RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 EP400Q96L91 3159 aa30.03■■■□□ 2.4
ARF1-206ENST00000473949 BRWD3Q6RI45 1802 aa30.03■■■□□ 2.4
ARF1-206ENST00000473949 NBPF1Q3BBV0 1214 aa30■■■□□ 2.39
ARF1-206ENST00000473949 ZRANB1Q9UGI0 708 aa29.99■■■□□ 2.39
ARF1-206ENST00000473949 COL14A1Q05707 1796 aaKnown RBP29.99■■■□□ 2.39
ARF1-206ENST00000473949 BLMP54132 1417 aaPredicted RBP29.97■■■□□ 2.39
ARF1-206ENST00000473949 NRAPQ86VF7 1730 aa29.97■■■□□ 2.39
ARF1-206ENST00000473949 ONECUT3O60422 494 aaPredicted RBP29.96■■■□□ 2.39
ARF1-206ENST00000473949 SF3B2Q13435 895 aaKnown RBP29.96■■■□□ 2.39
ARF1-206ENST00000473949 KRT27Q7Z3Y8 459 aa29.96■■■□□ 2.39
ARF1-206ENST00000473949 PRDM11Q9NQV5 511 aa29.96■■■□□ 2.39
ARF1-206ENST00000473949 FAM98CQ17RN3 349 aaKnown RBP29.95■■■□□ 2.39
ARF1-206ENST00000473949 CCDC61Q9Y6R9 512 aa29.95■■■□□ 2.39
ARF1-206ENST00000473949 ACEP12821 1306 aa29.95■■■□□ 2.38
ARF1-206ENST00000473949 CRYBG1Q9Y4K1 1723 aa29.94■■■□□ 2.38
ARF1-206ENST00000473949 NUTM2GQ5VZR2 741 aa29.93■■■□□ 2.38
ARF1-206ENST00000473949 TOPAZ1Q8N9V7 1692 aa29.92■■■□□ 2.38
ARF1-206ENST00000473949 SRPK2P78362 688 aaKnown RBP29.91■■■□□ 2.38
ARF1-206ENST00000473949 NBPF8Q3BBV2 869 aa29.91■■■□□ 2.38
ARF1-206ENST00000473949 CENPJQ9HC77 1338 aaPredicted RBP29.91■■■□□ 2.38
ARF1-206ENST00000473949 POLR3AO14802 1390 aaPredicted RBP29.9■■■□□ 2.38
ARF1-206ENST00000473949 KIAA0232Q92628 1395 aa29.89■■■□□ 2.37
ARF1-206ENST00000473949 PLEKHG3A1L390 1219 aa29.88■■■□□ 2.37
ARF1-206ENST00000473949 CHRNA2Q15822 529 aa29.88■■■□□ 2.37
ARF1-206ENST00000473949 DEFB132Q7Z7B7 95 aa29.88■■■□□ 2.37
ARF1-206ENST00000473949 PHRF1Q9P1Y6 1649 aaKnown RBP29.87■■■□□ 2.37
ARF1-206ENST00000473949 ZC3H6P61129 1189 aaKnown RBP29.87■■■□□ 2.37
ARF1-206ENST00000473949 L3MBTL2Q969R5 705 aa29.87■■■□□ 2.37
ARF1-206ENST00000473949 SPATA31A5Q5VU36 1347 aa29.87■■■□□ 2.37
ARF1-206ENST00000473949 SPATA31A7Q8IWB4 1347 aa29.87■■■□□ 2.37
ARF1-206ENST00000473949 ABTB2Q8N961 1025 aa29.85■■■□□ 2.37
ARF1-206ENST00000473949 CABP2Q9NPB3 220 aa29.85■■■□□ 2.37
ARF1-206ENST00000473949 STRN4Q9NRL3 753 aa29.84■■■□□ 2.37
ARF1-206ENST00000473949 PPIP5K1Q6PFW1 1433 aa29.84■■■□□ 2.37
ARF1-206ENST00000473949 SIN3AQ96ST3 1273 aa29.83■■■□□ 2.37
ARF1-206ENST00000473949 QRICH2Q9H0J4 1663 aa29.82■■■□□ 2.36
ARF1-206ENST00000473949 NEUROD1Q13562 356 aa29.82■■■□□ 2.36
ARF1-206ENST00000473949 EVA1CP58658 441 aa29.78■■■□□ 2.36
ARF1-206ENST00000473949 SPATA31A1Q5TZJ5 1347 aa29.77■■■□□ 2.36
ARF1-206ENST00000473949 BAG6P46379 1132 aa29.77■■■□□ 2.36
ARF1-206ENST00000473949 FAM182BQ5T319 152 aa29.77■■■□□ 2.36
ARF1-206ENST00000473949 NRKQ7Z2Y5 1582 aa29.75■■■□□ 2.35
ARF1-206ENST00000473949 NLRP13Q86W25 1043 aa29.75■■■□□ 2.35
ARF1-206ENST00000473949 USP35Q9P2H5 1018 aa29.75■■■□□ 2.35
ARF1-206ENST00000473949 THSD7AQ9UPZ6 1657 aa29.75■■■□□ 2.35
ARF1-206ENST00000473949 CABP1Q9NZU7 370 aa29.74■■■□□ 2.35
ARF1-206ENST00000473949 ROCK2O75116 1388 aaKnown RBP29.74■■■□□ 2.35
ARF1-206ENST00000473949 TRPM1Q7Z4N2 1603 aa29.74■■■□□ 2.35
ARF1-206ENST00000473949 USP19O94966 1318 aa29.72■■■□□ 2.35
ARF1-206ENST00000473949 EVC2Q86UK5 1308 aa29.72■■■□□ 2.35
ARF1-206ENST00000473949 SSH2Q76I76 1423 aa29.71■■■□□ 2.35
ARF1-206ENST00000473949 SRCAPQ6ZRS2 3230 aa29.7■■■□□ 2.35
ARF1-206ENST00000473949 BRD4O60885 1362 aaPredicted RBP29.7■■■□□ 2.35
ARF1-206ENST00000473949 GCP02774 474 aa29.7■■■□□ 2.35
ARF1-206ENST00000473949 CPDO75976 1380 aa29.69■■■□□ 2.34
ARF1-206ENST00000473949 RGPD1P0DJD0 1748 aa29.68■■■□□ 2.34
ARF1-206ENST00000473949 ZBTB7CA1YPR0 619 aa29.68■■■□□ 2.34
ARF1-206ENST00000473949 USP6P35125 1406 aa29.68■■■□□ 2.34
ARF1-206ENST00000473949 CAMTA1Q9Y6Y1 1673 aa29.67■■■□□ 2.34
ARF1-206ENST00000473949 LARP1Q6PKG0 1096 aaKnown RBP29.67■■■□□ 2.34
ARF1-206ENST00000473949 NLRP6P59044 892 aa29.66■■■□□ 2.34
ARF1-206ENST00000473949 EN1Q05925 392 aaPredicted RBP29.65■■■□□ 2.34
ARF1-206ENST00000473949 LMO7Q8WWI1 1683 aa29.64■■■□□ 2.34
ARF1-206ENST00000473949 FAM196AQ6ZSG2 479 aa29.63■■■□□ 2.33
ARF1-206ENST00000473949 BARGINQ6ZT62 677 aa29.63■■■□□ 2.33
ARF1-206ENST00000473949 PDE3BQ13370 1112 aa29.62■■■□□ 2.33
ARF1-206ENST00000473949 TCP11L2Q8N4U5 519 aa29.62■■■□□ 2.33
ARF1-206ENST00000473949 PSDA5PKW4 1024 aaPredicted RBP29.59■■■□□ 2.33
ARF1-206ENST00000473949 TRIM37O94972 964 aa29.59■■■□□ 2.33
ARF1-206ENST00000473949 COL5A2P05997 1499 aaPredicted RBP29.58■■■□□ 2.33
ARF1-206ENST00000473949 TNS1Q9HBL0 1735 aaKnown RBP29.57■■■□□ 2.32
ARF1-206ENST00000473949 ZNF692Q9BU19 519 aaPredicted RBP29.57■■■□□ 2.32
ARF1-206ENST00000473949 THRAP3Q9Y2W1 955 aaKnown RBP29.57■■■□□ 2.32
ARF1-206ENST00000473949 PIK3C2AO00443 1686 aa29.56■■■□□ 2.32
ARF1-206ENST00000473949 SLIT3O75094 1523 aa29.55■■■□□ 2.32
ARF1-206ENST00000473949 DISP2A7MBM2 1401 aa29.55■■■□□ 2.32
ARF1-206ENST00000473949 EZH2Q15910 746 aaKnown RBP29.54■■■□□ 2.32
ARF1-206ENST00000473949 TTC21BQ7Z4L5 1316 aa29.53■■■□□ 2.32
ARF1-206ENST00000473949 APBA3O96018 575 aa29.53■■■□□ 2.32
ARF1-206ENST00000473949 CRB1P82279 1406 aa29.53■■■□□ 2.32
ARF1-206ENST00000473949 AATKQ6ZMQ8 1374 aa29.52■■■□□ 2.32
ARF1-206ENST00000473949 CARD11Q9BXL7 1154 aa29.52■■■□□ 2.32
ARF1-206ENST00000473949 SOX12O15370 315 aa29.51■■■□□ 2.31
ARF1-206ENST00000473949 AKAP12Q02952 1782 aa29.51■■■□□ 2.31
ARF1-206ENST00000473949 TTC21AQ8NDW8 1320 aa29.49■■■□□ 2.31
ARF1-206ENST00000473949 TOM1L2Q6ZVM7 507 aa29.49■■■□□ 2.31
ARF1-206ENST00000473949 KTN1Q86UP2 1357 aaKnown RBP29.49■■■□□ 2.31
ARF1-206ENST00000473949 TONSLQ96HA7 1378 aa29.49■■■□□ 2.31
ARF1-206ENST00000473949 R3HDM1Q15032 1099 aaKnown RBP29.48■■■□□ 2.31
ARF1-206ENST00000473949 KCNH5Q8NCM2 988 aa29.48■■■□□ 2.31
ARF1-206ENST00000473949 CAMKK2Q96RR4 588 aa29.47■■■□□ 2.31
ARF1-206ENST00000473949 LRP5O75197 1615 aa29.46■■■□□ 2.31
ARF1-206ENST00000473949 PARP4Q9UKK3 1724 aaKnown RBP29.46■■■□□ 2.31
ARF1-206ENST00000473949 CPSF1Q10570 1443 aaKnown RBP29.45■■■□□ 2.31
ARF1-206ENST00000473949 SBNO2Q9Y2G9 1366 aa29.44■■■□□ 2.3
ARF1-206ENST00000473949 AXIN2Q9Y2T1 843 aa29.44■■■□□ 2.3
ARF1-206ENST00000473949 ARHGEF25Q86VW2 580 aa29.43■■■□□ 2.3
ARF1-206ENST00000473949 COL18A1P39060 1754 aa29.43■■■□□ 2.3
ARF1-206ENST00000473949 PARD3Q8TEW0 1356 aa29.42■■■□□ 2.3
ARF1-206ENST00000473949 CSB-PGBD3P0DP91 1061 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms