RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 ARHGEF10O15013 1369 aa10.26□□□□□ -0.77
LSAMP-203ENST00000474851 ATP7BP35670 1465 aa10.25□□□□□ -0.77
LSAMP-203ENST00000474851 UNC5CLQ8IV45 518 aa10.25□□□□□ -0.77
LSAMP-203ENST00000474851 CARD11Q9BXL7 1154 aa10.25□□□□□ -0.77
LSAMP-203ENST00000474851 TONSLQ96HA7 1378 aa10.25□□□□□ -0.77
LSAMP-203ENST00000474851 FMN2Q9NZ56 1722 aa10.24□□□□□ -0.77
LSAMP-203ENST00000474851 PAK3O75914 559 aaPredicted RBP10.24□□□□□ -0.77
LSAMP-203ENST00000474851 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
LSAMP-203ENST00000474851 USP32Q8NFA0 1604 aa10.23□□□□□ -0.77
LSAMP-203ENST00000474851 GJD4Q96KN9 370 aaPredicted RBP10.23□□□□□ -0.77
LSAMP-203ENST00000474851 EVC2Q86UK5 1308 aa10.23□□□□□ -0.77
LSAMP-203ENST00000474851 ATRNO75882 1429 aa10.23□□□□□ -0.77
LSAMP-203ENST00000474851 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.77
LSAMP-203ENST00000474851 SLIT2O94813 1529 aa10.22□□□□□ -0.77
LSAMP-203ENST00000474851 HAP1P54257 671 aaPredicted RBP10.21□□□□□ -0.77
LSAMP-203ENST00000474851 NUTM2GQ5VZR2 741 aa10.21□□□□□ -0.77
LSAMP-203ENST00000474851 SPINK5Q9NQ38 1064 aaPredicted RBP10.21□□□□□ -0.77
LSAMP-203ENST00000474851 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
LSAMP-203ENST00000474851 COL22A1Q8NFW1 1626 aaPredicted RBP10.21□□□□□ -0.78
LSAMP-203ENST00000474851 ONECUT3O60422 494 aaPredicted RBP10.2□□□□□ -0.78
LSAMP-203ENST00000474851 VPS72Q15906 364 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 PPIP5K1Q6PFW1 1433 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 TESK2Q96S53 571 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 CLSPNQ9HAW4 1339 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 KIAA1210Q9ULL0 1709 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 TIMELESSQ9UNS1 1208 aa10.2□□□□□ -0.78
LSAMP-203ENST00000474851 KIF1AQ12756 1690 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 RGS12O14924 1447 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 SSH2Q76I76 1423 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 ST20-MTHFSA0A0A6YYL1 179 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 DSG3P32926 999 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-203ENST00000474851 BTG4Q9NY30 223 aa10.19□□□□□ -0.78
LSAMP-203ENST00000474851 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
LSAMP-203ENST00000474851 GCP02774 474 aa10.18□□□□□ -0.78
LSAMP-203ENST00000474851 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
LSAMP-203ENST00000474851 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
LSAMP-203ENST00000474851 ARHGEF28Q8N1W1 1705 aaKnown RBP10.18□□□□□ -0.78
LSAMP-203ENST00000474851 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
LSAMP-203ENST00000474851 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
LSAMP-203ENST00000474851 USP19O94966 1318 aa10.17□□□□□ -0.78
LSAMP-203ENST00000474851 CHRNA2Q15822 529 aa10.17□□□□□ -0.78
LSAMP-203ENST00000474851 NLRP13Q86W25 1043 aa10.17□□□□□ -0.78
LSAMP-203ENST00000474851 SLC12A5Q9H2X9 1139 aa10.17□□□□□ -0.78
LSAMP-203ENST00000474851 PRDM11Q9NQV5 511 aa10.17□□□□□ -0.78
LSAMP-203ENST00000474851 KIAA0232Q92628 1395 aa10.16□□□□□ -0.78
LSAMP-203ENST00000474851 TTC21BQ7Z4L5 1316 aa10.16□□□□□ -0.78
LSAMP-203ENST00000474851 TRPM1Q7Z4N2 1603 aa10.16□□□□□ -0.78
LSAMP-203ENST00000474851 USP6P35125 1406 aa10.16□□□□□ -0.78
LSAMP-203ENST00000474851 CPSF1Q10570 1443 aaKnown RBP10.16□□□□□ -0.78
LSAMP-203ENST00000474851 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
LSAMP-203ENST00000474851 CAPN15O75808 1086 aa10.15□□□□□ -0.78
LSAMP-203ENST00000474851 NLRP6P59044 892 aa10.15□□□□□ -0.78
LSAMP-203ENST00000474851 SEPT12Q8IYM1 358 aa10.15□□□□□ -0.78
LSAMP-203ENST00000474851 CPDO75976 1380 aa10.14□□□□□ -0.79
LSAMP-203ENST00000474851 SPATA31A5Q5VU36 1347 aa10.13□□□□□ -0.79
LSAMP-203ENST00000474851 SPATA31A7Q8IWB4 1347 aa10.13□□□□□ -0.79
LSAMP-203ENST00000474851 TMC1Q8TDI8 760 aa10.13□□□□□ -0.79
LSAMP-203ENST00000474851 CCDC9Q9Y3X0 531 aaKnown RBP10.13□□□□□ -0.79
LSAMP-203ENST00000474851 TRPM3Q9HCF6 1732 aaPredicted RBP10.13□□□□□ -0.79
LSAMP-203ENST00000474851 SLC24A1O60721 1099 aa10.12□□□□□ -0.79
LSAMP-203ENST00000474851 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
LSAMP-203ENST00000474851 CCER1Q8TC90 406 aaPredicted RBP10.12□□□□□ -0.79
LSAMP-203ENST00000474851 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
LSAMP-203ENST00000474851 RGPD8O14715 1765 aaPredicted RBP10.11□□□□□ -0.79
LSAMP-203ENST00000474851 SPATA31A1Q5TZJ5 1347 aa10.11□□□□□ -0.79
LSAMP-203ENST00000474851 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
LSAMP-203ENST00000474851 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
LSAMP-203ENST00000474851 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
LSAMP-203ENST00000474851 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
LSAMP-203ENST00000474851 KTN1Q86UP2 1357 aaKnown RBP10.11□□□□□ -0.79
LSAMP-203ENST00000474851 USP47Q96K76 1375 aa10.11□□□□□ -0.79
LSAMP-203ENST00000474851 CD163L1Q9NR16 1453 aa10.1□□□□□ -0.79
LSAMP-203ENST00000474851 ALS2Q96Q42 1657 aa10.1□□□□□ -0.79
LSAMP-203ENST00000474851 EVA1CP58658 441 aa10.1□□□□□ -0.79
LSAMP-203ENST00000474851 NME9Q86XW9 330 aa10.1□□□□□ -0.79
LSAMP-203ENST00000474851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSAMP-203ENST00000474851 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
LSAMP-203ENST00000474851 KRT27Q7Z3Y8 459 aa10.09□□□□□ -0.79
LSAMP-203ENST00000474851 HDGFL2Q7Z4V5 671 aaPredicted RBP10.09□□□□□ -0.79
LSAMP-203ENST00000474851 TERF2IPQ9NYB0 399 aa10.09□□□□□ -0.79
LSAMP-203ENST00000474851 AATKQ6ZMQ8 1374 aa10.09□□□□□ -0.79
LSAMP-203ENST00000474851 USP31Q70CQ4 1352 aa10.09□□□□□ -0.79
LSAMP-203ENST00000474851 GLI3P10071 1580 aa10.09□□□□□ -0.79
LSAMP-203ENST00000474851 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
LSAMP-203ENST00000474851 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
LSAMP-203ENST00000474851 TMF1P82094 1093 aa10.08□□□□□ -0.8
LSAMP-203ENST00000474851 BARGINQ6ZT62 677 aa10.08□□□□□ -0.8
LSAMP-203ENST00000474851 CCDC125Q86Z20 511 aa10.08□□□□□ -0.8
LSAMP-203ENST00000474851 KCNH5Q8NCM2 988 aa10.08□□□□□ -0.8
LSAMP-203ENST00000474851 A0A1W2PP64 1363 aa10.08□□□□□ -0.8
LSAMP-203ENST00000474851 CAMTA1Q9Y6Y1 1673 aa10.07□□□□□ -0.8
LSAMP-203ENST00000474851 SOX12O15370 315 aa10.07□□□□□ -0.8
LSAMP-203ENST00000474851 TCP11L2Q8N4U5 519 aa10.07□□□□□ -0.8
LSAMP-203ENST00000474851 USP35Q9P2H5 1018 aa10.07□□□□□ -0.8
LSAMP-203ENST00000474851 QRICH2Q9H0J4 1663 aa10.06□□□□□ -0.8
LSAMP-203ENST00000474851 FAM182BQ5T319 152 aa10.06□□□□□ -0.8
LSAMP-203ENST00000474851 EP400Q96L91 3159 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms