENST00000475045 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
RUNX1-214ENST00000475045 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
RUNX1-214ENST00000475045 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
RUNX1-214ENST00000475045 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
RUNX1-214ENST00000475045 CAMKK2Q96RR4 588 aa16.62■□□□□ 0.25
RUNX1-214ENST00000475045 ITSN1Q15811 1721 aa16.62■□□□□ 0.25
RUNX1-214ENST00000475045 SSH2Q76I76 1423 aa16.62■□□□□ 0.25
RUNX1-214ENST00000475045 ZBTB7CA1YPR0 619 aa16.61■□□□□ 0.25
RUNX1-214ENST00000475045 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
RUNX1-214ENST00000475045 ABTB2Q8N961 1025 aa16.61■□□□□ 0.25
RUNX1-214ENST00000475045 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
RUNX1-214ENST00000475045 STAC3Q96MF2 364 aa16.6■□□□□ 0.25
RUNX1-214ENST00000475045 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
RUNX1-214ENST00000475045 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
RUNX1-214ENST00000475045 CAMTA1Q9Y6Y1 1673 aa16.58■□□□□ 0.25
RUNX1-214ENST00000475045 NRKQ7Z2Y5 1582 aa16.58■□□□□ 0.24
RUNX1-214ENST00000475045 SRPK2P78362 688 aaKnown RBP16.58■□□□□ 0.24
RUNX1-214ENST00000475045 TOPAZ1Q8N9V7 1692 aa16.58■□□□□ 0.24
RUNX1-214ENST00000475045 PLEKHG3A1L390 1219 aa16.57■□□□□ 0.24
RUNX1-214ENST00000475045 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
RUNX1-214ENST00000475045 TCP11L2Q8N4U5 519 aa16.57■□□□□ 0.24
RUNX1-214ENST00000475045 CABP2Q9NPB3 220 aa16.57■□□□□ 0.24
RUNX1-214ENST00000475045 USP19O94966 1318 aa16.55■□□□□ 0.24
RUNX1-214ENST00000475045 PPIP5K1Q6PFW1 1433 aa16.55■□□□□ 0.24
RUNX1-214ENST00000475045 GCP02774 474 aa16.55■□□□□ 0.24
RUNX1-214ENST00000475045 CPDO75976 1380 aa16.54■□□□□ 0.24
RUNX1-214ENST00000475045 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
RUNX1-214ENST00000475045 CENPJQ9HC77 1338 aaPredicted RBP16.52■□□□□ 0.24
RUNX1-214ENST00000475045 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
RUNX1-214ENST00000475045 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.24
RUNX1-214ENST00000475045 COL5A2P05997 1499 aaPredicted RBP16.51■□□□□ 0.23
RUNX1-214ENST00000475045 NBPF14Q5TI25 921 aa16.51■□□□□ 0.23
RUNX1-214ENST00000475045 CABP1Q9NZU7 370 aa16.51■□□□□ 0.23
RUNX1-214ENST00000475045 NLRP6P59044 892 aa16.5■□□□□ 0.23
RUNX1-214ENST00000475045 NUP188Q5SRE5 1749 aa16.49■□□□□ 0.23
RUNX1-214ENST00000475045 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
RUNX1-214ENST00000475045 RREB1Q92766 1687 aa16.49■□□□□ 0.23
RUNX1-214ENST00000475045 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
RUNX1-214ENST00000475045 CRB1P82279 1406 aa16.48■□□□□ 0.23
RUNX1-214ENST00000475045 SOX12O15370 315 aa16.47■□□□□ 0.23
RUNX1-214ENST00000475045 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
RUNX1-214ENST00000475045 PTF1AQ7RTS3 328 aa16.47■□□□□ 0.23
RUNX1-214ENST00000475045 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
RUNX1-214ENST00000475045 USP6P35125 1406 aa16.46■□□□□ 0.23
RUNX1-214ENST00000475045 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
RUNX1-214ENST00000475045 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
RUNX1-214ENST00000475045 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
RUNX1-214ENST00000475045 PARP4Q9UKK3 1724 aaKnown RBP16.44■□□□□ 0.22
RUNX1-214ENST00000475045 DDB1Q16531 1140 aa16.44■□□□□ 0.22
RUNX1-214ENST00000475045 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
RUNX1-214ENST00000475045 AXIN2Q9Y2T1 843 aa16.44■□□□□ 0.22
RUNX1-214ENST00000475045 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
RUNX1-214ENST00000475045 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
RUNX1-214ENST00000475045 KCNQ2O43526 872 aa16.43■□□□□ 0.22
RUNX1-214ENST00000475045 YY1P25490 414 aa16.43■□□□□ 0.22
RUNX1-214ENST00000475045 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
RUNX1-214ENST00000475045 SLIT3O75094 1523 aa16.43■□□□□ 0.22
RUNX1-214ENST00000475045 LRRC37A3O60309 1634 aa16.43■□□□□ 0.22
RUNX1-214ENST00000475045 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
RUNX1-214ENST00000475045 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
RUNX1-214ENST00000475045 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
RUNX1-214ENST00000475045 L3MBTL2Q969R5 705 aa16.41■□□□□ 0.22
RUNX1-214ENST00000475045 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
RUNX1-214ENST00000475045 PEAK1Q9H792 1746 aa16.41■□□□□ 0.22
RUNX1-214ENST00000475045 EVC2Q86UK5 1308 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms