RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 C8orf37Q96NL8 207 aa8.15□□□□□ -1.1
SMARCE1-208ENST00000474246 COL16A1Q07092 1604 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-208ENST00000474246 CAMTA1Q9Y6Y1 1673 aa8.15□□□□□ -1.1
SMARCE1-208ENST00000474246 UNC13BO14795 1591 aa8.15□□□□□ -1.1
SMARCE1-208ENST00000474246 FAM50AQ14320 339 aaKnown RBP8.15□□□□□ -1.11
SMARCE1-208ENST00000474246 SPATA32Q96LK8 384 aa8.15□□□□□ -1.11
SMARCE1-208ENST00000474246 ATP10BO94823 1461 aa8.15□□□□□ -1.11
SMARCE1-208ENST00000474246 YTHDC1Q96MU7 727 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-208ENST00000474246 SPTY2D1Q68D10 685 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-208ENST00000474246 BARGINQ6ZT62 677 aa8.14□□□□□ -1.11
SMARCE1-208ENST00000474246 P3H3Q8IVL6 736 aa8.14□□□□□ -1.11
SMARCE1-208ENST00000474246 KCNG1Q9UIX4 513 aa8.14□□□□□ -1.11
SMARCE1-208ENST00000474246 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
SMARCE1-208ENST00000474246 TMEM106CQ9BVX2 250 aa8.13□□□□□ -1.11
SMARCE1-208ENST00000474246 MROH2AA6NES4 1674 aa8.13□□□□□ -1.11
SMARCE1-208ENST00000474246 KCNQ2O43526 872 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 BRD1O95696 1058 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 XIRP1Q702N8 1843 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 PHF14O94880 888 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 POTEIP0CG38 1075 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 FAM193AP78312 1265 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 IL27Q8NEV9 243 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 USP19O94966 1318 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 ARHGAP23Q9P227 1491 aa8.12□□□□□ -1.11
SMARCE1-208ENST00000474246 RGS19P49795 217 aa8.11□□□□□ -1.11
SMARCE1-208ENST00000474246 STRCP1A6NGW2 1772 aa8.11□□□□□ -1.11
SMARCE1-208ENST00000474246 DNMT1P26358 1616 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-208ENST00000474246 IRF5Q13568 498 aa8.1□□□□□ -1.11
SMARCE1-208ENST00000474246 SLAIN2Q9P270 581 aa8.1□□□□□ -1.11
SMARCE1-208ENST00000474246 DEPDC5O75140 1603 aa8.1□□□□□ -1.11
SMARCE1-208ENST00000474246 TRAK2O60296 914 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 PPP1R37O75864 691 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 REREQ9P2R6 1566 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 GALR2O43603 387 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 MARCH6O60337 910 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 GORABQ5T7V8 394 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 CADPS2Q86UW7 1296 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 THEMISQ8N1K5 641 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 FBXO22Q8NEZ5 403 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 SGSM3Q96HU1 749 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 USP21Q9UK80 565 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 KIF14Q15058 1648 aa8.09□□□□□ -1.11
SMARCE1-208ENST00000474246 TPD52L2O43399 206 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 CHMP4BQ9H444 224 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 KIAA1210Q9ULL0 1709 aa8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 SOX12O15370 315 aa8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 NLRP6P59044 892 aa8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 FLIIQ13045 1269 aa8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
SMARCE1-208ENST00000474246 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-208ENST00000474246 DISP1Q96F81 1524 aa8.07□□□□□ -1.12
SMARCE1-208ENST00000474246 CLGNO14967 610 aa8.07□□□□□ -1.12
SMARCE1-208ENST00000474246 GPBP1L1Q9HC44 474 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-208ENST00000474246 PPME1Q9Y570 386 aa8.06□□□□□ -1.12
SMARCE1-208ENST00000474246 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
SMARCE1-208ENST00000474246 IQGAP1P46940 1657 aa8.06□□□□□ -1.12
SMARCE1-208ENST00000474246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMARCE1-208ENST00000474246 ATRNO75882 1429 aa8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 POTEMA6NI47 508 aa8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 A6NJR5 290 aa8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 TTLL13PA6NNM8 815 aa8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 ZNF622Q969S3 477 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 TERF2IPQ9NYB0 399 aa8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 BMP2KQ9NSY1 1161 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-208ENST00000474246 SHANK3Q9BYB0 1731 aa8.04□□□□□ -1.12
SMARCE1-208ENST00000474246 MS4A4AQ96JQ5 239 aa8.04□□□□□ -1.12
SMARCE1-208ENST00000474246 ANKRD62A6NC57 917 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 HMGB1P1B2RPK0 211 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 PATL2C9JE40 543 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 TIE1P35590 1138 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 RBM27Q9P2N5 1060 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 MSH6P52701 1360 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 TMEM94Q12767 1356 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 ERCC3P19447 782 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 NBPF8Q3BBV2 869 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 FOXD4L6Q3SYB3 417 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 NBPF14Q5TI25 921 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 FOXD4L3Q6VB84 417 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
SMARCE1-208ENST00000474246 HSPA1AP0DMV8 641 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 HSPA1BP0DMV9 641 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 AHDC1Q5TGY3 1603 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 IQGAP2Q13576 1575 aa8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 ABCC3O15438 1527 aa8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 RALBP1Q15311 655 aa8.02□□□□□ -1.13
SMARCE1-208ENST00000474246 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
SMARCE1-208ENST00000474246 TRIM35Q9UPQ4 493 aa8.01□□□□□ -1.13
SMARCE1-208ENST00000474246 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
SMARCE1-208ENST00000474246 ABCC1P33527 1531 aa8.01□□□□□ -1.13
SMARCE1-208ENST00000474246 SPHKAPQ2M3C7 1700 aa8□□□□□ -1.13
SMARCE1-208ENST00000474246 NME8Q8N427 588 aa8□□□□□ -1.13
SMARCE1-208ENST00000474246 SERPINA10Q9UK55 444 aa8□□□□□ -1.13
SMARCE1-208ENST00000474246 CNGB1Q14028 1251 aaPredicted RBP8□□□□□ -1.13
SMARCE1-208ENST00000474246 FNBP4Q8N3X1 1017 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms