RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 PSME1Q06323 249 aa24.55■■□□□ 1.52
RAB4A-202ENST00000473894 KRT28Q7Z3Y7 464 aa24.55■■□□□ 1.52
RAB4A-202ENST00000473894 HDGFL2Q7Z4V5 671 aaPredicted RBP24.54■■□□□ 1.52
RAB4A-202ENST00000473894 KTN1Q86UP2 1357 aaKnown RBP24.53■■□□□ 1.52
RAB4A-202ENST00000473894 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.52
RAB4A-202ENST00000473894 ALS2Q96Q42 1657 aa24.52■■□□□ 1.52
RAB4A-202ENST00000473894 ZNF316A6NFI3 1004 aaPredicted RBP24.51■■□□□ 1.51
RAB4A-202ENST00000473894 POLR3GLQ9BT43 218 aa24.51■■□□□ 1.51
RAB4A-202ENST00000473894 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
RAB4A-202ENST00000473894 SPATA31A3Q5VYP0 1347 aa24.5■■□□□ 1.51
RAB4A-202ENST00000473894 TNS3Q68CZ2 1445 aa24.5■■□□□ 1.51
RAB4A-202ENST00000473894 XPCQ01831 940 aaPredicted RBP24.49■■□□□ 1.51
RAB4A-202ENST00000473894 TTC21BQ7Z4L5 1316 aa24.48■■□□□ 1.51
RAB4A-202ENST00000473894 TTC21AQ8NDW8 1320 aa24.48■■□□□ 1.51
RAB4A-202ENST00000473894 CARD14Q9BXL6 1004 aa24.48■■□□□ 1.51
RAB4A-202ENST00000473894 PANK3Q9H999 370 aa24.48■■□□□ 1.51
RAB4A-202ENST00000473894 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
RAB4A-202ENST00000473894 COL22A1Q8NFW1 1626 aaPredicted RBP24.46■■□□□ 1.51
RAB4A-202ENST00000473894 ARHGEF10O15013 1369 aa24.45■■□□□ 1.5
RAB4A-202ENST00000473894 USP54Q70EL1 1684 aa24.45■■□□□ 1.5
RAB4A-202ENST00000473894 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
RAB4A-202ENST00000473894 PER1O15534 1290 aaPredicted RBP24.43■■□□□ 1.5
RAB4A-202ENST00000473894 NSD3Q9BZ95 1437 aa24.43■■□□□ 1.5
RAB4A-202ENST00000473894 PNPLA6Q8IY17 1366 aa24.42■■□□□ 1.5
RAB4A-202ENST00000473894 JCADQ9P266 1359 aa24.42■■□□□ 1.5
RAB4A-202ENST00000473894 USP31Q70CQ4 1352 aa24.42■■□□□ 1.5
RAB4A-202ENST00000473894 POTEAQ6S8J7 498 aa24.41■■□□□ 1.5
RAB4A-202ENST00000473894 MARF1Q9Y4F3 1742 aaKnown RBP24.39■■□□□ 1.5
RAB4A-202ENST00000473894 PAK3O75914 559 aaPredicted RBP24.39■■□□□ 1.49
RAB4A-202ENST00000473894 CRYBG1Q9Y4K1 1723 aa24.38■■□□□ 1.49
RAB4A-202ENST00000473894 KIF20BQ96Q89 1820 aa24.38■■□□□ 1.49
RAB4A-202ENST00000473894 ABTB2Q8N961 1025 aa24.37■■□□□ 1.49
RAB4A-202ENST00000473894 USP19O94966 1318 aa24.36■■□□□ 1.49
RAB4A-202ENST00000473894 CGNL1Q0VF96 1302 aa24.36■■□□□ 1.49
RAB4A-202ENST00000473894 FYB1O15117 783 aa24.36■■□□□ 1.49
RAB4A-202ENST00000473894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.36■■□□□ 1.493e-7■■■□□ 17.7
RAB4A-202ENST00000473894 NPC1L1Q9UHC9 1359 aa24.36■■□□□ 1.49
RAB4A-202ENST00000473894 OVOS2A0A0J9YW53 1432 aa24.35■■□□□ 1.49
RAB4A-202ENST00000473894 OVOS2Q6IE36 1432 aa24.35■■□□□ 1.49
RAB4A-202ENST00000473894 NSD2O96028 1365 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 AMER1Q5JTC6 1135 aaPredicted RBP24.34■■□□□ 1.49
RAB4A-202ENST00000473894 NLRP13Q86W25 1043 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 NME9Q86XW9 330 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 KNSTRNQ9Y448 316 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 ABCA3Q99758 1704 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 SLIT3O75094 1523 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 SPATA31A6Q5VVP1 1343 aa24.34■■□□□ 1.49
RAB4A-202ENST00000473894 ANKRD26Q9UPS8 1709 aa24.32■■□□□ 1.48
RAB4A-202ENST00000473894 DDX10Q13206 875 aaKnown RBP24.32■■□□□ 1.48
RAB4A-202ENST00000473894 NLRP6P59044 892 aa24.31■■□□□ 1.48
RAB4A-202ENST00000473894 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
RAB4A-202ENST00000473894 PHRF1Q9P1Y6 1649 aaKnown RBP24.31■■□□□ 1.48
RAB4A-202ENST00000473894 ZRANB1Q9UGI0 708 aa24.28■■□□□ 1.48
RAB4A-202ENST00000473894 NUTM2GQ5VZR2 741 aa24.27■■□□□ 1.48
RAB4A-202ENST00000473894 NFAT5O94916 1531 aa24.26■■□□□ 1.47
RAB4A-202ENST00000473894 COG3Q96JB2 828 aa24.26■■□□□ 1.47
RAB4A-202ENST00000473894 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
RAB4A-202ENST00000473894 KCNH5Q8NCM2 988 aa24.25■■□□□ 1.47
RAB4A-202ENST00000473894 GCP02774 474 aa24.24■■□□□ 1.47
RAB4A-202ENST00000473894 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
RAB4A-202ENST00000473894 CPDO75976 1380 aa24.23■■□□□ 1.47
RAB4A-202ENST00000473894 LRP6O75581 1613 aa24.23■■□□□ 1.47
RAB4A-202ENST00000473894 AATKQ6ZMQ8 1374 aa24.2■■□□□ 1.46
RAB4A-202ENST00000473894 ABCC6O95255 1503 aa24.18■■□□□ 1.46
RAB4A-202ENST00000473894 CC2D1BQ5T0F9 858 aaKnown RBP24.16■■□□□ 1.46
RAB4A-202ENST00000473894 ARHGEF25Q86VW2 580 aa24.16■■□□□ 1.46
RAB4A-202ENST00000473894 NUTM2BA6NNL0 878 aaPredicted RBP24.15■■□□□ 1.46
RAB4A-202ENST00000473894 NUTM2EB1AL46 878 aaPredicted RBP24.15■■□□□ 1.46
RAB4A-202ENST00000473894 HAP1P54257 671 aaPredicted RBP24.15■■□□□ 1.46
RAB4A-202ENST00000473894 MORC1Q86VD1 984 aa24.15■■□□□ 1.46
RAB4A-202ENST00000473894 NUTM2AQ8IVF1 878 aaPredicted RBP24.15■■□□□ 1.46
RAB4A-202ENST00000473894 PARD3Q8TEW0 1356 aa24.15■■□□□ 1.46
RAB4A-202ENST00000473894 KIAA0232Q92628 1395 aa24.15■■□□□ 1.46
RAB4A-202ENST00000473894 LTN1O94822 1766 aa24.14■■□□□ 1.46
RAB4A-202ENST00000473894 COL18A1P39060 1754 aa24.14■■□□□ 1.46
RAB4A-202ENST00000473894 COL14A1Q05707 1796 aaKnown RBP24.14■■□□□ 1.46
RAB4A-202ENST00000473894 KIF24Q5T7B8 1368 aa24.14■■□□□ 1.45
RAB4A-202ENST00000473894 MAP2P11137 1827 aaKnown RBP24.13■■□□□ 1.45
RAB4A-202ENST00000473894 LMO7Q8WWI1 1683 aa24.13■■□□□ 1.45
RAB4A-202ENST00000473894 SMG6Q86US8 1419 aaKnown RBP24.12■■□□□ 1.45
RAB4A-202ENST00000473894 ZNF772Q68DY9 489 aaPredicted RBP24.12■■□□□ 1.45
RAB4A-202ENST00000473894 FAM83GA6ND36 823 aa24.11■■□□□ 1.45
RAB4A-202ENST00000473894 ZC3H6P61129 1189 aaKnown RBP24.11■■□□□ 1.45
RAB4A-202ENST00000473894 SLIT2O94813 1529 aa24.1■■□□□ 1.45
RAB4A-202ENST00000473894 NWD2Q9ULI1 1742 aa24.1■■□□□ 1.45
RAB4A-202ENST00000473894 PLEKHG5O94827 1062 aa24.1■■□□□ 1.45
RAB4A-202ENST00000473894 ADAMTS2O95450 1211 aa24.1■■□□□ 1.45
RAB4A-202ENST00000473894 MEX3CQ5U5Q3 659 aaKnown RBP24.1■■□□□ 1.45
RAB4A-202ENST00000473894 RTL1A6NKG5 1358 aa24.1■■□□□ 1.45
RAB4A-202ENST00000473894 MAP3K19Q56UN5 1328 aa24.1■■□□□ 1.45
RAB4A-202ENST00000473894 RALBP1Q15311 655 aa24.09■■□□□ 1.45
RAB4A-202ENST00000473894 PRDM11Q9NQV5 511 aa24.09■■□□□ 1.45
RAB4A-202ENST00000473894 FBLN1P23142 703 aa24.08■■□□□ 1.45
RAB4A-202ENST00000473894 FNBP4Q8N3X1 1017 aaPredicted RBP24.08■■□□□ 1.45
RAB4A-202ENST00000473894 POLKQ9UBT6 870 aa24.08■■□□□ 1.45
RAB4A-202ENST00000473894 PLCH1Q4KWH8 1693 aa24.08■■□□□ 1.44
RAB4A-202ENST00000473894 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
RAB4A-202ENST00000473894 SOX12O15370 315 aa24.07■■□□□ 1.44
RAB4A-202ENST00000473894 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
RAB4A-202ENST00000473894 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms